RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 ETS2P15036 469 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 HTR2AP28223 471 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 EPHA3P29320 983 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 TGFBR2P37173 567 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 RBMXP38159 391 aaKnown RBP6.37□□□□□ -1.39
PDPN-205ENST00000487038 IER3P46695 156 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 RGS8P57771 180 aaPredicted RBP6.37□□□□□ -1.39
PDPN-205ENST00000487038 EGR3Q06889 387 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 ZNF404Q494X3 552 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 TMEM255AQ5JRV8 349 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 CD276Q5ZPR3 534 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 C11orf88Q6PI97 169 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 LRFN4Q6PJG9 635 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 NHLRC1Q6VVB1 395 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 DCDC5Q6ZRR9 648 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 KRT73Q86Y46 540 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 NUDCD3Q8IVD9 361 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 IFT20Q8IY31 132 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 PNLDC1Q8NA58 520 aaKnown RBP6.37□□□□□ -1.39
PDPN-205ENST00000487038 SPERTQ8NA61 448 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 OR4S1Q8NGB4 309 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 UBLCP1Q8WVY7 318 aaPredicted RBP6.37□□□□□ -1.39
PDPN-205ENST00000487038 C4orf45Q96LM5 186 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 COG8Q96MW5 612 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 WWC2-AS2Q96NR7 200 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 RMND5AQ9H871 391 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 SIAEQ9HAT2 523 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 TPT1P8Q9HAU6 139 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 BCL2L10Q9HD36 194 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 GCM1Q9NP62 436 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 NANSQ9NR45 359 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 VPREB3Q9UKI3 123 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 NDRG4Q9ULP0 352 aaKnown RBP6.37□□□□□ -1.39
PDPN-205ENST00000487038 SACSQ9NZJ4 4579 aa6.37□□□□□ -1.39
PDPN-205ENST00000487038 RYR2Q92736 4967 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 LOC100509620A0A075B734 347 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 IGHV1-69DA0A0B4J2H0 117 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 CENPVL3A0A0U1RRI6 287 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 ZNF816-ZNF321PA0A0X1KG74 233 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 A0A1W2PRG6 482 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 ANKRD61A6NGH8 418 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 ZNF879B4DU55 563 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 GPR37O15354 613 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 FSTL3O95633 263 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 IGHV1-69P01742 117 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 HIST1H2ABP04908 130 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 IL6P05231 212 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 FBP1P09467 338 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 ZCCHC18P0CG32 403 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 THRBP10828 461 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 UMPSP11172 480 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 KITLGP21583 273 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 CFHR2P36980 270 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 GUCA1AP43080 201 aaPredicted RBP6.36□□□□□ -1.39
PDPN-205ENST00000487038 SRP9P49458 86 aaKnown RBP6.36□□□□□ -1.39
PDPN-205ENST00000487038 DAP3P51398 398 aaKnown RBP6.36□□□□□ -1.39
PDPN-205ENST00000487038 MVDP53602 400 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 NME5P56597 212 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 PCBD1P61457 104 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 UFM1P61960 85 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 ERVK-25P63136 954 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 MRPS34P82930 218 aaKnown RBP6.36□□□□□ -1.39
PDPN-205ENST00000487038 GUCY1A3Q02108 690 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 PSG7Q13046 419 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 FADDQ13158 208 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 OR1Q1Q15612 314 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 HIST3H3Q16695 136 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 ZNF181Q2M3W8 571 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 C10orf128Q5T292 105 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 WDR25Q64LD2 544 aaPredicted RBP6.36□□□□□ -1.39
PDPN-205ENST00000487038 HIST3H2AQ7L7L0 130 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 NANOGNBQ7Z5D8 188 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 ZNF781Q8N8C0 355 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 AKR7LQ8NHP1 331 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 ZNF420Q8TAQ5 688 aaPredicted RBP6.36□□□□□ -1.39
PDPN-205ENST00000487038 TCP10LQ8TDR4 215 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 EPS8L3Q8TE67 593 aaKnown RBP6.36□□□□□ -1.39
PDPN-205ENST00000487038 ANP32BQ92688 251 aaKnown RBP6.36□□□□□ -1.39
PDPN-205ENST00000487038 HIST1H2ACQ93077 130 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 TECTBQ96PL2 329 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 ZNF347Q96SE7 839 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 TMEM246Q9BRR3 403 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 SMURF2Q9HAU4 748 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 TMEM165Q9HC07 324 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 SLCO1B3Q9NPD5 702 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 TBCCD1Q9NVR7 557 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 SLC17A7Q9P2U7 560 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 ZNF229Q9UJW7 825 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 FAM96BQ9Y3D0 163 aa6.36□□□□□ -1.39
PDPN-205ENST00000487038 PRORSD1PA6NEY8 169 aa6.35□□□□□ -1.39
PDPN-205ENST00000487038 CHP2O43745 196 aa6.35□□□□□ -1.39
PDPN-205ENST00000487038 FMO6PO60774 539 aa6.35□□□□□ -1.39
PDPN-205ENST00000487038 CYB5R3P00387 301 aaPredicted RBP6.35□□□□□ -1.39
PDPN-205ENST00000487038 SHBGP04278 402 aa6.35□□□□□ -1.39
PDPN-205ENST00000487038 BPGMP07738 259 aa6.35□□□□□ -1.39
PDPN-205ENST00000487038 RPL14P50914 215 aaKnown RBP6.35□□□□□ -1.39
PDPN-205ENST00000487038 ZNF133P52736 654 aaPredicted RBP6.35□□□□□ -1.39
PDPN-205ENST00000487038 CDH12P55289 794 aa6.35□□□□□ -1.39
PDPN-205ENST00000487038 PSG4Q00888 419 aa6.35□□□□□ -1.39
PDPN-205ENST00000487038 CD47Q08722 323 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms