RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 GABARAPL3Q9BY60 117 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 UFSP2Q9NUQ7 469 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 MCTS1Q9ULC4 181 aaKnown RBP11.05□□□□□ -0.64
UBR4-205ENST00000417040 U3KQ87 197 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 MYO18AQ92614 2054 aaKnown RBP11.05□□□□□ -0.64
UBR4-205ENST00000417040 IGHV3-20A0A0C4DH32 117 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 CDC20Q12834 499 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 SEMA3BQ13214 749 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 FAM71CQ8NEG0 241 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 OR5M8Q8NGP6 311 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 TSSK2Q96PF2 358 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 NEURL2Q9BR09 285 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 RNF186Q9NXI6 227 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 MUTYHQ9UIF7 546 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 DNAJC25-GNG10A0A024R161 153 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 TRIM77I1YAP6 450 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 MRPL33O75394 65 aaKnown RBP11.05□□□□□ -0.64
UBR4-205ENST00000417040 H2AFB1P0C5Y9 115 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 PRTGQ2VWP7 1150 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 GABARAPL1Q9H0R8 117 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 KLK11Q9UBX7 282 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 ADAM29Q9UKF5 820 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 KPTNQ9Y664 436 aa11.05□□□□□ -0.64
UBR4-205ENST00000417040 CD3DP04234 171 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 SLC48A1Q6P1K1 146 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 SLC35A4Q96G79 324 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 AKR1E2Q96JD6 320 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 PLA2G12AQ9BZM1 189 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 SLC25A32Q9H2D1 315 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 ING1Q9UK53 422 aaPredicted RBP11.04□□□□□ -0.64
UBR4-205ENST00000417040 FBXO4Q9UKT5 387 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 ZNF354AO60765 605 aaPredicted RBP11.04□□□□□ -0.64
UBR4-205ENST00000417040 CD1EP15812 388 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 MFAP5Q13361 173 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 OR51E1Q8TCB6 317 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 STT3BQ8TCJ2 826 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 KCNJ15Q99712 375 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 RGPD5Q99666 1765 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 ZAR1LA6NP61 321 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 RNF212BA8MTL3 300 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 SLC31A2O15432 143 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 PGFP49763 221 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 LIM2P55344 173 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 MORN1Q5T089 497 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 OR4F5Q8NH21 305 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 FBXW5Q969U6 566 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 OR4F4Q96R69 305 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 LOXHD1Q8IVV2 1947 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 LRRC37A3O60309 1634 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 MBLAC1A4D2B0 266 aaPredicted RBP11.04□□□□□ -0.64
UBR4-205ENST00000417040 TMEM200CA6NKL6 621 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 ASCL1P50553 236 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 CSNK1G2P78368 415 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 LIPNQ5VXI9 398 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 MFSD12Q6NUT3 480 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 RPUSD3Q6P087 351 aaKnown RBP11.04□□□□□ -0.64
UBR4-205ENST00000417040 C15orf54Q8N8G6 183 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 RXFP4Q8TDU9 374 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 GAREM1Q9H706 876 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 A0A087WUU8 490 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 LRP5LA4QPB2 252 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 TIMM8AO60220 97 aaPredicted RBP11.04□□□□□ -0.64
UBR4-205ENST00000417040 GRPP07492 148 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 SBK2P0C263 348 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 TRAPPC2P0DI81 140 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 TRAPPC2BP0DI82 140 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 IAPPP10997 89 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 PTHLHP12272 177 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 PIPP12273 146 aaPredicted RBP11.04□□□□□ -0.64
UBR4-205ENST00000417040 TEKQ02763 1124 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 MFSD4AQ8N468 514 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 TIMM29Q9BSF4 260 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 HIPK2Q9H2X6 1198 aa11.04□□□□□ -0.64
UBR4-205ENST00000417040 DNMT3BQ9UBC3 853 aaKnown RBP11.04□□□□□ -0.64
UBR4-205ENST00000417040 TPOP07202 933 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 OR4E1P0C645 316 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 HRH1P35367 487 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 EDDM3AQ14507 147 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 CTF1Q16619 201 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 ZNF620Q6ZNG0 422 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 NAXDQ8IW45 347 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 OR5AS1Q8N127 324 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 RPUSD4Q96CM3 377 aaKnown RBP11.03□□□□□ -0.64
UBR4-205ENST00000417040 DHRS9Q9BPW9 319 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 P2RY12Q9H244 342 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 LMAN1LQ9HAT1 526 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 CREBZFQ9NS37 354 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 PLEKHB1Q9UF11 243 aaPredicted RBP11.03□□□□□ -0.64
UBR4-205ENST00000417040 TMEM129A0AVI4 362 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 UNCXA6NJT0 531 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 HYAL3O43820 417 aaPredicted RBP11.03□□□□□ -0.64
UBR4-205ENST00000417040 KLKB1P03952 638 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 ETV6P41212 452 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 EVX1P49640 407 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 NUDCD2Q8WVJ2 157 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 SLC6A18Q96N87 628 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 SCML1Q9UN30 329 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 PLSCR5A0PG75 271 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 HCRTR1O43613 425 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 TRAF3IP2O43734 574 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms