RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 ACKR4Q9NPB9 350 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 GLTPQ9NZD2 209 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 SPRR3Q9UBC9 169 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 FLVCR1Q9Y5Y0 555 aa10.82□□□□□ -0.68
SPTBN1-203ENST00000389980 DOCK7Q96N67 2140 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 SMIM30A4D0T7 59 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 GABRPO00591 440 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 TFECO14948 347 aaPredicted RBP10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 PLPP2O43688 288 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 ZNF432O94892 652 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 EDNRAP25101 427 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 CSNK1A1P48729 337 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 BLVRAP53004 296 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 NANOS3P60323 173 aaKnown RBP10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 MXD1Q05195 221 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 RASGEF1BQ0VAM2 473 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 EIF2B1Q14232 305 aaKnown RBP10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 PDSS1Q5T2R2 415 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 LIPNQ5VXI9 398 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 DMKNQ6E0U4 476 aaPredicted RBP10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 ABLIM2Q6H8Q1 611 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 TMEM91Q6ZNR0 172 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 ASB18Q6ZVZ8 466 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 HDDC2Q7Z4H3 204 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 IQCF2Q8IXL9 164 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 TMEM123Q8N131 208 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 GHSRQ92847 366 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 PGLYRP3Q96LB9 341 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 PDCD1LG2Q9BQ51 273 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 ABHD6Q9BV23 337 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 SF3B5Q9BWJ5 86 aaKnown RBP10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 MMP27Q9H306 513 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 TIGARQ9NQ88 270 aa10.81□□□□□ -0.68
SPTBN1-203ENST00000389980 TRGV5A0A0B4J1U4 118 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 UPK3AO75631 287 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 AQP8O94778 261 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 ABHD16AO95870 558 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 KRT8P05787 483 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 CLEC2LP0C7M8 214 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 ZNF823P16415 610 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 LAP3P28838 519 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 CD40LGP29965 261 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 RPS19P39019 145 aaKnown RBP10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 CDK5R1Q15078 307 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 C6orf183Q5T699 404 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 CD200R1LQ6Q8B3 271 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 GDPGP1Q6ZNW5 385 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 AKAP14Q86UN6 197 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 ZADH2Q8N4Q0 377 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 MEIOBQ8N635 442 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 FNDC9Q8TBE3 224 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 ZNF837Q96EG3 531 aaPredicted RBP10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 ZNF486Q96H40 463 aaPredicted RBP10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 POLE4Q9NR33 117 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 SNTG1Q9NSN8 517 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 TMEM14AQ9Y6G1 99 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 TRBV2A0A0J9YWF9 115 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 TRDV1A0A1B0GX56 115 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 OGG1O15527 345 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 CYTIPO60759 359 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 HLA-DPB1P04440 258 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 GDI2P50395 445 aaKnown RBP10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 TAS2R43P59537 309 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 GPR50Q13585 617 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 FAM27D1Q5T7N8 215 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 SLC18B1Q6NT16 456 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 DCXRQ7Z4W1 244 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 TMEM54Q969K7 222 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 MRPL48Q96GC5 212 aaKnown RBP10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 MED30Q96HR3 178 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 PPIL3Q9H2H8 161 aaKnown RBP10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 ELOVL3Q9HB03 270 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 NPAP1Q9NZP6 1156 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 CCDC59Q9P031 241 aaKnown RBP10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 KLHL9Q9P2J3 617 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 CRNNQ9UBG3 495 aaPredicted RBP10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 CLEC4AQ9UMR7 237 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 SSUH2Q9Y2M2 353 aa10.8□□□□□ -0.68
SPTBN1-203ENST00000389980 GTF3C1Q12789 2109 aa10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 MED12LQ86YW9 2145 aa10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 SHISA3A0PJX4 238 aa10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 CTDSP2O14595 271 aa10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 CDRT1O95170 752 aa10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 SDC2P34741 201 aa10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 SF3B4Q15427 424 aaKnown RBP eCLIP10.79□□□□□ -0.682e-6■■■■□ 24
SPTBN1-203ENST00000389980 RPL22L1Q6P5R6 122 aaKnown RBP10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 FAM220AQ7Z4H9 259 aa10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 SMIM19Q96E16 107 aa10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 OR8B4Q96RC9 309 aa10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 TAAR6Q96RI8 345 aa10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 MNTQ99583 582 aa10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 TTYH2Q9BSA4 534 aa10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 BARHL1Q9BZE3 327 aa10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 ABCB10Q9NRK6 738 aa10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 FOXD3Q9UJU5 478 aaPredicted RBP10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 CAMK2AQ9UQM7 478 aa10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 A0A1W2PPK0 400 aa10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 H3BSH0 61 aa10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 RGS9O75916 674 aaPredicted RBP10.79□□□□□ -0.68
SPTBN1-203ENST00000389980 TACSTD2P09758 323 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms