RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	IFT57	Q9NWB7	429 aa		27.28	■■□□□ 1.96
NECAB3-222	ENST00000607805	TSKS	Q9UJT2	592 aa		27.28	■■□□□ 1.96
NECAB3-222	ENST00000607805	ZNF646	O15015	1829 aa	Predicted RBP	27.27	■■□□□ 1.96
NECAB3-222	ENST00000607805	CA12	O43570	354 aa		27.27	■■□□□ 1.96
NECAB3-222	ENST00000607805	EYA3	Q99504	573 aa		27.27	■■□□□ 1.96
NECAB3-222	ENST00000607805	ZNF408	Q9H9D4	720 aa		27.27	■■□□□ 1.96
NECAB3-222	ENST00000607805	SEC31B	Q9NQW1	1179 aa		27.27	■■□□□ 1.96
NECAB3-222	ENST00000607805	SPEF2	Q9C093	1822 aa		27.27	■■□□□ 1.96
NECAB3-222	ENST00000607805	DOK7	Q18PE1	504 aa		27.26	■■□□□ 1.95
NECAB3-222	ENST00000607805	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	27.26	■■□□□ 1.95
NECAB3-222	ENST00000607805	RIC3	Q7Z5B4	369 aa		27.26	■■□□□ 1.95
NECAB3-222	ENST00000607805	ZNF609	O15014	1411 aa		27.25	■■□□□ 1.95
NECAB3-222	ENST00000607805	VIL1	P09327	827 aa	Known RBP	27.25	■■□□□ 1.95
NECAB3-222	ENST00000607805	GOLGA2	Q08379	1002 aa		27.25	■■□□□ 1.95
NECAB3-222	ENST00000607805	CCDC191	Q8NCU4	936 aa		27.25	■■□□□ 1.95
NECAB3-222	ENST00000607805	ZIC5	Q96T25	663 aa		27.25	■■□□□ 1.95
NECAB3-222	ENST00000607805	APAF1	O14727	1248 aa		27.24	■■□□□ 1.95
NECAB3-222	ENST00000607805	PCCA	P05165	728 aa	Predicted RBP	27.24	■■□□□ 1.95
NECAB3-222	ENST00000607805	GNAI1	P63096	354 aa		27.24	■■□□□ 1.95
NECAB3-222	ENST00000607805	CACNA1F	O60840	1977 aa		27.23	■■□□□ 1.95
NECAB3-222	ENST00000607805	KRT26	Q7Z3Y9	468 aa		27.23	■■□□□ 1.95
NECAB3-222	ENST00000607805	HUNK	P57058	714 aa		27.22	■■□□□ 1.95
NECAB3-222	ENST00000607805	NOG	Q13253	232 aa		27.22	■■□□□ 1.95
NECAB3-222	ENST00000607805	C8orf58	Q8NAV2	365 aa		27.22	■■□□□ 1.95
NECAB3-222	ENST00000607805	MYD88	Q99836	296 aa		27.22	■■□□□ 1.95
NECAB3-222	ENST00000607805	TNRC18	O15417	2968 aa	Predicted RBP	27.22	■■□□□ 1.95
NECAB3-222	ENST00000607805	FAM155A	B1AL88	458 aa	Predicted RBP	27.21	■■□□□ 1.95
NECAB3-222	ENST00000607805	ELL2	O00472	640 aa	Predicted RBP	27.21	■■□□□ 1.95
NECAB3-222	ENST00000607805	HSP90B1	P14625	803 aa	Known RBP	27.21	■■□□□ 1.95
NECAB3-222	ENST00000607805	ZC3H12C	Q9C0D7	883 aa	Known RBP	27.21	■■□□□ 1.95
NECAB3-222	ENST00000607805	PDE8A	O60658	829 aa		27.2	■■□□□ 1.94
NECAB3-222	ENST00000607805	METTL22	Q9BUU2	404 aa	Predicted RBP	27.2	■■□□□ 1.94
NECAB3-222	ENST00000607805	PDE4DIP	Q5VU43	2346 aa		27.19	■■□□□ 1.94
NECAB3-222	ENST00000607805	ADM5	C9JUS6	153 aa		27.19	■■□□□ 1.94
NECAB3-222	ENST00000607805	CALD1	Q05682	793 aa	Known RBP	27.19	■■□□□ 1.94
NECAB3-222	ENST00000607805	CCDC152	Q4G0S7	254 aa		27.19	■■□□□ 1.94
NECAB3-222	ENST00000607805	GBA2	Q9HCG7	927 aa	Predicted RBP	27.19	■■□□□ 1.94
NECAB3-222	ENST00000607805	GGA1	Q9UJY5	639 aa		27.19	■■□□□ 1.94
NECAB3-222	ENST00000607805	UFL1	O94874	794 aa		27.18	■■□□□ 1.94
NECAB3-222	ENST00000607805	RGS19	P49795	217 aa		27.18	■■□□□ 1.94
NECAB3-222	ENST00000607805	KIF4B	Q2VIQ3	1234 aa		27.18	■■□□□ 1.94
NECAB3-222	ENST00000607805	RBM26	Q5T8P6	1007 aa	Known RBP	27.18	■■□□□ 1.94
NECAB3-222	ENST00000607805	DCPS	Q96C86	337 aa	Known RBP	27.18	■■□□□ 1.94
NECAB3-222	ENST00000607805	CWC25	Q9NXE8	425 aa	Predicted RBP	27.18	■■□□□ 1.94
NECAB3-222	ENST00000607805	ZNF280A	P59817	542 aa	Predicted RBP	27.17	■■□□□ 1.94
NECAB3-222	ENST00000607805	RGMB	Q6NW40	437 aa		27.17	■■□□□ 1.94
NECAB3-222	ENST00000607805	JARID2	Q92833	1246 aa	Predicted RBP	27.17	■■□□□ 1.94
NECAB3-222	ENST00000607805	ANKIB1	Q9P2G1	1089 aa		27.17	■■□□□ 1.94
NECAB3-222	ENST00000607805	ASTN2	O75129	1339 aa	Predicted RBP	27.16	■■□□□ 1.94
NECAB3-222	ENST00000607805	AGBL3	Q8NEM8	1001 aa		27.16	■■□□□ 1.94
NECAB3-222	ENST00000607805	GML	Q99445	158 aa		27.16	■■□□□ 1.94
NECAB3-222	ENST00000607805	RSBN1L	Q6PCB5	846 aa	Predicted RBP	27.15	■■□□□ 1.94
NECAB3-222	ENST00000607805	C2orf69	Q8N8R5	385 aa		27.15	■■□□□ 1.94
NECAB3-222	ENST00000607805	MCOLN1	Q9GZU1	580 aa		27.15	■■□□□ 1.94
NECAB3-222	ENST00000607805	XDH	P47989	1333 aa		27.15	■■□□□ 1.94
NECAB3-222	ENST00000607805	FAM161A	Q3B820	660 aa		27.14	■■□□□ 1.94
NECAB3-222	ENST00000607805	CCDC30	Q5VVM6	783 aa		27.14	■■□□□ 1.94
NECAB3-222	ENST00000607805	TSPYL6	Q8N831	410 aa		27.14	■■□□□ 1.94
NECAB3-222	ENST00000607805	GGA3	Q9NZ52	723 aa		27.14	■■□□□ 1.94
NECAB3-222	ENST00000607805	CCDC85C	A6NKD9	419 aa		27.13	■■□□□ 1.93
NECAB3-222	ENST00000607805	IGKV5-2	P06315	115 aa		27.13	■■□□□ 1.93
NECAB3-222	ENST00000607805	CCDC85A	Q96PX6	553 aa	Predicted RBP	27.13	■■□□□ 1.93
NECAB3-222	ENST00000607805	DDX58	O95786	925 aa	Known RBP	27.12	■■□□□ 1.93
NECAB3-222	ENST00000607805	ANKRD18A	Q8IVF6	992 aa		27.12	■■□□□ 1.93
NECAB3-222	ENST00000607805	CCDC102A	Q96A19	550 aa		27.12	■■□□□ 1.93
NECAB3-222	ENST00000607805	CHMP4A	Q9BY43	222 aa		27.12	■■□□□ 1.93
NECAB3-222	ENST00000607805	MAP3K2	Q9Y2U5	619 aa		27.12	■■□□□ 1.93
NECAB3-222	ENST00000607805	PAPPA2	Q9BXP8	1791 aa		27.12	■■□□□ 1.93
NECAB3-222	ENST00000607805	WTIP	A6NIX2	430 aa	Predicted RBP	27.11	■■□□□ 1.93
NECAB3-222	ENST00000607805	KSR2	Q6VAB6	950 aa		27.11	■■□□□ 1.93
NECAB3-222	ENST00000607805	SULF1	Q8IWU6	871 aa		27.11	■■□□□ 1.93
NECAB3-222	ENST00000607805	ATP2B4	P23634	1241 aa		27.1	■■□□□ 1.93
NECAB3-222	ENST00000607805	CTSW	P56202	376 aa		27.1	■■□□□ 1.93
NECAB3-222	ENST00000607805	KIF23	Q02241	960 aa	Predicted RBP	27.1	■■□□□ 1.93
NECAB3-222	ENST00000607805	SCARF1	Q14162	830 aa		27.1	■■□□□ 1.93
NECAB3-222	ENST00000607805	PODN	Q7Z5L7	613 aa		27.1	■■□□□ 1.93
NECAB3-222	ENST00000607805	TTLL11	Q8NHH1	800 aa		27.1	■■□□□ 1.93
NECAB3-222	ENST00000607805	CDCA5	Q96FF9	252 aa		27.1	■■□□□ 1.93
NECAB3-222	ENST00000607805	SAGE1	Q9NXZ1	904 aa		27.1	■■□□□ 1.93
NECAB3-222	ENST00000607805	PI4KAP2	A4QPH2	592 aa		27.09	■■□□□ 1.93
NECAB3-222	ENST00000607805		G3V3G9	751 aa		27.09	■■□□□ 1.93
NECAB3-222	ENST00000607805	SLC10A3	P09131	477 aa		27.09	■■□□□ 1.93
NECAB3-222	ENST00000607805	ZNF157	P51786	506 aa	Predicted RBP	27.09	■■□□□ 1.93
NECAB3-222	ENST00000607805	DCAF8	Q5TAQ9	597 aa		27.09	■■□□□ 1.93
NECAB3-222	ENST00000607805	PI4KAP1	Q8N8J0	262 aa		27.09	■■□□□ 1.93
NECAB3-222	ENST00000607805	ANGEL2	Q5VTE6	544 aa	Known RBP	27.08	■■□□□ 1.93
NECAB3-222	ENST00000607805	BSDC1	Q9NW68	430 aa	Predicted RBP	27.08	■■□□□ 1.93
NECAB3-222	ENST00000607805	MED23	Q9ULK4	1368 aa		27.08	■■□□□ 1.93
NECAB3-222	ENST00000607805	USP17L3	A6NCW0	530 aa		27.07	■■□□□ 1.92
NECAB3-222	ENST00000607805	USP17L4	A6NCW7	530 aa		27.07	■■□□□ 1.92
NECAB3-222	ENST00000607805	USP17L1	Q7RTZ2	530 aa		27.07	■■□□□ 1.92
NECAB3-222	ENST00000607805	CDC5L	Q99459	802 aa	Known RBP	27.07	■■□□□ 1.92
NECAB3-222	ENST00000607805	MYOZ2	Q9NPC6	264 aa		27.07	■■□□□ 1.92
NECAB3-222	ENST00000607805	MINPP1	Q9UNW1	487 aa		27.07	■■□□□ 1.92
NECAB3-222	ENST00000607805	PITPNM2	Q9BZ72	1349 aa		27.07	■■□□□ 1.92
NECAB3-222	ENST00000607805		A0A1B0GUL6	1792 aa		27.07	■■□□□ 1.92
NECAB3-222	ENST00000607805	USP17L8	P0C7I0	530 aa		27.06	■■□□□ 1.92
NECAB3-222	ENST00000607805	DGKZ	Q13574	1117 aa		27.06	■■□□□ 1.92
NECAB3-222	ENST00000607805	GREM2	Q9H772	168 aa		27.06	■■□□□ 1.92
NECAB3-222	ENST00000607805	MLLT1	Q03111	559 aa	Predicted RBP	27.05	■■□□□ 1.92

Retrieved 100 of 20,778 RNA–protein pairs in 181.4 ms