RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 DBNLQ9UJU6 430 aaKnown RBP21.2■□□□□ 0.98
RAB40C-203ENST00000535977 MTMR6Q9Y217 621 aa21.2■□□□□ 0.98
RAB40C-203ENST00000535977 WDR17Q8IZU2 1322 aa21.19■□□□□ 0.98
RAB40C-203ENST00000535977 GADD45BO75293 160 aaPredicted RBP21.19■□□□□ 0.98
RAB40C-203ENST00000535977 RPS6KB1P23443 525 aa21.19■□□□□ 0.98
RAB40C-203ENST00000535977 NCBP1Q09161 790 aaKnown RBP21.19■□□□□ 0.98
RAB40C-203ENST00000535977 KIAA1524Q8TCG1 905 aa21.19■□□□□ 0.98
RAB40C-203ENST00000535977 HAUS7Q99871 368 aa21.19■□□□□ 0.98
RAB40C-203ENST00000535977 CTNNA3Q9UI47 895 aa21.19■□□□□ 0.98
RAB40C-203ENST00000535977 TAF5LO75529 589 aa21.19■□□□□ 0.98
RAB40C-203ENST00000535977 LARP6Q9BRS8 491 aaKnown RBP21.19■□□□□ 0.98
RAB40C-203ENST00000535977 PYCARDQ9ULZ3 195 aa21.19■□□□□ 0.98
RAB40C-203ENST00000535977 CNPY2Q9Y2B0 182 aa21.19■□□□□ 0.98
RAB40C-203ENST00000535977 U3KPZ7 1027 aaPredicted RBP21.19■□□□□ 0.98
RAB40C-203ENST00000535977 NKX1-1Q15270 411 aaPredicted RBP21.18■□□□□ 0.98
RAB40C-203ENST00000535977 GDPD2Q9HCC8 539 aa21.18■□□□□ 0.98
RAB40C-203ENST00000535977 TPCN1Q9ULQ1 816 aa21.18■□□□□ 0.98
RAB40C-203ENST00000535977 TCHHQ07283 1943 aa21.17■□□□□ 0.98
RAB40C-203ENST00000535977 FOXD4L6Q3SYB3 417 aaPredicted RBP21.17■□□□□ 0.98
RAB40C-203ENST00000535977 FOXD4L3Q6VB84 417 aaPredicted RBP21.17■□□□□ 0.98
RAB40C-203ENST00000535977 CWC25Q9NXE8 425 aaPredicted RBP21.17■□□□□ 0.98
RAB40C-203ENST00000535977 LTBP4Q8N2S1 1624 aa21.17■□□□□ 0.98
RAB40C-203ENST00000535977 ATP5J2-PTCD1G3V325 749 aa21.17■□□□□ 0.98
RAB40C-203ENST00000535977 PTCD1O75127 700 aaKnown RBP21.17■□□□□ 0.98
RAB40C-203ENST00000535977 ATG3Q9NT62 314 aa21.16■□□□□ 0.98
RAB40C-203ENST00000535977 LMBR1LQ6UX01 489 aa21.16■□□□□ 0.98
RAB40C-203ENST00000535977 CCDC191Q8NCU4 936 aa21.16■□□□□ 0.98
RAB40C-203ENST00000535977 KCNF1Q9H3M0 494 aa21.16■□□□□ 0.98
RAB40C-203ENST00000535977 GLI3P10071 1580 aa21.15■□□□□ 0.98
RAB40C-203ENST00000535977 MCMDC2Q4G0Z9 681 aa21.15■□□□□ 0.98
RAB40C-203ENST00000535977 LARP1BQ659C4 914 aaKnown RBP21.15■□□□□ 0.98
RAB40C-203ENST00000535977 CCDC66A2RUB6 948 aa21.15■□□□□ 0.98
RAB40C-203ENST00000535977 FOXO4P98177 505 aa21.15■□□□□ 0.98
RAB40C-203ENST00000535977 PAXIP1Q6ZW49 1069 aaPredicted RBP21.15■□□□□ 0.98
RAB40C-203ENST00000535977 PRDM11Q9NQV5 511 aa21.15■□□□□ 0.98
RAB40C-203ENST00000535977 DDX41Q9UJV9 622 aaKnown RBP21.15■□□□□ 0.98
RAB40C-203ENST00000535977 TOM1L2Q6ZVM7 507 aa21.14■□□□□ 0.98
RAB40C-203ENST00000535977 ZNF589Q86UQ0 364 aaPredicted RBP21.14■□□□□ 0.98
RAB40C-203ENST00000535977 NBPF26B4DH59 902 aa21.14■□□□□ 0.97
RAB40C-203ENST00000535977 IL15P40933 162 aaPredicted RBP21.14■□□□□ 0.97
RAB40C-203ENST00000535977 PIP4K2AP48426 406 aaPredicted RBP21.14■□□□□ 0.97
RAB40C-203ENST00000535977 NBPF14Q5TI25 921 aa21.14■□□□□ 0.97
RAB40C-203ENST00000535977 NBPF10Q6P3W6 841 aaKnown RBP21.14■□□□□ 0.97
RAB40C-203ENST00000535977 NBPF15Q8N660 670 aa21.14■□□□□ 0.97
RAB40C-203ENST00000535977 HCLS1P14317 486 aaPredicted RBP21.13■□□□□ 0.97
RAB40C-203ENST00000535977 ST3GAL1Q11201 340 aa21.13■□□□□ 0.97
RAB40C-203ENST00000535977 TERF2Q15554 542 aa21.13■□□□□ 0.97
RAB40C-203ENST00000535977 BRINP3Q76B58 766 aa21.13■□□□□ 0.97
RAB40C-203ENST00000535977 KBTBD3Q8NAB2 608 aa21.13■□□□□ 0.97
RAB40C-203ENST00000535977 TIGD1Q96MW7 591 aa21.13■□□□□ 0.97
RAB40C-203ENST00000535977 DBNDD2Q9BQY9 259 aa21.13■□□□□ 0.97
RAB40C-203ENST00000535977 UBR2Q8IWV8 1755 aa21.13■□□□□ 0.97
RAB40C-203ENST00000535977 SLC20A2Q08357 652 aa21.13■□□□□ 0.97
RAB40C-203ENST00000535977 DNAJC2Q99543 621 aaKnown RBP21.13■□□□□ 0.97
RAB40C-203ENST00000535977 CARD10Q9BWT7 1032 aa21.13■□□□□ 0.97
RAB40C-203ENST00000535977 SH3TC1Q8TE82 1336 aa21.13■□□□□ 0.97
RAB40C-203ENST00000535977 KDM4AO75164 1064 aa21.12■□□□□ 0.97
RAB40C-203ENST00000535977 HMGB1P09429 215 aaKnown RBP21.12■□□□□ 0.97
RAB40C-203ENST00000535977 NEK1Q96PY6 1258 aa21.12■□□□□ 0.97
RAB40C-203ENST00000535977 PALLDQ8WX93 1383 aa21.12■□□□□ 0.97
RAB40C-203ENST00000535977 VPS37CA5D8V6 355 aaPredicted RBP21.12■□□□□ 0.97
RAB40C-203ENST00000535977 CIAO1O76071 339 aa21.12■□□□□ 0.97
RAB40C-203ENST00000535977 IL2RBP14784 551 aa21.12■□□□□ 0.97
RAB40C-203ENST00000535977 KRT85P78386 507 aa21.12■□□□□ 0.97
RAB40C-203ENST00000535977 PLCB2Q00722 1185 aa21.12■□□□□ 0.97
RAB40C-203ENST00000535977 TOB2Q14106 344 aaPredicted RBP21.12■□□□□ 0.97
RAB40C-203ENST00000535977 NECAB1Q8N987 351 aa21.12■□□□□ 0.97
RAB40C-203ENST00000535977 HELLSQ9NRZ9 838 aa21.12■□□□□ 0.97
RAB40C-203ENST00000535977 FIBPO43427 364 aa21.11■□□□□ 0.97
RAB40C-203ENST00000535977 CERKQ8TCT0 537 aa21.11■□□□□ 0.97
RAB40C-203ENST00000535977 MORC2Q9Y6X9 1032 aaPredicted RBP21.11■□□□□ 0.97
RAB40C-203ENST00000535977 ELP1O95163 1332 aa21.11■□□□□ 0.97
RAB40C-203ENST00000535977 DNM1Q05193 864 aaKnown RBP21.11■□□□□ 0.97
RAB40C-203ENST00000535977 SOS2Q07890 1332 aaPredicted RBP21.1■□□□□ 0.97
RAB40C-203ENST00000535977 FBXO3Q9UK99 471 aa21.1■□□□□ 0.97
RAB40C-203ENST00000535977 ATG9AQ7Z3C6 839 aa21.1■□□□□ 0.97
RAB40C-203ENST00000535977 EDC3Q96F86 508 aaKnown RBP21.1■□□□□ 0.97
RAB40C-203ENST00000535977 PIP4K2BP78356 416 aa21.09■□□□□ 0.97
RAB40C-203ENST00000535977 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.09■□□□□ 0.97
RAB40C-203ENST00000535977 CHMP3Q9Y3E7 222 aa21.09■□□□□ 0.97
RAB40C-203ENST00000535977 XIRP1Q702N8 1843 aaKnown RBP21.09■□□□□ 0.97
RAB40C-203ENST00000535977 KCPQ6ZWJ8 1503 aa21.09■□□□□ 0.97
RAB40C-203ENST00000535977 NUP188Q5SRE5 1749 aa21.09■□□□□ 0.97
RAB40C-203ENST00000535977 NAA30Q147X3 362 aaPredicted RBP21.09■□□□□ 0.97
RAB40C-203ENST00000535977 SYCP1Q15431 976 aa21.09■□□□□ 0.97
RAB40C-203ENST00000535977 DDX54Q8TDD1 881 aaKnown RBP21.09■□□□□ 0.97
RAB40C-203ENST00000535977 ZNF609O15014 1411 aa21.09■□□□□ 0.97
RAB40C-203ENST00000535977 COL5A2P05997 1499 aaPredicted RBP21.08■□□□□ 0.97
RAB40C-203ENST00000535977 PAPPAQ13219 1627 aa21.08■□□□□ 0.97
RAB40C-203ENST00000535977 EYA2O00167 538 aa21.08■□□□□ 0.97
RAB40C-203ENST00000535977 LRRFIP1Q32MZ4 808 aaKnown RBP21.08■□□□□ 0.97
RAB40C-203ENST00000535977 TTLL7Q6ZT98 887 aa21.08■□□□□ 0.97
RAB40C-203ENST00000535977 CHMP4CQ96CF2 233 aa21.08■□□□□ 0.97
RAB40C-203ENST00000535977 DSCC1Q9BVC3 393 aa21.08■□□□□ 0.97
RAB40C-203ENST00000535977 TEX13AQ9BXU3 409 aaPredicted RBP21.08■□□□□ 0.97
RAB40C-203ENST00000535977 SCAND2PQ9GZW5 306 aaPredicted RBP21.08■□□□□ 0.97
RAB40C-203ENST00000535977 AP5Z1O43299 807 aa21.08■□□□□ 0.96
RAB40C-203ENST00000535977 CAPN2P17655 700 aa21.08■□□□□ 0.96
RAB40C-203ENST00000535977 TNS2Q63HR2 1409 aa21.07■□□□□ 0.96
RAB40C-203ENST00000535977 KIF18AQ8NI77 898 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms