RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 LILRA5A6NI73 299 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 HOXB3P14651 431 aaPredicted RBP13.43□□□□□ -0.26
PTPRU-205ENST00000460170 PLA2G7Q13093 441 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 SLC17A1Q14916 467 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 PEA15Q15121 130 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 LPCAT3Q6P1A2 487 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 CORO6Q6QEF8 472 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 ZNF813Q6ZN06 617 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 DOK3Q7L591 496 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 RPP25Q9BUL9 199 aaKnown RBP13.43□□□□□ -0.26
PTPRU-205ENST00000460170 PLA2G2FQ9BZM2 168 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 TCEAL2Q9H3H9 227 aaPredicted RBP13.43□□□□□ -0.26
PTPRU-205ENST00000460170 MED6O75586 246 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 ALX3O95076 343 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 TRIM61Q5EBN2 209 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 OR5M1Q8NGP8 315 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 UCN3Q969E3 161 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 CYSLTR2Q9NS75 346 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 RAB6AP20340 208 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 FGL2Q14314 439 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 VN1R4Q7Z5H5 301 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 SVBPQ8N300 66 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 OR1M1Q8NGA1 313 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 ZNF764Q96H86 408 aaPredicted RBP13.43□□□□□ -0.26
PTPRU-205ENST00000460170 DERL3Q96Q80 235 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 SIGLEC11Q96RL6 698 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 C20orf141Q9NUB4 165 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 ASH2LQ9UBL3 628 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 SLC22A13Q9Y226 551 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 MCRIP1C9JLW8 97 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 BET1O15155 118 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 VAMP5O95183 116 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 CD46P15529 392 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 STK11Q15831 433 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 FBXW12Q6X9E4 464 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 ORAI1Q96D31 301 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 CDCP1Q9H5V8 836 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 LRFN1Q9P244 771 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 A0A1W2PS29 197 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 ANKRD34BA5PLL1 514 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 GPR137BO60478 399 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 NPY4RP50391 375 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 EMP3P54852 163 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 ZNF628Q5EBL2 1059 aa13.43□□□□□ -0.26
PTPRU-205ENST00000460170 MAML2Q8IZL2 1156 aaPredicted RBP13.43□□□□□ -0.26
PTPRU-205ENST00000460170 TEX51A0A1B0GUA7 166 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 GABRG1Q8N1C3 465 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 LRRC61Q9BV99 259 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 BANF2Q9H503 90 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 ING1Q9UK53 422 aaPredicted RBP13.42□□□□□ -0.26
PTPRU-205ENST00000460170 COL11A1P12107 1806 aaPredicted RBP13.42□□□□□ -0.26
PTPRU-205ENST00000460170 LMO7DNF2Z398 122 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 ZIC1Q15915 447 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 TMUB2Q71RG4 321 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 GLCCI1Q86VQ1 547 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 OR51E1Q8TCB6 317 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 SMIM4Q8WVI0 70 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 ZNF285Q96NJ3 590 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 EDARQ9UNE0 448 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 PIGLQ9Y2B2 252 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 RP1L1Q8IWN7 2480 aaPredicted RBP13.42□□□□□ -0.26
PTPRU-205ENST00000460170 TMEM235A6NFC5 223 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 TMEM127O75204 238 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 ABHD16AO95870 558 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 GLB1P16278 677 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 C2orf76Q3KRA6 126 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 OR4C3Q8NH37 302 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 RNF170Q96K19 258 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 JAM3Q9BX67 310 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 AUNIPQ9H7T9 357 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 ERVMER34-1Q9H9K5 563 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 MED29Q9NX70 200 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 B3GALT5Q9Y2C3 310 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 NINQ8N4C6 2090 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 ARPC4-TTLL3A0A0A6YYG9 625 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 QDPRP09417 244 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 ZNF728P0DKX0 622 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 APEHP13798 732 aaKnown RBP13.42□□□□□ -0.26
PTPRU-205ENST00000460170 GALP22466 123 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 RAD52P43351 418 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 THEM4Q5T1C6 240 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 NAXDQ8IW45 347 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 FAM71CQ8NEG0 241 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 OR52N5Q8NH56 324 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 SCARB1Q8WTV0 552 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 RBPMSQ93062 196 aaKnown RBP13.42□□□□□ -0.26
PTPRU-205ENST00000460170 MOB1AQ9H8S9 216 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 DNAJB11Q9UBS4 358 aa13.42□□□□□ -0.26
PTPRU-205ENST00000460170 A0A1W2PNR3 127 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 ZNF780AO75290 641 aaPredicted RBP13.41□□□□□ -0.26
PTPRU-205ENST00000460170 LUMP51884 338 aaPredicted RBP13.41□□□□□ -0.26
PTPRU-205ENST00000460170 PRSS35Q8N3Z0 413 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 ESX1Q8N693 406 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 PXT1Q8NFP0 134 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 ANKRD10Q9NXR5 420 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 FLVCR2Q9UPI3 526 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 TCN2P20062 427 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 MSR1P21757 451 aa13.41□□□□□ -0.26
PTPRU-205ENST00000460170 RPL35P42766 123 aaKnown RBP13.41□□□□□ -0.26
PTPRU-205ENST00000460170 HYAL1Q12794 435 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms