RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 CACTINQ8WUQ7 758 aaKnown RBP17.31■□□□□ 0.36
USP38-202ENST00000510377 GTF3C6Q969F1 213 aa17.31■□□□□ 0.36
USP38-202ENST00000510377 MLH3Q9UHC1 1453 aa17.31■□□□□ 0.36
USP38-202ENST00000510377 TIMM10P62072 90 aa17.31■□□□□ 0.36
USP38-202ENST00000510377 AKAP4Q5JQC9 854 aa17.31■□□□□ 0.36
USP38-202ENST00000510377 OGFRQ9NZT2 677 aa17.31■□□□□ 0.36
USP38-202ENST00000510377 CAVIN2O95810 425 aa17.3■□□□□ 0.36
USP38-202ENST00000510377 ARID5BQ14865 1188 aa17.3■□□□□ 0.36
USP38-202ENST00000510377 CPLX3Q8WVH0 158 aa17.3■□□□□ 0.36
USP38-202ENST00000510377 ARHGEF10O15013 1369 aa17.3■□□□□ 0.36
USP38-202ENST00000510377 ZNF589Q86UQ0 364 aaPredicted RBP17.3■□□□□ 0.36
USP38-202ENST00000510377 ZNF215Q9UL58 517 aaPredicted RBP17.3■□□□□ 0.36
USP38-202ENST00000510377 KIF2AO00139 706 aaPredicted RBP17.3■□□□□ 0.36
USP38-202ENST00000510377 KIAA1210Q9ULL0 1709 aa17.29■□□□□ 0.36
USP38-202ENST00000510377 UBAP1LF5GYI3 381 aa17.29■□□□□ 0.36
USP38-202ENST00000510377 LTKP29376 864 aa17.29■□□□□ 0.36
USP38-202ENST00000510377 NUP133Q8WUM0 1156 aa17.29■□□□□ 0.36
USP38-202ENST00000510377 CTNNA3Q9UI47 895 aa17.29■□□□□ 0.36
USP38-202ENST00000510377 NRXN1Q9ULB1 1477 aa17.29■□□□□ 0.36
USP38-202ENST00000510377 MICU3Q86XE3 530 aa17.29■□□□□ 0.36
USP38-202ENST00000510377 ZFP91Q96JP5 570 aaPredicted RBP17.29■□□□□ 0.36
USP38-202ENST00000510377 TTC14Q96N46 770 aa17.29■□□□□ 0.36
USP38-202ENST00000510377 RXRAP19793 462 aa17.29■□□□□ 0.36
USP38-202ENST00000510377 NFATC2IPQ8NCF5 419 aa17.29■□□□□ 0.36
USP38-202ENST00000510377 SHPRHQ149N8 1683 aa17.29■□□□□ 0.36
USP38-202ENST00000510377 CCP110O43303 1012 aa17.28■□□□□ 0.36
USP38-202ENST00000510377 CNNM1Q9NRU3 951 aa17.28■□□□□ 0.36
USP38-202ENST00000510377 DHX32Q7L7V1 743 aaKnown RBP17.28■□□□□ 0.36
USP38-202ENST00000510377 CADPS2Q86UW7 1296 aa17.28■□□□□ 0.36
USP38-202ENST00000510377 ZNF397Q8NF99 534 aaPredicted RBP17.28■□□□□ 0.36
USP38-202ENST00000510377 COL3A1P02461 1466 aaPredicted RBP17.28■□□□□ 0.36
USP38-202ENST00000510377 MROH2AA6NES4 1674 aa17.28■□□□□ 0.36
USP38-202ENST00000510377 ROBO2Q9HCK4 1378 aa17.28■□□□□ 0.36
USP38-202ENST00000510377 RNMTO43148 476 aaKnown RBP17.28■□□□□ 0.36
USP38-202ENST00000510377 FEZ1Q99689 392 aa17.28■□□□□ 0.36
USP38-202ENST00000510377 CBFA2T2O43439 604 aa17.28■□□□□ 0.36
USP38-202ENST00000510377 ARHGAP29Q52LW3 1261 aa17.28■□□□□ 0.36
USP38-202ENST00000510377 USP28Q96RU2 1077 aa17.28■□□□□ 0.36
USP38-202ENST00000510377 RPAP1Q9BWH6 1393 aaPredicted RBP17.27■□□□□ 0.36
USP38-202ENST00000510377 PTPRMP28827 1452 aa17.27■□□□□ 0.36
USP38-202ENST00000510377 ERICH2A1L162 156 aa17.27■□□□□ 0.36
USP38-202ENST00000510377 UBASH3AP57075 661 aa17.27■□□□□ 0.36
USP38-202ENST00000510377 NOL10Q9BSC4 688 aaKnown RBP17.27■□□□□ 0.36
USP38-202ENST00000510377 TMEM87AQ8NBN3 555 aa17.27■□□□□ 0.36
USP38-202ENST00000510377 MAP4K1Q92918 833 aa17.27■□□□□ 0.36
USP38-202ENST00000510377 MTMR7Q9Y216 660 aa17.27■□□□□ 0.36
USP38-202ENST00000510377 GNG11P61952 73 aa17.27■□□□□ 0.35
USP38-202ENST00000510377 PCMTD1Q96MG8 357 aaPredicted RBP17.27■□□□□ 0.35
USP38-202ENST00000510377 EPB41L2O43491 1005 aaKnown RBP17.26■□□□□ 0.35
USP38-202ENST00000510377 C11orf57Q6ZUT1 292 aaPredicted RBP17.26■□□□□ 0.35
USP38-202ENST00000510377 CNNM3Q8NE01 707 aa17.26■□□□□ 0.35
USP38-202ENST00000510377 KCNF1Q9H3M0 494 aa17.26■□□□□ 0.35
USP38-202ENST00000510377 CAMSAP1Q5T5Y3 1602 aa17.26■□□□□ 0.35
USP38-202ENST00000510377 FAM160A1Q05DH4 1040 aa17.26■□□□□ 0.35
USP38-202ENST00000510377 TSR1Q2NL82 804 aaKnown RBP17.26■□□□□ 0.35
USP38-202ENST00000510377 IGSF1Q8N6C5 1336 aa17.26■□□□□ 0.35
USP38-202ENST00000510377 ZNF213O14771 459 aa17.26■□□□□ 0.35
USP38-202ENST00000510377 SPTLC2O15270 562 aa17.26■□□□□ 0.35
USP38-202ENST00000510377 DMTNQ08495 405 aa17.26■□□□□ 0.35
USP38-202ENST00000510377 PAG1Q9NWQ8 432 aa17.25■□□□□ 0.35
USP38-202ENST00000510377 TBC1D2BQ9UPU7 963 aa17.25■□□□□ 0.35
USP38-202ENST00000510377 SYKP43405 635 aa17.25■□□□□ 0.35
USP38-202ENST00000510377 BMS1Q14692 1282 aaKnown RBP17.25■□□□□ 0.35
USP38-202ENST00000510377 HSP90B2PQ58FF3 399 aa17.25■□□□□ 0.35
USP38-202ENST00000510377 TNNI3KQ59H18 835 aa17.25■□□□□ 0.35
USP38-202ENST00000510377 KRT28Q7Z3Y7 464 aa17.25■□□□□ 0.35
USP38-202ENST00000510377 DDX21Q9NR30 783 aaKnown RBP eCLIP17.25■□□□□ 0.35
USP38-202ENST00000510377 FPGT-TNNI3KV9GXZ4 949 aa17.25■□□□□ 0.35
USP38-202ENST00000510377 POLA2Q14181 598 aa17.25■□□□□ 0.35
USP38-202ENST00000510377 NECTIN1Q15223 517 aa17.25■□□□□ 0.35
USP38-202ENST00000510377 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.25■□□□□ 0.35
USP38-202ENST00000510377 PPFIBP1Q86W92 1011 aa17.25■□□□□ 0.35
USP38-202ENST00000510377 GTF2E1P29083 439 aaPredicted RBP17.24■□□□□ 0.35
USP38-202ENST00000510377 CHRNA2Q15822 529 aa17.24■□□□□ 0.35
USP38-202ENST00000510377 PTPN21Q16825 1174 aa17.24■□□□□ 0.35
USP38-202ENST00000510377 IP6K1Q92551 441 aa17.24■□□□□ 0.35
USP38-202ENST00000510377 ARHGEF40Q8TER5 1519 aa17.24■□□□□ 0.35
USP38-202ENST00000510377 CCDC150Q8NCX0 1101 aa17.24■□□□□ 0.35
USP38-202ENST00000510377 ADGRB2O60241 1585 aa17.23■□□□□ 0.35
USP38-202ENST00000510377 INO80Q9ULG1 1556 aaPredicted RBP17.23■□□□□ 0.35
USP38-202ENST00000510377 LRRC8AQ8IWT6 810 aa17.23■□□□□ 0.35
USP38-202ENST00000510377 ARAP3Q8WWN8 1544 aa17.23■□□□□ 0.35
USP38-202ENST00000510377 CASQ1P31415 396 aa17.23■□□□□ 0.35
USP38-202ENST00000510377 UTP14AQ9BVJ6 771 aaKnown RBP17.23■□□□□ 0.35
USP38-202ENST00000510377 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.23■□□□□ 0.35
USP38-202ENST00000510377 PRC1O43663 620 aa17.23■□□□□ 0.35
USP38-202ENST00000510377 ERCC6LQ2NKX8 1250 aa17.23■□□□□ 0.35
USP38-202ENST00000510377 SLFNL1Q499Z3 407 aa17.23■□□□□ 0.35
USP38-202ENST00000510377 METTL24Q5JXM2 366 aa17.23■□□□□ 0.35
USP38-202ENST00000510377 SASH1O94885 1247 aa17.22■□□□□ 0.35
USP38-202ENST00000510377 ZNF594Q96JF6 807 aaPredicted RBP17.22■□□□□ 0.35
USP38-202ENST00000510377 ZSCAN12O43309 604 aa17.22■□□□□ 0.35
USP38-202ENST00000510377 GIGYF1O75420 1035 aaPredicted RBP17.22■□□□□ 0.35
USP38-202ENST00000510377 TAF5LO75529 589 aa17.22■□□□□ 0.35
USP38-202ENST00000510377 XPO4Q9C0E2 1151 aaKnown RBP17.22■□□□□ 0.35
USP38-202ENST00000510377 ALKQ9UM73 1620 aa17.22■□□□□ 0.35
USP38-202ENST00000510377 HECW2Q9P2P5 1572 aa17.22■□□□□ 0.35
USP38-202ENST00000510377 ZNF710Q8N1W2 664 aa17.22■□□□□ 0.35
USP38-202ENST00000510377 ANKRD20A12PQ8NF67 263 aa17.22■□□□□ 0.35
USP38-202ENST00000510377 KCNG4Q8TDN1 519 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms