RNA–Protein interactions for RNA: ENST00000602174.5

NAPA-222, Transcript of NSF attachment protein alpha, human

TSL 2

Gene NAPA, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NAPA-222	ENST00000602174	HOXA10	P31260	410 aa	Predicted RBP	13.81	□□□□□ -0.2
NAPA-222	ENST00000602174	MAP1S	Q66K74	1059 aa	Predicted RBP	13.81	□□□□□ -0.2
NAPA-222	ENST00000602174	UBE3B	Q7Z3V4	1068 aa		13.81	□□□□□ -0.2
NAPA-222	ENST00000602174	PLA2G12B	Q9BX93	195 aa		13.81	□□□□□ -0.2
NAPA-222	ENST00000602174	NYX	Q9GZU5	481 aa		13.81	□□□□□ -0.2
NAPA-222	ENST00000602174	TMEM88B	A6NKF7	163 aa		13.8	□□□□□ -0.2
NAPA-222	ENST00000602174	MTX1	Q13505	466 aa		13.8	□□□□□ -0.2
NAPA-222	ENST00000602174	SUCLG2	Q96I99	432 aa		13.8	□□□□□ -0.2
NAPA-222	ENST00000602174	UTP14A	Q9BVJ6	771 aa	Known RBP	13.8	□□□□□ -0.2
NAPA-222	ENST00000602174	TRMT112	Q9UI30	125 aa	Known RBP	13.8	□□□□□ -0.2
NAPA-222	ENST00000602174	CLEC11A	Q9Y240	323 aa		13.8	□□□□□ -0.2
NAPA-222	ENST00000602174	LRRFIP2	Q9Y608	721 aa	Known RBP	13.8	□□□□□ -0.2
NAPA-222	ENST00000602174	SH3TC1	Q8TE82	1336 aa		13.8	□□□□□ -0.2
NAPA-222	ENST00000602174	FMR1	Q06787	632 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
NAPA-222	ENST00000602174	RABL6	Q3YEC7	729 aa	Predicted RBP	13.79	□□□□□ -0.2
NAPA-222	ENST00000602174	CNTROB	Q8N137	903 aa		13.79	□□□□□ -0.2
NAPA-222	ENST00000602174	GPC2	Q8N158	579 aa		13.79	□□□□□ -0.2
NAPA-222	ENST00000602174	KAZALD1	Q96I82	304 aa		13.79	□□□□□ -0.2
NAPA-222	ENST00000602174	TAF1	P21675	1872 aa		13.78	□□□□□ -0.2
NAPA-222	ENST00000602174	HSP90B1	P14625	803 aa	Known RBP	13.78	□□□□□ -0.2
NAPA-222	ENST00000602174	SCNN1D	P51172	638 aa		13.78	□□□□□ -0.2
NAPA-222	ENST00000602174	CEP85	Q6P2H3	762 aa		13.78	□□□□□ -0.2
NAPA-222	ENST00000602174	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.78	□□□□□ -0.2
NAPA-222	ENST00000602174	ANKRD44	Q8N8A2	993 aa		13.78	□□□□□ -0.2
NAPA-222	ENST00000602174	FAM89A	Q96GI7	184 aa		13.78	□□□□□ -0.2
NAPA-222	ENST00000602174	C1orf115	Q9H7X2	142 aa		13.78	□□□□□ -0.2
NAPA-222	ENST00000602174	PPP4R2	Q9NY27	417 aa		13.78	□□□□□ -0.2
NAPA-222	ENST00000602174	PCDHB15	Q9Y5E8	787 aa		13.78	□□□□□ -0.2
NAPA-222	ENST00000602174	RASSF10	A6NK89	507 aa		13.77	□□□□□ -0.21
NAPA-222	ENST00000602174	EPS15	P42566	896 aa		13.77	□□□□□ -0.21
NAPA-222	ENST00000602174	CC2D2B	Q6DHV5	1058 aa		13.77	□□□□□ -0.21
NAPA-222	ENST00000602174	PNMA8A	Q86V59	439 aa	Predicted RBP	13.77	□□□□□ -0.21
NAPA-222	ENST00000602174	RPGR	Q92834	1020 aa	Known RBP	13.77	□□□□□ -0.21
NAPA-222	ENST00000602174	TRPM7	Q96QT4	1865 aa		13.77	□□□□□ -0.21
NAPA-222	ENST00000602174	CRAMP1	Q96RY5	1269 aa		13.77	□□□□□ -0.21
NAPA-222	ENST00000602174	BICC1	Q9H694	974 aa	Known RBP	13.77	□□□□□ -0.21
NAPA-222	ENST00000602174	GTF3C3	Q9Y5Q9	886 aa		13.77	□□□□□ -0.21
NAPA-222	ENST00000602174	GJA3	Q9Y6H8	435 aa		13.77	□□□□□ -0.21
NAPA-222	ENST00000602174	RTL9	Q8NET4	1388 aa		13.76	□□□□□ -0.21
NAPA-222	ENST00000602174	IRS4	O14654	1257 aa	Predicted RBP	13.76	□□□□□ -0.21
NAPA-222	ENST00000602174	PPEF1	O14829	653 aa	Predicted RBP	13.76	□□□□□ -0.21
NAPA-222	ENST00000602174	PDE8A	O60658	829 aa		13.76	□□□□□ -0.21
NAPA-222	ENST00000602174	FOXO4	P98177	505 aa		13.76	□□□□□ -0.21
NAPA-222	ENST00000602174	HDAC1	Q13547	482 aa	Predicted RBP	13.76	□□□□□ -0.21
NAPA-222	ENST00000602174	EPHA10	Q5JZY3	1008 aa		13.76	□□□□□ -0.21
NAPA-222	ENST00000602174	SLC10A5	Q5PT55	438 aa		13.76	□□□□□ -0.21
NAPA-222	ENST00000602174	JDP2	Q8WYK2	163 aa		13.76	□□□□□ -0.21
NAPA-222	ENST00000602174	RBM17	Q96I25	401 aa	Known RBP	13.76	□□□□□ -0.21
NAPA-222	ENST00000602174	WBP1L	Q9NX94	342 aa		13.76	□□□□□ -0.21
NAPA-222	ENST00000602174	THSD7B	Q9C0I4	1608 aa		13.75	□□□□□ -0.21
NAPA-222	ENST00000602174	CTSW	P56202	376 aa		13.75	□□□□□ -0.21
NAPA-222	ENST00000602174	EIF6	P56537	245 aa	Known RBP	13.75	□□□□□ -0.21
NAPA-222	ENST00000602174	SIRT2	Q8IXJ6	389 aa		13.75	□□□□□ -0.21
NAPA-222	ENST00000602174	LARGE2	Q8N3Y3	721 aa		13.75	□□□□□ -0.21
NAPA-222	ENST00000602174	JARID2	Q92833	1246 aa	Predicted RBP	13.75	□□□□□ -0.21
NAPA-222	ENST00000602174	PRDM10	Q9NQV6	1147 aa		13.75	□□□□□ -0.21
NAPA-222	ENST00000602174	CSF1R	P07333	972 aa		13.74	□□□□□ -0.21
NAPA-222	ENST00000602174	ATP8B2	P98198	1209 aa		13.74	□□□□□ -0.21
NAPA-222	ENST00000602174	POLA2	Q14181	598 aa		13.74	□□□□□ -0.21
NAPA-222	ENST00000602174	DEFB115	Q30KQ5	88 aa		13.74	□□□□□ -0.21
NAPA-222	ENST00000602174	RTL5	Q5HYW3	569 aa	Predicted RBP	13.74	□□□□□ -0.21
NAPA-222	ENST00000602174	SSH3	Q8TE77	659 aa		13.74	□□□□□ -0.21
NAPA-222	ENST00000602174	COL4A1	P02462	1669 aa		13.73	□□□□□ -0.21
NAPA-222	ENST00000602174	TRAF5	O00463	557 aa		13.73	□□□□□ -0.21
NAPA-222	ENST00000602174	HMMR	O75330	724 aa		13.73	□□□□□ -0.21
NAPA-222	ENST00000602174	CTCF	P49711	727 aa	Predicted RBP	13.73	□□□□□ -0.21
NAPA-222	ENST00000602174	LBX1	P52954	281 aa		13.73	□□□□□ -0.21
NAPA-222	ENST00000602174	AOC3	Q16853	763 aa		13.73	□□□□□ -0.21
NAPA-222	ENST00000602174	ATP6V0A2	Q9Y487	856 aa		13.73	□□□□□ -0.21
NAPA-222	ENST00000602174	WDR33	Q9C0J8	1336 aa	Known RBP	13.72	□□□□□ -0.21
NAPA-222	ENST00000602174	DUOX1	Q9NRD9	1551 aa		13.72	□□□□□ -0.21
NAPA-222	ENST00000602174	PNMA6E	A0A0J9YXQ4	647 aa		13.72	□□□□□ -0.21
NAPA-222	ENST00000602174	PPIP5K2	O43314	1243 aa		13.72	□□□□□ -0.21
NAPA-222	ENST00000602174	HSPA8	P11142	646 aa	Known RBP	13.72	□□□□□ -0.21
NAPA-222	ENST00000602174	HCLS1	P14317	486 aa	Predicted RBP	13.72	□□□□□ -0.21
NAPA-222	ENST00000602174	SF3B3	Q15393	1217 aa	Known RBP	13.72	□□□□□ -0.21
NAPA-222	ENST00000602174	GRIPAP1	Q4V328	841 aa		13.72	□□□□□ -0.21
NAPA-222	ENST00000602174	CST9	Q5W186	159 aa		13.72	□□□□□ -0.21
NAPA-222	ENST00000602174	LMBR1L	Q6UX01	489 aa		13.72	□□□□□ -0.21
NAPA-222	ENST00000602174	TTLL11	Q8NHH1	800 aa		13.72	□□□□□ -0.21
NAPA-222	ENST00000602174	NLRP3	Q96P20	1036 aa		13.72	□□□□□ -0.21
NAPA-222	ENST00000602174	SRGAP3	O43295	1099 aa		13.71	□□□□□ -0.21
NAPA-222	ENST00000602174	LMOD1	P29536	600 aa	Predicted RBP	13.71	□□□□□ -0.21
NAPA-222	ENST00000602174	RFX5	P48382	616 aa	Predicted RBP	13.71	□□□□□ -0.21
NAPA-222	ENST00000602174	CXCL9	Q07325	125 aa		13.71	□□□□□ -0.21
NAPA-222	ENST00000602174	NIM1K	Q8IY84	436 aa		13.71	□□□□□ -0.21
NAPA-222	ENST00000602174	AIDA	Q96BJ3	306 aa		13.71	□□□□□ -0.21
NAPA-222	ENST00000602174	CCDC136	Q96JN2	1154 aa		13.71	□□□□□ -0.21
NAPA-222	ENST00000602174	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.71	□□□□□ -0.21
NAPA-222	ENST00000602174	RWDD1	Q9H446	243 aa	Predicted RBP	13.71	□□□□□ -0.21
NAPA-222	ENST00000602174	ABT1	Q9ULW3	272 aa	Known RBP	13.71	□□□□□ -0.21
NAPA-222	ENST00000602174	LRRC37A	A6NMS7	1700 aa		13.7	□□□□□ -0.22
NAPA-222	ENST00000602174	FAM161A	Q3B820	660 aa		13.7	□□□□□ -0.22
NAPA-222	ENST00000602174	CCDC152	Q4G0S7	254 aa		13.7	□□□□□ -0.22
NAPA-222	ENST00000602174	USP50	Q70EL3	339 aa	Predicted RBP	13.7	□□□□□ -0.22
NAPA-222	ENST00000602174	GPRC5D	Q9NZD1	345 aa		13.7	□□□□□ -0.22
NAPA-222	ENST00000602174	IGHD	P01880	384 aa		13.69	□□□□□ -0.22
NAPA-222	ENST00000602174	GMPS	P49915	693 aa	Predicted RBP	13.69	□□□□□ -0.22
NAPA-222	ENST00000602174	CYP4F22	Q6NT55	531 aa		13.69	□□□□□ -0.22
NAPA-222	ENST00000602174	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms