RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 CDC37L1Q7L3B6 337 aa13.85□□□□□ -0.19
TPM1-227ENST00000560970 EYA3Q99504 573 aa13.85□□□□□ -0.19
TPM1-227ENST00000560970 DBNDD1Q9H9R9 158 aa13.85□□□□□ -0.19
TPM1-227ENST00000560970 CNOT7Q9UIV1 285 aaKnown RBP13.85□□□□□ -0.19
TPM1-227ENST00000560970 NSFL1CQ9UNZ2 370 aaKnown RBP13.85□□□□□ -0.19
TPM1-227ENST00000560970 ARAP2Q8WZ64 1704 aa13.84□□□□□ -0.19
TPM1-227ENST00000560970 PSMD14O00487 310 aa13.84□□□□□ -0.19
TPM1-227ENST00000560970 IRS4O14654 1257 aaPredicted RBP13.84□□□□□ -0.19
TPM1-227ENST00000560970 ECE2O60344 883 aa13.84□□□□□ -0.19
TPM1-227ENST00000560970 RPS12P25398 132 aaKnown RBP13.84□□□□□ -0.19
TPM1-227ENST00000560970 GPSM2P81274 684 aa13.84□□□□□ -0.19
TPM1-227ENST00000560970 DPF2Q92785 391 aa13.84□□□□□ -0.19
TPM1-227ENST00000560970 C6orf229H3BNL8 230 aa13.83□□□□□ -0.2
TPM1-227ENST00000560970 HSP90B1P14625 803 aaKnown RBP13.83□□□□□ -0.2
TPM1-227ENST00000560970 GNAI1P63096 354 aa13.83□□□□□ -0.2
TPM1-227ENST00000560970 CALD1Q05682 793 aaKnown RBP13.83□□□□□ -0.2
TPM1-227ENST00000560970 TRIM28Q13263 835 aaKnown RBP13.83□□□□□ -0.2
TPM1-227ENST00000560970 NCBP3Q53F19 620 aaKnown RBP13.83□□□□□ -0.2
TPM1-227ENST00000560970 RTL5Q5HYW3 569 aaPredicted RBP13.83□□□□□ -0.2
TPM1-227ENST00000560970 TSR2Q969E8 191 aaKnown RBP13.83□□□□□ -0.2
TPM1-227ENST00000560970 TSKSQ9UJT2 592 aa13.83□□□□□ -0.2
TPM1-227ENST00000560970 ZBTB12Q9Y330 459 aaPredicted RBP13.83□□□□□ -0.2
TPM1-227ENST00000560970 RIMBP2O15034 1052 aa13.82□□□□□ -0.2
TPM1-227ENST00000560970 RIC3Q7Z5B4 369 aa13.82□□□□□ -0.2
TPM1-227ENST00000560970 ZBTB38Q8NAP3 1195 aaPredicted RBP13.82□□□□□ -0.2
TPM1-227ENST00000560970 POLLQ9UGP5 575 aa13.82□□□□□ -0.2
TPM1-227ENST00000560970 UFL1O94874 794 aa13.81□□□□□ -0.2
TPM1-227ENST00000560970 NOGQ13253 232 aa13.81□□□□□ -0.2
TPM1-227ENST00000560970 KIF4BQ2VIQ3 1234 aa13.81□□□□□ -0.2
TPM1-227ENST00000560970 TBC1D10BQ4KMP7 808 aaPredicted RBP13.81□□□□□ -0.2
TPM1-227ENST00000560970 SAMD7Q7Z3H4 446 aa13.81□□□□□ -0.2
TPM1-227ENST00000560970 KRT26Q7Z3Y9 468 aa13.81□□□□□ -0.2
TPM1-227ENST00000560970 TBC1D16Q8TBP0 767 aa13.81□□□□□ -0.2
TPM1-227ENST00000560970 SPINK5Q9NQ38 1064 aaPredicted RBP13.81□□□□□ -0.2
TPM1-227ENST00000560970 PODXL2Q9NZ53 605 aa13.81□□□□□ -0.2
TPM1-227ENST00000560970 IL16Q14005 1332 aa13.81□□□□□ -0.2
TPM1-227ENST00000560970 ZNF521Q96K83 1311 aa13.81□□□□□ -0.2
TPM1-227ENST00000560970 EGFRP00533 1210 aa13.8□□□□□ -0.2
TPM1-227ENST00000560970 HUNKP57058 714 aa13.8□□□□□ -0.2
TPM1-227ENST00000560970 RPS8P62241 208 aaKnown RBP13.8□□□□□ -0.2
TPM1-227ENST00000560970 CCDC152Q4G0S7 254 aa13.8□□□□□ -0.2
TPM1-227ENST00000560970 C8orf58Q8NAV2 365 aa13.8□□□□□ -0.2
TPM1-227ENST00000560970 MYD88Q99836 296 aa13.8□□□□□ -0.2
TPM1-227ENST00000560970 GGA3Q9NZ52 723 aa13.8□□□□□ -0.2
TPM1-227ENST00000560970 FANCIQ9NVI1 1328 aa13.8□□□□□ -0.2
TPM1-227ENST00000560970 TNRC18O15417 2968 aaPredicted RBP13.8□□□□□ -0.2
TPM1-227ENST00000560970 ADM5C9JUS6 153 aa13.79□□□□□ -0.2
TPM1-227ENST00000560970 PCCAP05165 728 aaPredicted RBP13.79□□□□□ -0.2
TPM1-227ENST00000560970 DOK7Q18PE1 504 aa13.79□□□□□ -0.2
TPM1-227ENST00000560970 FAM161AQ3B820 660 aa13.79□□□□□ -0.2
TPM1-227ENST00000560970 USP48Q86UV5 1035 aa13.79□□□□□ -0.2
TPM1-227ENST00000560970 TSPYL6Q8N831 410 aa13.79□□□□□ -0.2
TPM1-227ENST00000560970 CCDC191Q8NCU4 936 aa13.79□□□□□ -0.2
TPM1-227ENST00000560970 DCPSQ96C86 337 aaKnown RBP13.79□□□□□ -0.2
TPM1-227ENST00000560970 PHAXQ9H814 394 aaKnown RBP13.79□□□□□ -0.2
TPM1-227ENST00000560970 CWC25Q9NXE8 425 aaPredicted RBP13.79□□□□□ -0.2
TPM1-227ENST00000560970 GGA1Q9UJY5 639 aa13.79□□□□□ -0.2
TPM1-227ENST00000560970 ELL2O00472 640 aaPredicted RBP13.78□□□□□ -0.2
TPM1-227ENST00000560970 PDE8AO60658 829 aa13.78□□□□□ -0.2
TPM1-227ENST00000560970 DDX58O95786 925 aaKnown RBP13.78□□□□□ -0.2
TPM1-227ENST00000560970 WDR63Q8IWG1 891 aa13.78□□□□□ -0.2
TPM1-227ENST00000560970 ZC3H12CQ9C0D7 883 aaKnown RBP13.78□□□□□ -0.2
TPM1-227ENST00000560970 GBA2Q9HCG7 927 aaPredicted RBP13.78□□□□□ -0.2
TPM1-227ENST00000560970 SEC31BQ9NQW1 1179 aa13.78□□□□□ -0.2
TPM1-227ENST00000560970 ANKIB1Q9P2G1 1089 aa13.78□□□□□ -0.2
TPM1-227ENST00000560970 XDHP47989 1333 aa13.78□□□□□ -0.2
TPM1-227ENST00000560970 MED23Q9ULK4 1368 aa13.78□□□□□ -0.2
TPM1-227ENST00000560970 G3V3G9 751 aa13.77□□□□□ -0.21
TPM1-227ENST00000560970 DCAF8Q5TAQ9 597 aa13.77□□□□□ -0.21
TPM1-227ENST00000560970 RGMBQ6NW40 437 aa13.77□□□□□ -0.21
TPM1-227ENST00000560970 SULF1Q8IWU6 871 aa13.77□□□□□ -0.21
TPM1-227ENST00000560970 OTOFQ9HC10 1997 aa13.77□□□□□ -0.21
TPM1-227ENST00000560970 CCDC85CA6NKD9 419 aa13.76□□□□□ -0.21
TPM1-227ENST00000560970 FAM155AB1AL88 458 aaPredicted RBP13.76□□□□□ -0.21
TPM1-227ENST00000560970 VIL1P09327 827 aaKnown RBP13.76□□□□□ -0.21
TPM1-227ENST00000560970 CTSWP56202 376 aa13.76□□□□□ -0.21
TPM1-227ENST00000560970 CCDC30Q5VVM6 783 aa13.76□□□□□ -0.21
TPM1-227ENST00000560970 ANKRD18AQ8IVF6 992 aa13.76□□□□□ -0.21
TPM1-227ENST00000560970 C2orf69Q8N8R5 385 aa13.76□□□□□ -0.21
TPM1-227ENST00000560970 METTL22Q9BUU2 404 aaPredicted RBP13.76□□□□□ -0.21
TPM1-227ENST00000560970 CHMP4AQ9BY43 222 aa13.76□□□□□ -0.21
TPM1-227ENST00000560970 KCNQ5Q9NR82 932 aa13.76□□□□□ -0.21
TPM1-227ENST00000560970 SAGE1Q9NXZ1 904 aa13.76□□□□□ -0.21
TPM1-227ENST00000560970 PITPNM2Q9BZ72 1349 aa13.75□□□□□ -0.21
TPM1-227ENST00000560970 ZNF280AP59817 542 aaPredicted RBP13.75□□□□□ -0.21
TPM1-227ENST00000560970 RBM26Q5T8P6 1007 aaKnown RBP13.75□□□□□ -0.21
TPM1-227ENST00000560970 RSBN1LQ6PCB5 846 aaPredicted RBP13.75□□□□□ -0.21
TPM1-227ENST00000560970 DLK2Q6UY11 383 aa13.75□□□□□ -0.21
TPM1-227ENST00000560970 AGBL3Q8NEM8 1001 aa13.75□□□□□ -0.21
TPM1-227ENST00000560970 CDCA5Q96FF9 252 aa13.75□□□□□ -0.21
TPM1-227ENST00000560970 CDC5LQ99459 802 aaKnown RBP13.75□□□□□ -0.21
TPM1-227ENST00000560970 MCOLN1Q9GZU1 580 aa13.75□□□□□ -0.21
TPM1-227ENST00000560970 ASTN2O75129 1339 aaPredicted RBP13.74□□□□□ -0.21
TPM1-227ENST00000560970 SLC10A3P09131 477 aa13.74□□□□□ -0.21
TPM1-227ENST00000560970 CCDC102AQ96A19 550 aa13.74□□□□□ -0.21
TPM1-227ENST00000560970 CCDC85AQ96PX6 553 aaPredicted RBP13.74□□□□□ -0.21
TPM1-227ENST00000560970 ZIC5Q96T25 663 aa13.74□□□□□ -0.21
TPM1-227ENST00000560970 MAP3K2Q9Y2U5 619 aa13.74□□□□□ -0.21
TPM1-227ENST00000560970 MYH13Q9UKX3 1938 aa13.74□□□□□ -0.21
TPM1-227ENST00000560970 ATP2B4P23634 1241 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms