RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 PUS3Q9BZE2 481 aaKnown RBP24.33■■□□□ 1.49
HDAC4-212ENST00000495497 ANKIB1Q9P2G1 1089 aa24.33■■□□□ 1.49
HDAC4-212ENST00000495497 POLLQ9UGP5 575 aa24.33■■□□□ 1.49
HDAC4-212ENST00000495497 HDAC5Q9UQL6 1122 aa24.33■■□□□ 1.49
HDAC4-212ENST00000495497 CHD4Q14839 1912 aa24.32■■□□□ 1.48
HDAC4-212ENST00000495497 LRRC37AA6NMS7 1700 aa24.32■■□□□ 1.48
HDAC4-212ENST00000495497 C6orf229H3BNL8 230 aa24.31■■□□□ 1.48
HDAC4-212ENST00000495497 SBF1O95248 1867 aa24.31■■□□□ 1.48
HDAC4-212ENST00000495497 RFX5P48382 616 aaPredicted RBP24.31■■□□□ 1.48
HDAC4-212ENST00000495497 PDE3AQ14432 1141 aa24.31■■□□□ 1.48
HDAC4-212ENST00000495497 LDHAL6AQ6ZMR3 332 aa24.31■■□□□ 1.48
HDAC4-212ENST00000495497 TBC1D16Q8TBP0 767 aa24.31■■□□□ 1.48
HDAC4-212ENST00000495497 PODXL2Q9NZ53 605 aa24.31■■□□□ 1.48
HDAC4-212ENST00000495497 SPEF2Q9C093 1822 aa24.31■■□□□ 1.48
HDAC4-212ENST00000495497 CHRNDQ07001 517 aa24.3■■□□□ 1.48
HDAC4-212ENST00000495497 AOC3Q16853 763 aa24.3■■□□□ 1.48
HDAC4-212ENST00000495497 SUPT20HQ8NEM7 779 aa24.3■■□□□ 1.48
HDAC4-212ENST00000495497 HELBQ8NG08 1087 aaPredicted RBP24.3■■□□□ 1.48
HDAC4-212ENST00000495497 CNNM1Q9NRU3 951 aa24.3■■□□□ 1.48
HDAC4-212ENST00000495497 DUOX1Q9NRD9 1551 aa24.29■■□□□ 1.48
HDAC4-212ENST00000495497 PPIP5K2O43314 1243 aa24.29■■□□□ 1.48
HDAC4-212ENST00000495497 UFL1O94874 794 aa24.29■■□□□ 1.48
HDAC4-212ENST00000495497 LRRC24Q50LG9 513 aa24.29■■□□□ 1.48
HDAC4-212ENST00000495497 GGA1Q9UJY5 639 aa24.29■■□□□ 1.48
HDAC4-212ENST00000495497 XDHP47989 1333 aa24.29■■□□□ 1.48
HDAC4-212ENST00000495497 RIMBP2O15034 1052 aa24.28■■□□□ 1.48
HDAC4-212ENST00000495497 TAF5LO75529 589 aa24.28■■□□□ 1.48
HDAC4-212ENST00000495497 PTPN12Q05209 780 aaKnown RBP24.28■■□□□ 1.48
HDAC4-212ENST00000495497 LARGE2Q8N3Y3 721 aa24.28■■□□□ 1.48
HDAC4-212ENST00000495497 DDX19BQ9UMR2 479 aa24.28■■□□□ 1.48
HDAC4-212ENST00000495497 SNAP23O00161 211 aa24.27■■□□□ 1.48
HDAC4-212ENST00000495497 PA2G4Q9UQ80 394 aaKnown RBP24.27■■□□□ 1.48
HDAC4-212ENST00000495497 COL4A5P29400 1685 aa24.27■■□□□ 1.48
HDAC4-212ENST00000495497 PNMA6EA0A0J9YXQ4 647 aa24.26■■□□□ 1.47
HDAC4-212ENST00000495497 SRGAP3O43295 1099 aa24.26■■□□□ 1.47
HDAC4-212ENST00000495497 ATP2B4P23634 1241 aa24.26■■□□□ 1.47
HDAC4-212ENST00000495497 WASHC4Q2M389 1173 aa24.26■■□□□ 1.47
HDAC4-212ENST00000495497 ANKRD2Q9GZV1 360 aa24.26■■□□□ 1.47
HDAC4-212ENST00000495497 CCDC88AQ3V6T2 1871 aa24.26■■□□□ 1.47
HDAC4-212ENST00000495497 LTBP1Q14766 1721 aa24.25■■□□□ 1.47
HDAC4-212ENST00000495497 KIAA2012Q0VF49 1180 aa24.25■■□□□ 1.47
HDAC4-212ENST00000495497 MTX1Q13505 466 aa24.25■■□□□ 1.47
HDAC4-212ENST00000495497 ZNF526Q8TF50 670 aaPredicted RBP24.25■■□□□ 1.47
HDAC4-212ENST00000495497 SIL1Q9H173 461 aa24.25■■□□□ 1.47
HDAC4-212ENST00000495497 RIPOR2Q9Y4F9 1068 aa24.25■■□□□ 1.47
HDAC4-212ENST00000495497 JDP2Q8WYK2 163 aa24.24■■□□□ 1.47
HDAC4-212ENST00000495497 EYA3Q99504 573 aa24.24■■□□□ 1.47
HDAC4-212ENST00000495497 ATP8B2P98198 1209 aa24.23■■□□□ 1.47
HDAC4-212ENST00000495497 VPS33BQ9H267 617 aa24.23■■□□□ 1.47
HDAC4-212ENST00000495497 ZBTB40Q9NUA8 1239 aa24.23■■□□□ 1.47
HDAC4-212ENST00000495497 SUPT16HQ9Y5B9 1047 aaKnown RBP24.23■■□□□ 1.47
HDAC4-212ENST00000495497 EYA2O00167 538 aa24.22■■□□□ 1.47
HDAC4-212ENST00000495497 DOK7Q18PE1 504 aa24.22■■□□□ 1.47
HDAC4-212ENST00000495497 NIM1KQ8IY84 436 aa24.22■■□□□ 1.47
HDAC4-212ENST00000495497 ZC3H12CQ9C0D7 883 aaKnown RBP24.22■■□□□ 1.47
HDAC4-212ENST00000495497 LEMD3Q9Y2U8 911 aa24.22■■□□□ 1.47
HDAC4-212ENST00000495497 ZNF804BA4D1E1 1349 aa24.21■■□□□ 1.47
HDAC4-212ENST00000495497 ZNF541Q9H0D2 1346 aa24.21■■□□□ 1.47
HDAC4-212ENST00000495497 FZD9O00144 591 aa24.21■■□□□ 1.47
HDAC4-212ENST00000495497 KLRK1P26718 216 aa24.21■■□□□ 1.47
HDAC4-212ENST00000495497 KCNJ4P48050 445 aa24.21■■□□□ 1.47
HDAC4-212ENST00000495497 METTL24Q5JXM2 366 aa24.21■■□□□ 1.47
HDAC4-212ENST00000495497 ATG9AQ7Z3C6 839 aa24.21■■□□□ 1.47
HDAC4-212ENST00000495497 ZNF784Q8NCA9 323 aaPredicted RBP24.21■■□□□ 1.47
HDAC4-212ENST00000495497 DBNDD1Q9H9R9 158 aa24.21■■□□□ 1.47
HDAC4-212ENST00000495497 CEP85Q6P2H3 762 aa24.2■■□□□ 1.46
HDAC4-212ENST00000495497 TXNRD3Q86VQ6 643 aa24.2■■□□□ 1.46
HDAC4-212ENST00000495497 COPRSQ9NQ92 184 aa24.2■■□□□ 1.46
HDAC4-212ENST00000495497 TIAM2Q8IVF5 1701 aa24.2■■□□□ 1.46
HDAC4-212ENST00000495497 MROH5Q6ZUA9 1318 aa24.19■■□□□ 1.46
HDAC4-212ENST00000495497 ZC3H4Q9UPT8 1303 aaKnown RBP24.19■■□□□ 1.46
HDAC4-212ENST00000495497 CRBNQ96SW2 442 aa24.19■■□□□ 1.46
HDAC4-212ENST00000495497 DICER1Q9UPY3 1922 aaKnown RBP24.19■■□□□ 1.46
HDAC4-212ENST00000495497 YDJCA8MPS7 323 aa24.18■■□□□ 1.46
HDAC4-212ENST00000495497 POLA2Q14181 598 aa24.18■■□□□ 1.46
HDAC4-212ENST00000495497 ZNRF3Q9ULT6 936 aa24.18■■□□□ 1.46
HDAC4-212ENST00000495497 GLTPD2A6NH11 291 aa24.17■■□□□ 1.46
HDAC4-212ENST00000495497 ECE2O60344 883 aa24.17■■□□□ 1.46
HDAC4-212ENST00000495497 DDNO94850 711 aaPredicted RBP24.17■■□□□ 1.46
HDAC4-212ENST00000495497 VGLL2Q8N8G2 317 aa24.17■■□□□ 1.46
HDAC4-212ENST00000495497 SSH3Q8TE77 659 aa24.17■■□□□ 1.46
HDAC4-212ENST00000495497 KCNQ5Q9NR82 932 aa24.17■■□□□ 1.46
HDAC4-212ENST00000495497 MED23Q9ULK4 1368 aa24.16■■□□□ 1.46
HDAC4-212ENST00000495497 CIAO1O76071 339 aa24.16■■□□□ 1.46
HDAC4-212ENST00000495497 EIF6P56537 245 aaKnown RBP24.16■■□□□ 1.46
HDAC4-212ENST00000495497 CHMP4BQ9H444 224 aaKnown RBP24.16■■□□□ 1.46
HDAC4-212ENST00000495497 IRS2Q9Y4H2 1338 aa24.15■■□□□ 1.46
HDAC4-212ENST00000495497 G3V3G9 751 aa24.15■■□□□ 1.46
HDAC4-212ENST00000495497 RAD17O75943 681 aa24.15■■□□□ 1.46
HDAC4-212ENST00000495497 PDE8BO95263 885 aa24.15■■□□□ 1.46
HDAC4-212ENST00000495497 DCAF8Q5TAQ9 597 aa24.15■■□□□ 1.46
HDAC4-212ENST00000495497 DPY19L2Q6NUT2 758 aa24.15■■□□□ 1.46
HDAC4-212ENST00000495497 FBXO3Q9UK99 471 aa24.15■■□□□ 1.46
HDAC4-212ENST00000495497 GJA3Q9Y6H8 435 aa24.15■■□□□ 1.46
HDAC4-212ENST00000495497 IL15P40933 162 aaPredicted RBP24.14■■□□□ 1.45
HDAC4-212ENST00000495497 CXCL9Q07325 125 aa24.14■■□□□ 1.45
HDAC4-212ENST00000495497 A0A1B0GUL6 1792 aa24.14■■□□□ 1.45
HDAC4-212ENST00000495497 UBE4AQ14139 1066 aa24.13■■□□□ 1.45
HDAC4-212ENST00000495497 SIRT2Q8IXJ6 389 aa24.13■■□□□ 1.45
HDAC4-212ENST00000495497 GPBP1L1Q9HC44 474 aaPredicted RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms