RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 IQCMA0A1B0GVH7 501 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 OR6C65A6NJZ3 312 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 J3QLW9 94 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 ARL6IP5O75915 188 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 CLDN1O95832 211 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 ACTL6AO96019 429 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 MRPL3P09001 348 aaKnown RBP11.74□□□□□ -0.53
SLIRP-201ENST00000238688 PGA4P0DJD7 388 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 PGA3P0DJD8 388 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF823P16415 610 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF19P17023 458 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 POU3F2P20265 443 aaPredicted RBP11.74□□□□□ -0.53
SLIRP-201ENST00000238688 IL11P20809 199 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 MAPK3P27361 379 aaPredicted RBP11.74□□□□□ -0.53
SLIRP-201ENST00000238688 DCTDP32321 178 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 PYCR1P32322 319 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 S100A5P33763 92 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 SFTPDP35247 375 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 NAA10P41227 235 aaPredicted RBP11.74□□□□□ -0.53
SLIRP-201ENST00000238688 MTNR1BP49286 362 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 CCR9P51686 369 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 KCNMB1Q16558 191 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 YIF1BQ5BJH7 314 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 GLB1L2Q8IW92 636 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 SLC26A10Q8NG04 563 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 OR2V1Q8NHB1 315 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 MCFD2Q8NI22 146 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 PELI1Q96FA3 418 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 ADGRG7Q96K78 797 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 SLX1AQ9BQ83 275 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 WACQ9BTA9 647 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 NIPAL2Q9H841 368 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 DEPPQ9NTK1 212 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 NCKAP5O14513 1909 aa11.74□□□□□ -0.53
SLIRP-201ENST00000238688 A0A1W2PNR3 127 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 TMEM212A6NML5 194 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 CLDN25C9JDP6 229 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 NPIPA2E9PIF3 369 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 NPIPA3F8WFD2 350 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 DCTN6O00399 190 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 GPR171O14626 319 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 SELENOFO60613 162 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 SC5DO75845 299 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 F10P00742 488 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 PLGP00747 810 aaPredicted RBP11.73□□□□□ -0.53
SLIRP-201ENST00000238688 INHBBP09529 407 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 CTLA4P16410 223 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 ENPP1P22413 925 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 GUCA1AP43080 201 aaPredicted RBP11.73□□□□□ -0.53
SLIRP-201ENST00000238688 TDGF1P3P51864 188 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 SUCLG1P53597 346 aaKnown RBP11.73□□□□□ -0.53
SLIRP-201ENST00000238688 BIDP55957 195 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 CARD18P57730 90 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 OR12D2P58182 307 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 CLRN1P58418 232 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 RPS3AP61247 264 aaKnown RBP11.73□□□□□ -0.53
SLIRP-201ENST00000238688 LSM3P62310 102 aaKnown RBP11.73□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF846Q147U1 533 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 SLC17A1Q14916 467 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 TOMM20Q15388 145 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 C10orf128Q5T292 105 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 ABLIM2Q6H8Q1 611 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 SPINK14Q6IE38 97 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 SULF2Q8IWU5 870 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF679Q8IYX0 411 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 FAM109AQ8N4B1 249 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 MEIOBQ8N635 442 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 OR51L1Q8NGJ5 315 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 OR6Q1Q8NGQ2 317 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 OR6N2Q8NGY6 317 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 SLC25A46Q96AG3 418 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 KCTD12Q96CX2 325 aaKnown RBP11.73□□□□□ -0.53
SLIRP-201ENST00000238688 TEX15Q9BXT5 2789 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 MROQ9BYG7 248 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 TTTY12Q9BZ98 90 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 ISG20L2Q9H9L3 353 aaKnown RBP11.73□□□□□ -0.53
SLIRP-201ENST00000238688 RNF122Q9H9V4 155 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 GP6Q9HCN6 339 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 ANKRD10Q9NXR5 420 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 GALNT8Q9NY28 637 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 ST6GALNAC2Q9UJ37 374 aa11.73□□□□□ -0.53
SLIRP-201ENST00000238688 TRAV1-2A0A0B4J238 106 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 TRAV17A0A0B4J275 112 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 A1L4Q6 167 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 SHISA8B8ZZ34 492 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 GABRPO00591 440 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 WISP2O76076 250 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 ABHD16AO95870 558 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 LALBAP00709 142 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 HLA-DQA2P01906 255 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 EDN3P14138 238 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 NR4A1P22736 598 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 LAP3P28838 519 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 CD40LGP29965 261 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 ETV6P41212 452 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 RANBP1P43487 201 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 LSM6P62312 80 aaKnown RBP11.72□□□□□ -0.53
SLIRP-201ENST00000238688 RPS25P62851 125 aaKnown RBP11.72□□□□□ -0.53
SLIRP-201ENST00000238688 ADAM8P78325 824 aa11.72□□□□□ -0.53
SLIRP-201ENST00000238688 ARG2P78540 354 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms