RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	LILRA1	O75019	489 aa		10.12	□□□□□ -0.79
GARNL3-222	ENST00000498801	FOXC1	Q12948	553 aa		10.12	□□□□□ -0.79
GARNL3-222	ENST00000498801	PRKD2	Q9BZL6	878 aa		10.12	□□□□□ -0.79
GARNL3-222	ENST00000498801	ATRN	O75882	1429 aa		10.12	□□□□□ -0.79
GARNL3-222	ENST00000498801	NWD2	Q9ULI1	1742 aa		10.12	□□□□□ -0.79
GARNL3-222	ENST00000498801	COL14A1	Q05707	1796 aa	Known RBP	10.11	□□□□□ -0.79
GARNL3-222	ENST00000498801	ALDH1A1	P00352	501 aa		10.11	□□□□□ -0.79
GARNL3-222	ENST00000498801	ATP2B4	P23634	1241 aa		10.11	□□□□□ -0.79
GARNL3-222	ENST00000498801	MYT1	Q01538	1121 aa		10.11	□□□□□ -0.79
GARNL3-222	ENST00000498801	ZNF772	Q68DY9	489 aa	Predicted RBP	10.11	□□□□□ -0.79
GARNL3-222	ENST00000498801	NLRP13	Q86W25	1043 aa		10.11	□□□□□ -0.79
GARNL3-222	ENST00000498801	ABTB2	Q8N961	1025 aa		10.11	□□□□□ -0.79
GARNL3-222	ENST00000498801	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
GARNL3-222	ENST00000498801		V9GY48	417 aa	Predicted RBP	10.11	□□□□□ -0.79
GARNL3-222	ENST00000498801	NSD2	O96028	1365 aa		10.11	□□□□□ -0.79
GARNL3-222	ENST00000498801	NRAP	Q86VF7	1730 aa		10.1	□□□□□ -0.79
GARNL3-222	ENST00000498801	SCNN1D	P51172	638 aa		10.1	□□□□□ -0.79
GARNL3-222	ENST00000498801	NNT	Q13423	1086 aa		10.1	□□□□□ -0.79
GARNL3-222	ENST00000498801	ZNF358	Q9NW07	568 aa		10.1	□□□□□ -0.79
GARNL3-222	ENST00000498801	PGPEP1	Q9NXJ5	209 aa		10.1	□□□□□ -0.79
GARNL3-222	ENST00000498801	GNE	Q9Y223	722 aa	Known RBP	10.1	□□□□□ -0.79
GARNL3-222	ENST00000498801	EMILIN1	Q9Y6C2	1016 aa		10.1	□□□□□ -0.79
GARNL3-222	ENST00000498801	AATK	Q6ZMQ8	1374 aa		10.1	□□□□□ -0.79
GARNL3-222	ENST00000498801	KIAA0232	Q92628	1395 aa		10.1	□□□□□ -0.79
GARNL3-222	ENST00000498801	AFF2	P51816	1311 aa		10.09	□□□□□ -0.79
GARNL3-222	ENST00000498801	PLCH1	Q4KWH8	1693 aa		10.09	□□□□□ -0.79
GARNL3-222	ENST00000498801	NSD3	Q9BZ95	1437 aa		10.09	□□□□□ -0.79
GARNL3-222	ENST00000498801	TMEM229A	B2RXF0	380 aa		10.09	□□□□□ -0.79
GARNL3-222	ENST00000498801		M0R2N6	131 aa		10.09	□□□□□ -0.79
GARNL3-222	ENST00000498801	PRMT3	O60678	531 aa		10.09	□□□□□ -0.79
GARNL3-222	ENST00000498801	GC	P02774	474 aa		10.09	□□□□□ -0.79
GARNL3-222	ENST00000498801	CYP2U1	Q7Z449	544 aa		10.09	□□□□□ -0.79
GARNL3-222	ENST00000498801	TSEN2	Q8NCE0	465 aa	Known RBP	10.09	□□□□□ -0.79
GARNL3-222	ENST00000498801	KCNH5	Q8NCM2	988 aa		10.09	□□□□□ -0.79
GARNL3-222	ENST00000498801	CCDC9	Q9Y3X0	531 aa	Known RBP	10.09	□□□□□ -0.79
GARNL3-222	ENST00000498801	ADAMTS2	O95450	1211 aa		10.08	□□□□□ -0.8
GARNL3-222	ENST00000498801	STAU1	O95793	577 aa	Known RBP	10.08	□□□□□ -0.8
GARNL3-222	ENST00000498801	OCLN	Q16625	522 aa		10.08	□□□□□ -0.8
GARNL3-222	ENST00000498801	MEX3C	Q5U5Q3	659 aa	Known RBP	10.08	□□□□□ -0.8
GARNL3-222	ENST00000498801	PANK3	Q9H999	370 aa		10.08	□□□□□ -0.8
GARNL3-222	ENST00000498801	WASF2	Q9Y6W5	498 aa		10.08	□□□□□ -0.8
GARNL3-222	ENST00000498801	RTL1	A6NKG5	1358 aa		10.08	□□□□□ -0.8
GARNL3-222	ENST00000498801	KIF24	Q5T7B8	1368 aa		10.08	□□□□□ -0.8
GARNL3-222	ENST00000498801	NPC1L1	Q9UHC9	1359 aa		10.08	□□□□□ -0.8
GARNL3-222	ENST00000498801	COL5A2	P05997	1499 aa	Predicted RBP	10.07	□□□□□ -0.8
GARNL3-222	ENST00000498801	LGR5	O75473	907 aa		10.07	□□□□□ -0.8
GARNL3-222	ENST00000498801	ADD1	P35611	737 aa	Known RBP	10.07	□□□□□ -0.8
GARNL3-222	ENST00000498801	GDF10	P55107	478 aa		10.07	□□□□□ -0.8
GARNL3-222	ENST00000498801	ARHGEF25	Q86VW2	580 aa		10.07	□□□□□ -0.8
GARNL3-222	ENST00000498801	NME9	Q86XW9	330 aa		10.07	□□□□□ -0.8
GARNL3-222	ENST00000498801	SNIP1	Q8TAD8	396 aa	Known RBP	10.07	□□□□□ -0.8
GARNL3-222	ENST00000498801	PRIMPOL	Q96LW4	560 aa		10.07	□□□□□ -0.8
GARNL3-222	ENST00000498801	C8orf37	Q96NL8	207 aa		10.07	□□□□□ -0.8
GARNL3-222	ENST00000498801	CXXC1	Q9P0U4	656 aa	Predicted RBP	10.07	□□□□□ -0.8
GARNL3-222	ENST00000498801	SMG6	Q86US8	1419 aa	Known RBP	10.07	□□□□□ -0.8
GARNL3-222	ENST00000498801	CGNL1	Q0VF96	1302 aa		10.07	□□□□□ -0.8
GARNL3-222	ENST00000498801	FYB1	O15117	783 aa		10.06	□□□□□ -0.8
GARNL3-222	ENST00000498801	GDF9	O60383	454 aa		10.06	□□□□□ -0.8
GARNL3-222	ENST00000498801	DDX10	Q13206	875 aa	Known RBP	10.06	□□□□□ -0.8
GARNL3-222	ENST00000498801	TMCO4	Q5TGY1	634 aa		10.06	□□□□□ -0.8
GARNL3-222	ENST00000498801	UNC5CL	Q8IV45	518 aa		10.06	□□□□□ -0.8
GARNL3-222	ENST00000498801	C1orf216	Q8TAB5	229 aa		10.06	□□□□□ -0.8
GARNL3-222	ENST00000498801	HINFP	Q9BQA5	517 aa		10.06	□□□□□ -0.8
GARNL3-222	ENST00000498801	ETNK1	Q9HBU6	452 aa		10.06	□□□□□ -0.8
GARNL3-222	ENST00000498801	BLM	P54132	1417 aa	Predicted RBP	10.06	□□□□□ -0.8
GARNL3-222	ENST00000498801	CAMTA1	Q9Y6Y1	1673 aa		10.06	□□□□□ -0.8
GARNL3-222	ENST00000498801	ANKRD26	Q9UPS8	1709 aa		10.05	□□□□□ -0.8
GARNL3-222	ENST00000498801	FAM83G	A6ND36	823 aa		10.05	□□□□□ -0.8
GARNL3-222	ENST00000498801	INHA	P05111	366 aa		10.05	□□□□□ -0.8
GARNL3-222	ENST00000498801	VPS72	Q15906	364 aa		10.05	□□□□□ -0.8
GARNL3-222	ENST00000498801	POTEA	Q6S8J7	498 aa		10.05	□□□□□ -0.8
GARNL3-222	ENST00000498801	NGLY1	Q96IV0	654 aa		10.05	□□□□□ -0.8
GARNL3-222	ENST00000498801	PRDM11	Q9NQV5	511 aa		10.05	□□□□□ -0.8
GARNL3-222	ENST00000498801	USP21	Q9UK80	565 aa		10.05	□□□□□ -0.8
GARNL3-222	ENST00000498801	TRPC5	Q9UL62	973 aa	Predicted RBP	10.05	□□□□□ -0.8
GARNL3-222	ENST00000498801	COL18A1	P39060	1754 aa		10.05	□□□□□ -0.8
GARNL3-222	ENST00000498801	GLI3	P10071	1580 aa		10.05	□□□□□ -0.8
GARNL3-222	ENST00000498801		J3QL48	77 aa		10.04	□□□□□ -0.8
GARNL3-222	ENST00000498801	GNRH1	P01148	92 aa		10.04	□□□□□ -0.8
GARNL3-222	ENST00000498801	ARID4A	P29374	1257 aa	Predicted RBP	10.04	□□□□□ -0.8
GARNL3-222	ENST00000498801	NUTM2G	Q5VZR2	741 aa		10.04	□□□□□ -0.8
GARNL3-222	ENST00000498801	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
GARNL3-222	ENST00000498801	THSD7A	Q9UPZ6	1657 aa		10.03	□□□□□ -0.8
GARNL3-222	ENST00000498801	KIF20B	Q96Q89	1820 aa		10.03	□□□□□ -0.8
GARNL3-222	ENST00000498801	TTC24	A2A3L6	582 aa	Predicted RBP	10.03	□□□□□ -0.8
GARNL3-222	ENST00000498801	TNFRSF10A	O00220	468 aa		10.03	□□□□□ -0.8
GARNL3-222	ENST00000498801	BACH1	O14867	736 aa		10.03	□□□□□ -0.8
GARNL3-222	ENST00000498801	RGS12	O14924	1447 aa		10.03	□□□□□ -0.8
GARNL3-222	ENST00000498801	ADH1A	P07327	375 aa		10.03	□□□□□ -0.8
GARNL3-222	ENST00000498801	WEE1	P30291	646 aa		10.03	□□□□□ -0.8
GARNL3-222	ENST00000498801	SCNN1A	P37088	669 aa		10.03	□□□□□ -0.8
GARNL3-222	ENST00000498801	CYP4X1	Q8N118	509 aa		10.03	□□□□□ -0.8
GARNL3-222	ENST00000498801	COG3	Q96JB2	828 aa		10.03	□□□□□ -0.8
GARNL3-222	ENST00000498801	ARHGEF10L	Q9HCE6	1279 aa		10.03	□□□□□ -0.8
GARNL3-222	ENST00000498801	KNSTRN	Q9Y448	316 aa		10.03	□□□□□ -0.8
GARNL3-222	ENST00000498801	RBM6	P78332	1123 aa	Known RBP	10.02	□□□□□ -0.81
GARNL3-222	ENST00000498801	CBLB	Q13191	982 aa		10.02	□□□□□ -0.81
GARNL3-222	ENST00000498801	TAS1R3	Q7RTX0	852 aa		10.02	□□□□□ -0.81
GARNL3-222	ENST00000498801	ITPKC	Q96DU7	683 aa		10.02	□□□□□ -0.81
GARNL3-222	ENST00000498801	KLF16	Q9BXK1	252 aa	Predicted RBP	10.02	□□□□□ -0.81

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