RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ZC3H4Q9UPT8 1303 aaKnown RBP15.01□□□□□ -0.01
SSBP3-214ENST00000533209 RFX5P48382 616 aaPredicted RBP15.01□□□□□ -0.01
SSBP3-214ENST00000533209 PDE3AQ14432 1141 aa15.01□□□□□ -0.01
SSBP3-214ENST00000533209 TAF7LQ5H9L4 462 aa15.01□□□□□ -0.01
SSBP3-214ENST00000533209 TBC1D16Q8TBP0 767 aa15.01□□□□□ -0.01
SSBP3-214ENST00000533209 VPS33BQ9H267 617 aa15.01□□□□□ -0.01
SSBP3-214ENST00000533209 ANKIB1Q9P2G1 1089 aa15.01□□□□□ -0.01
SSBP3-214ENST00000533209 LTBP1Q14766 1721 aa15□□□□□ -0.01
SSBP3-214ENST00000533209 COL4A5P29400 1685 aa15□□□□□ -0.01
SSBP3-214ENST00000533209 C6orf229H3BNL8 230 aa15□□□□□ -0.01
SSBP3-214ENST00000533209 PPIP5K2O43314 1243 aa15□□□□□ -0.01
SSBP3-214ENST00000533209 GNAI2P04899 355 aa15□□□□□ -0.01
SSBP3-214ENST00000533209 CHRNDQ07001 517 aa15□□□□□ -0.01
SSBP3-214ENST00000533209 KIAA2012Q0VF49 1180 aa15□□□□□ -0.01
SSBP3-214ENST00000533209 MTX1Q13505 466 aa15□□□□□ -0.01
SSBP3-214ENST00000533209 MVPQ14764 893 aaKnown RBP15□□□□□ -0.01
SSBP3-214ENST00000533209 AOC3Q16853 763 aa15□□□□□ -0.01
SSBP3-214ENST00000533209 LDHAL6AQ6ZMR3 332 aa15□□□□□ -0.01
SSBP3-214ENST00000533209 PUS3Q9BZE2 481 aaKnown RBP15□□□□□ -0.01
SSBP3-214ENST00000533209 GGA1Q9UJY5 639 aa15□□□□□ -0.01
SSBP3-214ENST00000533209 COG6Q9Y2V7 657 aa15□□□□□ -0.01
SSBP3-214ENST00000533209 WTIPA6NIX2 430 aaPredicted RBP14.99□□□□□ -0.01
SSBP3-214ENST00000533209 UFL1O94874 794 aa14.99□□□□□ -0.01
SSBP3-214ENST00000533209 PTPN12Q05209 780 aaKnown RBP14.99□□□□□ -0.01
SSBP3-214ENST00000533209 LARGE2Q8N3Y3 721 aa14.99□□□□□ -0.01
SSBP3-214ENST00000533209 KLHDC4Q8TBB5 520 aa14.99□□□□□ -0.01
SSBP3-214ENST00000533209 GPR101Q96P66 508 aaPredicted RBP14.99□□□□□ -0.01
SSBP3-214ENST00000533209 ANKRD2Q9GZV1 360 aa14.99□□□□□ -0.01
SSBP3-214ENST00000533209 ATP2B4P23634 1241 aa14.98□□□□□ -0.01
SSBP3-214ENST00000533209 RRP1P56182 461 aaKnown RBP14.98□□□□□ -0.01
SSBP3-214ENST00000533209 WASHC4Q2M389 1173 aa14.98□□□□□ -0.01
SSBP3-214ENST00000533209 ZNF784Q8NCA9 323 aaPredicted RBP14.98□□□□□ -0.01
SSBP3-214ENST00000533209 HELBQ8NG08 1087 aaPredicted RBP14.98□□□□□ -0.01
SSBP3-214ENST00000533209 CNNM1Q9NRU3 951 aa14.98□□□□□ -0.01
SSBP3-214ENST00000533209 RIPOR2Q9Y4F9 1068 aa14.98□□□□□ -0.01
SSBP3-214ENST00000533209 FZD9O00144 591 aa14.97□□□□□ -0.01
SSBP3-214ENST00000533209 LRRC24Q50LG9 513 aa14.97□□□□□ -0.01
SSBP3-214ENST00000533209 JDP2Q8WYK2 163 aa14.97□□□□□ -0.01
SSBP3-214ENST00000533209 EYA3Q99504 573 aa14.97□□□□□ -0.01
SSBP3-214ENST00000533209 C1orf115Q9H7X2 142 aa14.97□□□□□ -0.01
SSBP3-214ENST00000533209 DDX19BQ9UMR2 479 aa14.97□□□□□ -0.01
SSBP3-214ENST00000533209 SPEF2Q9C093 1822 aa14.96□□□□□ -0.01
SSBP3-214ENST00000533209 RIMBP2O15034 1052 aa14.96□□□□□ -0.01
SSBP3-214ENST00000533209 TAF5LO75529 589 aa14.96□□□□□ -0.01
SSBP3-214ENST00000533209 CCDC88AQ3V6T2 1871 aa14.96□□□□□ -0.01
SSBP3-214ENST00000533209 TIAM2Q8IVF5 1701 aa14.96□□□□□ -0.01
SSBP3-214ENST00000533209 NIM1KQ8IY84 436 aa14.96□□□□□ -0.01
SSBP3-214ENST00000533209 PA2G4Q9UQ80 394 aaKnown RBP14.96□□□□□ -0.01
SSBP3-214ENST00000533209 LEMD3Q9Y2U8 911 aa14.96□□□□□ -0.01
SSBP3-214ENST00000533209 DICER1Q9UPY3 1922 aaKnown RBP14.96□□□□□ -0.02
SSBP3-214ENST00000533209 ZNF804BA4D1E1 1349 aa14.95□□□□□ -0.02
SSBP3-214ENST00000533209 ZNF541Q9H0D2 1346 aa14.95□□□□□ -0.02
SSBP3-214ENST00000533209 PNMA6EA0A0J9YXQ4 647 aa14.95□□□□□ -0.02
SSBP3-214ENST00000533209 GLTPD2A6NH11 291 aa14.95□□□□□ -0.02
SSBP3-214ENST00000533209 SNAP23O00161 211 aa14.95□□□□□ -0.02
SSBP3-214ENST00000533209 EYA2O00167 538 aa14.95□□□□□ -0.02
SSBP3-214ENST00000533209 SRGAP3O43295 1099 aa14.95□□□□□ -0.02
SSBP3-214ENST00000533209 ATG9AQ7Z3C6 839 aa14.95□□□□□ -0.02
SSBP3-214ENST00000533209 ZNF526Q8TF50 670 aaPredicted RBP14.95□□□□□ -0.02
SSBP3-214ENST00000533209 ZC3H12CQ9C0D7 883 aaKnown RBP14.95□□□□□ -0.02
SSBP3-214ENST00000533209 ZBTB40Q9NUA8 1239 aa14.95□□□□□ -0.02
SSBP3-214ENST00000533209 MROH5Q6ZUA9 1318 aa14.94□□□□□ -0.02
SSBP3-214ENST00000533209 ATP8B2P98198 1209 aa14.94□□□□□ -0.02
SSBP3-214ENST00000533209 POLA2Q14181 598 aa14.94□□□□□ -0.02
SSBP3-214ENST00000533209 DOK7Q18PE1 504 aa14.94□□□□□ -0.02
SSBP3-214ENST00000533209 TXNRD3Q86VQ6 643 aa14.94□□□□□ -0.02
SSBP3-214ENST00000533209 SIL1Q9H173 461 aa14.94□□□□□ -0.02
SSBP3-214ENST00000533209 COPRSQ9NQ92 184 aa14.94□□□□□ -0.02
SSBP3-214ENST00000533209 FBXO3Q9UK99 471 aa14.94□□□□□ -0.02
SSBP3-214ENST00000533209 ZNRF3Q9ULT6 936 aa14.94□□□□□ -0.02
SSBP3-214ENST00000533209 MED23Q9ULK4 1368 aa14.94□□□□□ -0.02
SSBP3-214ENST00000533209 IRS2Q9Y4H2 1338 aa14.93□□□□□ -0.02
SSBP3-214ENST00000533209 YDJCA8MPS7 323 aa14.93□□□□□ -0.02
SSBP3-214ENST00000533209 CIAO1O76071 339 aa14.93□□□□□ -0.02
SSBP3-214ENST00000533209 DDNO94850 711 aaPredicted RBP14.93□□□□□ -0.02
SSBP3-214ENST00000533209 KLRK1P26718 216 aa14.93□□□□□ -0.02
SSBP3-214ENST00000533209 KCNJ4P48050 445 aa14.93□□□□□ -0.02
SSBP3-214ENST00000533209 METTL24Q5JXM2 366 aa14.93□□□□□ -0.02
SSBP3-214ENST00000533209 DPY19L2Q6NUT2 758 aa14.93□□□□□ -0.02
SSBP3-214ENST00000533209 CEP85Q6P2H3 762 aa14.93□□□□□ -0.02
SSBP3-214ENST00000533209 VGLL2Q8N8G2 317 aa14.93□□□□□ -0.02
SSBP3-214ENST00000533209 SSH3Q8TE77 659 aa14.93□□□□□ -0.02
SSBP3-214ENST00000533209 DBNDD1Q9H9R9 158 aa14.93□□□□□ -0.02
SSBP3-214ENST00000533209 KDM2BQ8NHM5 1336 aa14.92□□□□□ -0.02
SSBP3-214ENST00000533209 ECE2O60344 883 aa14.92□□□□□ -0.02
SSBP3-214ENST00000533209 EIF6P56537 245 aaKnown RBP14.92□□□□□ -0.02
SSBP3-214ENST00000533209 CXCL9Q07325 125 aa14.92□□□□□ -0.02
SSBP3-214ENST00000533209 UBE4AQ14139 1066 aa14.92□□□□□ -0.02
SSBP3-214ENST00000533209 C15orf52Q6ZUT6 534 aaKnown RBP14.92□□□□□ -0.02
SSBP3-214ENST00000533209 CHMP4BQ9H444 224 aaKnown RBP14.92□□□□□ -0.02
SSBP3-214ENST00000533209 GPBP1L1Q9HC44 474 aaPredicted RBP14.92□□□□□ -0.02
SSBP3-214ENST00000533209 PDE8BO95263 885 aa14.91□□□□□ -0.02
SSBP3-214ENST00000533209 NMRK2Q9NPI5 230 aa14.91□□□□□ -0.02
SSBP3-214ENST00000533209 KCNQ5Q9NR82 932 aa14.91□□□□□ -0.02
SSBP3-214ENST00000533209 A0A1B0GUL6 1792 aa14.9□□□□□ -0.02
SSBP3-214ENST00000533209 RAD17O75943 681 aa14.9□□□□□ -0.02
SSBP3-214ENST00000533209 IL15P40933 162 aaPredicted RBP14.9□□□□□ -0.02
SSBP3-214ENST00000533209 GPC2Q8N158 579 aa14.9□□□□□ -0.02
SSBP3-214ENST00000533209 L3MBTL3Q96JM7 780 aaPredicted RBP14.9□□□□□ -0.02
SSBP3-214ENST00000533209 POTECB2RU33 542 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms