RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ADGRG7Q96K78 797 aa11.41□□□□□ -0.58
DDX39A-202ENST00000324340 KLHL15Q96M94 604 aa11.41□□□□□ -0.58
DDX39A-202ENST00000324340 DCBLD2Q96PD2 775 aa11.41□□□□□ -0.58
DDX39A-202ENST00000324340 TSPAN32Q96QS1 320 aa11.41□□□□□ -0.58
DDX39A-202ENST00000324340 DDOQ99489 341 aa11.41□□□□□ -0.58
DDX39A-202ENST00000324340 CLEC4MQ9H2X3 399 aaPredicted RBP11.41□□□□□ -0.58
DDX39A-202ENST00000324340 IFT22Q9H7X7 185 aa11.41□□□□□ -0.58
DDX39A-202ENST00000324340 ZDHHC11Q9H8X9 412 aa11.41□□□□□ -0.58
DDX39A-202ENST00000324340 HINT3Q9NQE9 182 aaKnown RBP11.41□□□□□ -0.58
DDX39A-202ENST00000324340 MRPS18AQ9NVS2 196 aaKnown RBP11.41□□□□□ -0.58
DDX39A-202ENST00000324340 DNAJC27Q9NZQ0 273 aa11.41□□□□□ -0.58
DDX39A-202ENST00000324340 GPR52Q9Y2T5 361 aa11.41□□□□□ -0.58
DDX39A-202ENST00000324340 ADAM18Q9Y3Q7 739 aa11.41□□□□□ -0.58
DDX39A-202ENST00000324340 RPL36Q9Y3U8 105 aaKnown RBP11.41□□□□□ -0.58
DDX39A-202ENST00000324340 ZNF175Q9Y473 711 aa11.41□□□□□ -0.58
DDX39A-202ENST00000324340 SESN1Q9Y6P5 492 aa11.41□□□□□ -0.58
DDX39A-202ENST00000324340 A0A087WV48 116 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 A0A0J9YW62 118 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 LOC102725191A0A1B0GVB3 256 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 FAM240BA0A1B0GVZ2 78 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 RPS10-NUDT3A0A1W2PQS6 291 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 MED19A0JLT2 244 aaPredicted RBP11.4□□□□□ -0.59
DDX39A-202ENST00000324340 C7orf66A4D0T2 115 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 FAM166BA8MTA8 275 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 SULT2B1O00204 365 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 LYRM1O43325 122 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 OR6A2O95222 327 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 OPN1LWP04000 364 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 F13BP05160 661 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 CELA3AP09093 270 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 HIST1H1CP16403 213 aaKnown RBP11.4□□□□□ -0.59
DDX39A-202ENST00000324340 ZNF3P17036 446 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 RFC3P40938 356 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 RAG2P55895 527 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 ERVK-25P63136 954 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 CSNK2A1P68400 391 aaPredicted RBP11.4□□□□□ -0.59
DDX39A-202ENST00000324340 C1DQ13901 141 aaKnown RBP11.4□□□□□ -0.59
DDX39A-202ENST00000324340 CD276Q5ZPR3 534 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 PAQR6Q6TCH4 344 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 NHLRC1Q6VVB1 395 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 Q6ZS92 163 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 ESPNLQ6ZVH7 1005 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 CXXC5Q7LFL8 322 aaKnown RBP11.4□□□□□ -0.59
DDX39A-202ENST00000324340 BCDIN3DQ7Z5W3 292 aaKnown RBP11.4□□□□□ -0.59
DDX39A-202ENST00000324340 PXKQ7Z7A4 578 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 LUZP2Q86TE4 346 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 CPOQ8IVL8 374 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 LAX1Q8IWV1 398 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 SLC37A3Q8NCC5 494 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 OR5T2Q8NGG2 359 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 ZNF431Q8TF32 576 aaPredicted RBP11.4□□□□□ -0.59
DDX39A-202ENST00000324340 PTP4A1Q93096 173 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 CCDC120Q96HB5 630 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 DIRAS2Q96HU8 199 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 MIXL1Q9H2W2 232 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 TXNIPQ9H3M7 391 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 RAXQ9Y2V3 346 aa11.4□□□□□ -0.59
DDX39A-202ENST00000324340 TEX13CA0A0J9YWL9 993 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 IRGMA1A4Y4 181 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 AQP7P3A6NL99 342 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 INMT-MINDY4F8WBC2 141 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 MKRN2OSH3BPM6 223 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 RNF13O43567 381 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 EIF1BO60739 113 aaKnown RBP11.39□□□□□ -0.59
DDX39A-202ENST00000324340 AKR7A3O95154 331 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 SLC2A5P22732 501 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 AHCYP23526 432 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 AGFG1P52594 562 aaKnown RBP11.39□□□□□ -0.59
DDX39A-202ENST00000324340 NUDT6P53370 316 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 ZNF91Q05481 1191 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 CRMP1Q14194 572 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 ZNF169Q14929 603 aaPredicted RBP11.39□□□□□ -0.59
DDX39A-202ENST00000324340 SLC10A1Q14973 349 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 TBR1Q16650 682 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 PYDC2Q56P42 97 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 RNFT1Q5M7Z0 435 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 PLBD1Q6P4A8 553 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 MZT2AQ6P582 158 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 OVCH2Q7RTZ1 564 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 GID4Q8IVV7 300 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 TMEM99Q8N816 258 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 NPEPL1Q8NDH3 523 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 OR52E2Q8NGJ4 325 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 ZNF519Q8TB69 540 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 RBPMSQ93062 196 aaKnown RBP11.39□□□□□ -0.59
DDX39A-202ENST00000324340 RFKQ969G6 155 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 Q96M85 177 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 NMNAT2Q9BZQ4 307 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 RNF167Q9H6Y7 350 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 PPP1R3EQ9H7J1 279 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 AMBNQ9NP70 447 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 B3GAT1Q9P2W7 334 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 GRHPRQ9UBQ7 328 aa11.39□□□□□ -0.59
DDX39A-202ENST00000324340 ZNF346Q9UL40 294 aaKnown RBP11.39□□□□□ -0.59
DDX39A-202ENST00000324340 PRR23D1E9PI22 279 aaPredicted RBP11.38□□□□□ -0.59
DDX39A-202ENST00000324340 C11orf98E9PRG8 122 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 SLC19A2O60779 497 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 ACTL6AO96019 429 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 DHFRP00374 187 aa11.38□□□□□ -0.59
DDX39A-202ENST00000324340 ITGB2P05107 769 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms