RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 RSRC1Q96IZ7 334 aaKnown RBP9.07□□□□□ -0.96
NELFE-213ENST00000494956 ZNF570Q96NI8 536 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 TSSK2Q96PF2 358 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 SYT4Q9H2B2 425 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 KCNN2Q9H2S1 579 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 MS4A5Q9H3V2 200 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 POFUT1Q9H488 388 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 POLE4Q9NR33 117 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 ZNF275Q9NSD4 429 aaPredicted RBP9.07□□□□□ -0.96
NELFE-213ENST00000494956 TREM2Q9NZC2 230 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 GRHPRQ9UBQ7 328 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 SAMD4AQ9UPU9 718 aaKnown RBP9.07□□□□□ -0.96
NELFE-213ENST00000494956 COA3Q9Y2R0 106 aaPredicted RBP9.07□□□□□ -0.96
NELFE-213ENST00000494956 ARL2BPQ9Y2Y0 163 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 IER3IP1Q9Y5U9 82 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 CACNG2Q9Y698 323 aa9.07□□□□□ -0.96
NELFE-213ENST00000494956 FBN1P35555 2871 aaKnown RBP9.07□□□□□ -0.96
NELFE-213ENST00000494956 PRSS37A4D1T9 235 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 UNC119BA6NIH7 251 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 DCTN6O00399 190 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 NDUFB2O95178 105 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 PPP1R3DO95685 299 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 PTHP01270 115 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 CST2P09228 141 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 TACSTD2P09758 323 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 HSD17B1P14061 328 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 MSR1P21757 451 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 CDKN2AP42771 156 aaKnown RBP9.06□□□□□ -0.96
NELFE-213ENST00000494956 RAD52P43351 418 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 GDI2P50395 445 aaKnown RBP9.06□□□□□ -0.96
NELFE-213ENST00000494956 MXRA7P84157 204 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 KRR1Q13601 381 aaKnown RBP9.06□□□□□ -0.96
NELFE-213ENST00000494956 TSTQ16762 297 aaKnown RBP9.06□□□□□ -0.96
NELFE-213ENST00000494956 MEP1BQ16820 701 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 AVPI1Q5T686 147 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 FAM205BPQ63HN1 556 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 FAM166AQ6J272 317 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 CYP2R1Q6VVX0 501 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 ZER1Q7Z7L7 766 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.06□□□□□ -0.96
NELFE-213ENST00000494956 ABHD4Q8TB40 342 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 IPCEF1Q8WWN9 437 aaPredicted RBP9.06□□□□□ -0.96
NELFE-213ENST00000494956 C11orf40Q8WZ69 217 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 MARS2Q96GW9 593 aaKnown RBP9.06□□□□□ -0.96
NELFE-213ENST00000494956 DHRS1Q96LJ7 313 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 NSMCE2Q96MF7 247 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 LRRC37BQ96QE4 947 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 BEX2Q9BXY8 128 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 OR2J1Q9GZK6 312 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 LRMDAQ9H2I8 198 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 ANKRD19PQ9H560 264 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 GORASP2Q9H8Y8 452 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 NRIP3Q9NQ35 241 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 HINT3Q9NQE9 182 aaKnown RBP9.06□□□□□ -0.96
NELFE-213ENST00000494956 KCNS2Q9ULS6 477 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 AURKCQ9UQB9 309 aa9.06□□□□□ -0.96
NELFE-213ENST00000494956 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.06□□□□□ -0.964e-6■■■■□ 20.7
NELFE-213ENST00000494956 HTR3EA5X5Y0 456 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 ZSCAN5BA6NJL1 495 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 C17orf100A8MU93 164 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 FAM157AC9JC47 383 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 XKRYO14609 159 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 SLC16A7O60669 478 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 GMNNO75496 209 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 RP2O75695 350 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 GADD45GO95257 159 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 NR2C1P13056 603 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 ATP6V1B2P21281 511 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 SDHAP31040 664 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 RRM2P31350 389 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 GPR6P46095 362 aaPredicted RBP9.05□□□□□ -0.96
NELFE-213ENST00000494956 CHN2P52757 468 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 PPP1CBP62140 327 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 MVKQ03426 396 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 PPP1R8Q12972 351 aaKnown RBP9.05□□□□□ -0.96
NELFE-213ENST00000494956 ANKDD1AQ495B1 522 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 SAMD4BQ5PRF9 694 aaKnown RBP9.05□□□□□ -0.96
NELFE-213ENST00000494956 FAM120AOSQ5T036 256 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 ZNF771Q7L3S4 317 aaPredicted RBP9.05□□□□□ -0.96
NELFE-213ENST00000494956 FITM2Q8N6M3 262 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 ZNF540Q8NDQ6 660 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 CLDND2Q8NHS1 167 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 RDH5Q92781 318 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 BCL2L14Q9BZR8 327 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 NUAK2Q9H093 628 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 SHARPINQ9H0F6 387 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 C1orf198Q9H425 327 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 FN3KQ9H479 309 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 LPAR2Q9HBW0 351 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 MAGEL2Q9UJ55 1249 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 FBXO9Q9UK97 447 aaPredicted RBP9.05□□□□□ -0.96
NELFE-213ENST00000494956 TMEM5Q9Y2B1 443 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 TIMM10BQ9Y5J6 103 aa9.05□□□□□ -0.96
NELFE-213ENST00000494956 ANK3Q12955 4377 aaKnown RBP9.05□□□□□ -0.96
NELFE-213ENST00000494956 PPIHO43447 177 aaKnown RBP9.04□□□□□ -0.96
NELFE-213ENST00000494956 SPRY3O43610 288 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 DOK2O60496 412 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 IGHV1-46P01743 117 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 FABP3P05413 133 aa9.04□□□□□ -0.96
NELFE-213ENST00000494956 DBHP09172 617 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms