RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Zbtb8aQ9CWH1 434 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Aph1cQ9DCZ9 258 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Nxt1Q9QZV9 140 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Nipsnap2O55126 281 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Camk2aP11798 478 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 CpeQ00493 476 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Rtp2Q80ZI2 223 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr1512Q8VF72 313 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Tmem205Q91XE8 189 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Glipr1Q9CWG1 255 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Naalad2Q9CZR2 740 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Lysmd1Q9D0E3 226 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm26992S4R1A3 76 aa14.28□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm4858A0A0A6YWS7 318 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Tmem200cJ3QK46 637 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Igh-1aP01865 398 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 FahP35505 419 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Tmem104Q3TB48 496 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Pgap2Q3TQR0 254 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Sema3bQ62177 748 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr1135Q7TR42 310 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Clec14aQ8VCP9 459 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Elp4Q9ER73 422 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Rnf32Q9JIT1 368 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Sema6cQ9WTM3 931 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 RttnQ8R4Y8 2226 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr1084A0A1L1STZ9 313 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Gm8225D3Z536 292 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Vmn1r11Q3SXA2 299 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Olfr3Q60879 313 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Kcmf1Q80UY2 381 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Chst14Q80V53 376 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Rspo2Q8BFU0 243 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 SbsnQ8CIT9 700 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Vmn1r23Q8R2D0 302 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Slc35b3Q922Q5 369 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Bcl2l14Q9CPT0 328 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Tnfrsf12aQ9CR75 129 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Vmn1r48Q9EQ52 302 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Fn3kQ9ER35 309 aa14.27□□□□□ -0.12
Ccdc88b-201ENSMUST00000113440 Igkv17-127A0A0G2JDN5 117 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Ankdd1aA0A1L1ST07 508 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Tmem229aB9EJI9 371 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Cdc20bD3Z3I0 519 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Dbx1P52950 335 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 NarflQ7TMW6 476 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr800Q8VFH7 311 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Dcbld2Q91ZV3 769 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Slc10a6Q9CXB2 373 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Kiaa1324A2AFS3 1009 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Mettl7a3G3X9G9 244 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 GifP52787 417 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Rhox10Q4TU83 196 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Dyrk1aQ61214 763 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 BadQ61337 204 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 DgkzQ80UP3 929 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Spem2Q8C5U4 503 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 A730049H05RikQ8C940 139 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Crtac1Q8R555 646 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 CtsjQ9R014 334 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Bex3Q9WTZ9 124 aa14.27□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Kcns2O35174 477 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr140Q60878 302 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Ly6eQ64253 130 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Slc26a11Q80ZD3 593 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Slc35f4Q8BZK4 485 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr769Q8K501 312 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr73Q920P2 313 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Q99K99 313 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Lypd2Q9DD23 127 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Btnl10Q9JK39 275 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Brca1P48754 1812 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Cacna1bO55017 2327 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 A6H6Q4 206 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Bcat2O35855 393 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 RelbQ04863 558 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 HgsnatQ3UDW8 656 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Amz2Q400C8 359 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Elavl4Q61701 385 aaKnown RBP14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 OmgQ63912 440 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 SetmarQ80UJ9 309 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Mrgpra3Q91WW3 302 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Pex13Q9D0K1 405 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr937Q9EQB4 311 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Lgals8Q9JL15 316 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Gm16368A0A1Y7VNG9 144 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Prrt1O35449 306 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Irs3O54718 495 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 AgrpP56473 131 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Jmjd8Q3TA59 316 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 1700057G04RikQ3V0U0 232 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 HpQ61646 347 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr728Q7TRM6 311 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Dleu7Q8CHZ8 209 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Mtnr1bQ8CIQ6 364 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Igkv6-29A0A0G2JEI6 115 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Sp100O35892 482 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 AhrrQ3U1U7 701 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr328Q5NCD3 310 aa14.26□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Gm5662Q8BX20 144 aa14.26□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 43 ms