RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 C2CD3Q4AC94 2353 aa16.3■□□□□ 0.2
PNKP-224ENST00000631020 PRR14LQ5THK1 2151 aa16.3■□□□□ 0.2
PNKP-224ENST00000631020 IGLV1-36A0A0B4J1U3 117 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 A0A1W2PPR1 153 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 IFNGP01579 166 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 CLUP10909 449 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 NR2C1P13056 603 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 TGFBR3Q03167 851 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 ZBTB46Q86UZ6 589 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 OR9Q1Q8NGQ5 310 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 S100PBPQ96BU1 408 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 BOD1Q96IK1 185 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 FOXN4Q96NZ1 517 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 FOXB1Q99853 325 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 TMUB1Q9BVT8 246 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 TMEM38BQ9NVV0 291 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 COA3Q9Y2R0 106 aaPredicted RBP16.29■□□□□ 0.2
PNKP-224ENST00000631020 A0A096LPE4 126 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 A0A1W2PPZ6 126 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 FAM171A2A8MVW0 826 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 SLC16A6O15403 523 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 SIAH2O43255 324 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 SCG5P05408 212 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 GYPBP06028 91 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 ZNF3P17036 446 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 IL32P24001 234 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 GGT2P36268 569 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 SH3BGRP55822 239 aaPredicted RBP16.29■□□□□ 0.2
PNKP-224ENST00000631020 HIKESHIQ53FT3 197 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 ANKRD16Q6P6B7 361 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 CPOQ8IVL8 374 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 C1orf162Q8NEQ5 155 aaPredicted RBP16.29■□□□□ 0.2
PNKP-224ENST00000631020 STEAP2Q8NFT2 490 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 SLC38A2Q96QD8 506 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 PITX2Q99697 317 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 TEX12Q9BXU0 123 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 ACTR6Q9GZN1 396 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 HINT3Q9NQE9 182 aaKnown RBP16.29■□□□□ 0.2
PNKP-224ENST00000631020 BEX4Q9NWD9 120 aaPredicted RBP16.29■□□□□ 0.2
PNKP-224ENST00000631020 FKBP7Q9Y680 259 aa16.29■□□□□ 0.2
PNKP-224ENST00000631020 VPS13CQ709C8 3753 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 SETD2Q9BYW2 2564 aaPredicted RBP16.28■□□□□ 0.2
PNKP-224ENST00000631020 LOC100130705A0A1B0GUX0 176 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 KHDRBS3O75525 346 aaKnown RBP16.28■□□□□ 0.2
PNKP-224ENST00000631020 MPZL1O95297 269 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 GPANK1O95872 356 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 B4GALT1P15291 398 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 CD53P19397 219 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 CRABP1P29762 137 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 PYCR1P32322 319 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 ZNF84P51523 738 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 SLC25A1P53007 311 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 TBRG1Q3YBR2 411 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 OR7E24Q6IFN5 339 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 PLBD1Q6P4A8 553 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 ZNF813Q6ZN06 617 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 FOXL2NBQ6ZUU3 175 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 TCEANCQ8N8B7 351 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 WDR31Q8NA23 367 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 NABP1Q96AH0 204 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 PLEKHA8Q96JA3 519 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 IL4I1Q96RQ9 567 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 FAM192AQ9GZU8 254 aa16.28■□□□□ 0.2
PNKP-224ENST00000631020 A0A1W2PR80 420 aa16.27■□□□□ 0.2
PNKP-224ENST00000631020 OR5H1A6NKK0 313 aa16.27■□□□□ 0.2
PNKP-224ENST00000631020 TLX2O43763 284 aaPredicted RBP16.27■□□□□ 0.2
PNKP-224ENST00000631020 CD99P14209 185 aa16.27■□□□□ 0.2
PNKP-224ENST00000631020 SPI1P17947 270 aa16.27■□□□□ 0.2
PNKP-224ENST00000631020 ADARB1P78563 741 aaKnown RBP16.27■□□□□ 0.2
PNKP-224ENST00000631020 MRPS34P82930 218 aaKnown RBP16.27■□□□□ 0.2
PNKP-224ENST00000631020 OTPQ5XKR4 325 aa16.27■□□□□ 0.2
PNKP-224ENST00000631020 KLHL24Q6TFL4 600 aa16.27■□□□□ 0.2
PNKP-224ENST00000631020 BCDIN3DQ7Z5W3 292 aaKnown RBP16.27■□□□□ 0.2
PNKP-224ENST00000631020 SKA3Q8IX90 412 aa16.27■□□□□ 0.2
PNKP-224ENST00000631020 SLC22A24Q8N4F4 322 aa16.27■□□□□ 0.2
PNKP-224ENST00000631020 BBS1Q8NFJ9 593 aa16.27■□□□□ 0.2
PNKP-224ENST00000631020 OR51L1Q8NGJ5 315 aa16.27■□□□□ 0.2
PNKP-224ENST00000631020 OTULINQ96BN8 352 aa16.27■□□□□ 0.2
PNKP-224ENST00000631020 RACGAP1Q9H0H5 632 aa16.27■□□□□ 0.2
PNKP-224ENST00000631020 SEC61A2Q9H9S3 476 aa16.27■□□□□ 0.2
PNKP-224ENST00000631020 SLC17A5Q9NRA2 495 aa16.27■□□□□ 0.2
PNKP-224ENST00000631020 GMPPBQ9Y5P6 360 aa16.27■□□□□ 0.2
PNKP-224ENST00000631020 FLNAP21333 2647 aaKnown RBP16.27■□□□□ 0.19
PNKP-224ENST00000631020 RAI1Q7Z5J4 1906 aaPredicted RBP16.26■□□□□ 0.19
PNKP-224ENST00000631020 A0A1W2PPL8 197 aa16.26■□□□□ 0.19
PNKP-224ENST00000631020 ZNF503-AS2A6NEH8 195 aa16.26■□□□□ 0.19
PNKP-224ENST00000631020 PRR23D1E9PI22 279 aaPredicted RBP16.26■□□□□ 0.19
PNKP-224ENST00000631020 THBDP07204 575 aa16.26■□□□□ 0.19
PNKP-224ENST00000631020 PRR23D2P0DMB1 279 aaPredicted RBP16.26■□□□□ 0.19
PNKP-224ENST00000631020 LAP3P28838 519 aa16.26■□□□□ 0.19
PNKP-224ENST00000631020 AQP4P55087 323 aa16.26■□□□□ 0.19
PNKP-224ENST00000631020 TAB1Q15750 504 aa16.26■□□□□ 0.19
PNKP-224ENST00000631020 SGCAQ16586 387 aa16.26■□□□□ 0.19
PNKP-224ENST00000631020 CXXC5Q7LFL8 322 aaKnown RBP16.26■□□□□ 0.19
PNKP-224ENST00000631020 GLB1L2Q8IW92 636 aa16.26■□□□□ 0.19
PNKP-224ENST00000631020 DHRSXQ8N5I4 330 aa16.26■□□□□ 0.19
PNKP-224ENST00000631020 OR2T4Q8NH00 348 aa16.26■□□□□ 0.19
PNKP-224ENST00000631020 FGFBP3Q8TAT2 258 aa16.26■□□□□ 0.19
PNKP-224ENST00000631020 FAM81AQ8TBF8 368 aa16.26■□□□□ 0.19
PNKP-224ENST00000631020 TMEM163Q8TC26 289 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms