RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 FABP3P05413 133 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 FOLR1P15328 257 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 ZNF250P15622 560 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 ZNF32P17041 273 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 EIF2S2P20042 333 aaKnown RBP2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 MAGP20916 626 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 OTX1P32242 354 aaPredicted RBP2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 CDKN2BP42772 138 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 DMTNQ08495 405 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 MADCAM1Q13477 382 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 POU2AF1Q16633 256 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 DEFB116Q30KQ4 102 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 TFDP3Q5H9I0 405 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 THEM4Q5T1C6 240 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 CENPQQ7L2Z9 268 aaPredicted RBP2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 C12orf56Q8IXR9 622 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 GTPBP8Q8N3Z3 284 aaPredicted RBP2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 CCDC148Q8NFR7 591 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 ELMO1Q92556 727 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 CREB3L1Q96BA8 519 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 CHP1Q99653 195 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 PARP12Q9H0J9 701 aaKnown RBP2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 NOX3Q9HBY0 568 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 NEK6Q9HC98 313 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 SLC40A1Q9NP59 571 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 KCNJ16Q9NPI9 418 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 FAM49BQ9NUQ9 324 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 DDX18Q9NVP1 670 aaKnown RBP2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 MRPS18BQ9Y676 258 aaKnown RBP2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 MAPK8IP3Q9UPT6 1336 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 AKNAQ7Z591 1439 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 IGKV2D-24A0A075B6R9 120 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 IGHV3-66A0A0C4DH42 116 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 TCP11X1B4DZS4 312 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 INS-IGF2F8WCM5 200 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 L7N2F9 121 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 M0QX08 132 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 AIREO43918 545 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 CLPXO76031 633 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 SRP72O76094 671 aaKnown RBP2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 SERPINA5P05154 406 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 GNAO1P09471 354 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 PABPC4LP0CB38 370 aaKnown RBP2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 PRPS2P11908 318 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 CCNB1P14635 433 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 SLC1A1P43005 524 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 C21orf59P57076 290 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 RGS8P57771 180 aaPredicted RBP2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 ZSCAN26Q16670 478 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 PPM1LQ5SGD2 360 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 PRAMEF20Q5VT98 475 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 ZFP2Q6ZN57 461 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 Q6ZSR3 168 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 SLC16A14Q7RTX9 510 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 STPG2Q8N412 459 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 FAM81AQ8TBF8 368 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 MCUR1Q96AQ8 359 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 WFIKKN1Q96NZ8 548 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 C20orf24Q9BUV8 137 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 SLC25A2Q9BXI2 301 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 OR51M1Q9H341 326 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 CLSTN2Q9H4D0 955 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 ISYNA1Q9NPH2 558 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 CFAP45Q9UL16 551 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 PSG11Q9UQ72 335 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 TMEM94Q12767 1356 aa2.87□□□□□ -1.95
SMNDC1-205ENST00000477763 LRRIQ4A6NIV6 560 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 H0YIV9 168 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 SIRPB1O00241 398 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 DFNA5O60443 496 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 DPM1O60762 260 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 GABARAPO95166 117 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 TSPAN13O95857 204 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 RHOXF2BP0C7M4 288 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 RAB3BP20337 219 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 F2RP25116 425 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 CEACAM6P40199 344 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 AQP2P41181 271 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 NAMPTP43490 491 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 RPS9P46781 194 aaKnown RBP2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 CD151P48509 253 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 CX3CR1P49238 355 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 PFN3P60673 137 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 RAB10P61026 200 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 TGM3Q08188 693 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 ERCC8Q13216 396 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 LRRC66Q68CR7 880 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 C22orf42Q6IC83 251 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 REEP3Q6NUK4 255 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 FAM92BQ6ZTR7 304 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 OR52K1Q8NGK4 314 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 OR4A4PQ8NGN8 299 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 DNAJC1Q96KC8 554 aaKnown RBP2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 TGS1Q96RS0 853 aaKnown RBP2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 RHOXF2Q9BQY4 288 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 PATZ1Q9HBE1 687 aaKnown RBP2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 CRLF2Q9HC73 371 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 HRASLS2Q9NWW9 162 aa2.86□□□□□ -1.95
SMNDC1-205ENST00000477763 RAB20Q9NX57 234 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms