RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 EIF2S2P20042 333 aaKnown RBP6.9□□□□□ -1.3
LINC02397-201ENST00000504409 CCT6AP40227 531 aaKnown RBP6.9□□□□□ -1.3
LINC02397-201ENST00000504409 ZNF165P49910 485 aa6.9□□□□□ -1.3
LINC02397-201ENST00000504409 DRC3Q9H069 523 aa6.9□□□□□ -1.3
LINC02397-201ENST00000504409 CACNA1FO60840 1977 aa6.9□□□□□ -1.3
LINC02397-201ENST00000504409 ICA1Q05084 483 aa6.9□□□□□ -1.3
LINC02397-201ENST00000504409 IFT20Q8IY31 132 aa6.9□□□□□ -1.3
LINC02397-201ENST00000504409 NAP1L1P55209 391 aaKnown RBP6.9□□□□□ -1.3
LINC02397-201ENST00000504409 MPNDQ8N594 471 aa6.9□□□□□ -1.3
LINC02397-201ENST00000504409 PIK3R5Q8WYR1 880 aa6.9□□□□□ -1.3
LINC02397-201ENST00000504409 SAAL1Q96ER3 474 aa6.9□□□□□ -1.3
LINC02397-201ENST00000504409 ATP2A1O14983 1001 aa6.9□□□□□ -1.3
LINC02397-201ENST00000504409 LARP1BQ659C4 914 aaKnown RBP6.9□□□□□ -1.3
LINC02397-201ENST00000504409 KIAA1524Q8TCG1 905 aa6.9□□□□□ -1.3
LINC02397-201ENST00000504409 IQCGQ9H095 443 aaKnown RBP6.9□□□□□ -1.3
LINC02397-201ENST00000504409 UBE4BO95155 1302 aa6.9□□□□□ -1.3
LINC02397-201ENST00000504409 TERF2Q15554 542 aa6.9□□□□□ -1.31
LINC02397-201ENST00000504409 LCA5Q86VQ0 697 aa6.9□□□□□ -1.31
LINC02397-201ENST00000504409 GOLGA6CA6NDK9 693 aa6.9□□□□□ -1.31
LINC02397-201ENST00000504409 CASQ2O14958 399 aaPredicted RBP6.9□□□□□ -1.31
LINC02397-201ENST00000504409 GOLGA6DP0CG33 693 aa6.9□□□□□ -1.31
LINC02397-201ENST00000504409 CHCHD3Q9NX63 227 aaKnown RBP6.9□□□□□ -1.31
LINC02397-201ENST00000504409 GOLGA6AQ9NYA3 693 aa6.9□□□□□ -1.31
LINC02397-201ENST00000504409 EIF3CLB5ME19 914 aaKnown RBP6.9□□□□□ -1.31
LINC02397-201ENST00000504409 NUCB1Q02818 461 aa6.9□□□□□ -1.31
LINC02397-201ENST00000504409 ITIH3Q06033 890 aa6.9□□□□□ -1.31
LINC02397-201ENST00000504409 CCDC186Q7Z3E2 898 aa6.9□□□□□ -1.31
LINC02397-201ENST00000504409 CFAP73A6NFT4 308 aa6.9□□□□□ -1.31
LINC02397-201ENST00000504409 FOXP2O15409 715 aa6.9□□□□□ -1.31
LINC02397-201ENST00000504409 SLC3A2P08195 630 aaKnown RBP6.9□□□□□ -1.31
LINC02397-201ENST00000504409 TUBA4AP68366 448 aa6.9□□□□□ -1.31
LINC02397-201ENST00000504409 NME8Q8N427 588 aa6.9□□□□□ -1.31
LINC02397-201ENST00000504409 E7ENQ6 273 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 SMIM24O75264 130 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 NDUFA13Q9P0J0 144 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 UGGT2Q9NYU1 1516 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 C9orf84Q5VXU9 1444 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 SGSM2O43147 1006 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 CIB2O75838 187 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 CFAP100Q494V2 611 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 MSL3Q8N5Y2 521 aaKnown RBP6.89□□□□□ -1.31
LINC02397-201ENST00000504409 RAB34Q9BZG1 259 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 COG6Q9Y2V7 657 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 MORC2Q9Y6X9 1032 aaPredicted RBP6.89□□□□□ -1.31
LINC02397-201ENST00000504409 ZNF148Q9UQR1 794 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 GNAI2P04899 355 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 TRIM21P19474 475 aaKnown RBP6.89□□□□□ -1.31
LINC02397-201ENST00000504409 NEK1Q96PY6 1258 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 LLPHQ9BRT6 129 aaKnown RBP6.89□□□□□ -1.31
LINC02397-201ENST00000504409 MMRN2Q9H8L6 949 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 AKAP2Q9Y2D5 859 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 SHROOM2Q13796 1616 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 ABCA9Q8IUA7 1624 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 GSTA2P09210 222 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 SLC8A3P57103 927 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 NUP58Q9BVL2 599 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 BHMT2Q9H2M3 363 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 IQGAP2Q13576 1575 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 ABLIM1O14639 778 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 SLC4A8Q2Y0W8 1093 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 SEPT11Q9NVA2 429 aaKnown RBP6.89□□□□□ -1.31
LINC02397-201ENST00000504409 STK24Q9Y6E0 443 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 HIP1RO75146 1068 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 RAB15P59190 212 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 ALS2CLQ60I27 953 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 SPTLC3Q9NUV7 552 aa6.89□□□□□ -1.31
LINC02397-201ENST00000504409 MTRF1LQ9UGC7 380 aaKnown RBP6.89□□□□□ -1.31
LINC02397-201ENST00000504409 URB2Q14146 1524 aaKnown RBP6.89□□□□□ -1.31
LINC02397-201ENST00000504409 GMNNO75496 209 aa6.88□□□□□ -1.31
LINC02397-201ENST00000504409 AMPD3Q01432 767 aa6.88□□□□□ -1.31
LINC02397-201ENST00000504409 IKQ13123 557 aaPredicted RBP6.88□□□□□ -1.31
LINC02397-201ENST00000504409 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.88□□□□□ -1.31
LINC02397-201ENST00000504409 STX6O43752 255 aa6.88□□□□□ -1.31
LINC02397-201ENST00000504409 ZSCAN22P10073 491 aaPredicted RBP6.88□□□□□ -1.31
LINC02397-201ENST00000504409 PSME1Q06323 249 aa6.88□□□□□ -1.31
LINC02397-201ENST00000504409 FYB2Q5VWT5 728 aa6.88□□□□□ -1.31
LINC02397-201ENST00000504409 RUFY3Q7L099 469 aa6.88□□□□□ -1.31
LINC02397-201ENST00000504409 ENAHQ8N8S7 591 aaPredicted RBP6.88□□□□□ -1.31
LINC02397-201ENST00000504409 DDX27Q96GQ7 796 aaKnown RBP6.88□□□□□ -1.31
LINC02397-201ENST00000504409 RRP15Q9Y3B9 282 aaKnown RBP6.88□□□□□ -1.31
LINC02397-201ENST00000504409 GKAP1Q5VSY0 366 aaPredicted RBP6.88□□□□□ -1.31
LINC02397-201ENST00000504409 CWC27Q6UX04 472 aaKnown RBP6.88□□□□□ -1.31
LINC02397-201ENST00000504409 GBP5Q96PP8 586 aa6.88□□□□□ -1.31
LINC02397-201ENST00000504409 URI1O94763 535 aaPredicted RBP6.88□□□□□ -1.31
LINC02397-201ENST00000504409 CHMP4BP1P59074 171 aa6.88□□□□□ -1.31
LINC02397-201ENST00000504409 GJC2Q5T442 439 aaPredicted RBP6.88□□□□□ -1.31
LINC02397-201ENST00000504409 RNF187Q5TA31 235 aaPredicted RBP6.88□□□□□ -1.31
LINC02397-201ENST00000504409 IFT140Q96RY7 1462 aa6.88□□□□□ -1.31
LINC02397-201ENST00000504409 SRRM3A6NNA2 597 aaPredicted RBP6.88□□□□□ -1.31
LINC02397-201ENST00000504409 NDUFAB1O14561 156 aa6.88□□□□□ -1.31
LINC02397-201ENST00000504409 NEBLO76041 1014 aa6.88□□□□□ -1.31
LINC02397-201ENST00000504409 MAP3K7CLP57077 242 aa6.88□□□□□ -1.31
LINC02397-201ENST00000504409 RASEFQ8IZ41 740 aa6.88□□□□□ -1.31
LINC02397-201ENST00000504409 TERB1Q8NA31 727 aa6.88□□□□□ -1.31
LINC02397-201ENST00000504409 ATP2B1P20020 1258 aa6.88□□□□□ -1.31
LINC02397-201ENST00000504409 ME1P48163 572 aa6.88□□□□□ -1.31
LINC02397-201ENST00000504409 SUGP1Q8IWZ8 645 aaKnown RBP6.88□□□□□ -1.31
LINC02397-201ENST00000504409 SAFB2Q14151 953 aaKnown RBP eCLIP6.87□□□□□ -1.31
LINC02397-201ENST00000504409 FERMT1Q9BQL6 677 aa6.87□□□□□ -1.31
LINC02397-201ENST00000504409 DDX41Q9UJV9 622 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms