RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 COL14A1Q05707 1796 aaKnown RBP9.5□□□□□ -0.89
TMEM39A-209ENST00000486235 RGPD1P0DJD0 1748 aa9.49□□□□□ -0.89
TMEM39A-209ENST00000486235 TRPM3Q9HCF6 1732 aaPredicted RBP9.49□□□□□ -0.89
TMEM39A-209ENST00000486235 TRIM37O94972 964 aa9.49□□□□□ -0.89
TMEM39A-209ENST00000486235 CHRNA2Q15822 529 aa9.49□□□□□ -0.89
TMEM39A-209ENST00000486235 NGDNQ8NEJ9 315 aaKnown RBP9.49□□□□□ -0.89
TMEM39A-209ENST00000486235 STRN4Q9NRL3 753 aa9.49□□□□□ -0.89
TMEM39A-209ENST00000486235 DISP2A7MBM2 1401 aa9.48□□□□□ -0.89
TMEM39A-209ENST00000486235 DLC1Q96QB1 1528 aa9.48□□□□□ -0.89
TMEM39A-209ENST00000486235 MX2P20592 715 aa9.48□□□□□ -0.89
TMEM39A-209ENST00000486235 CAMKK2Q96RR4 588 aa9.48□□□□□ -0.89
TMEM39A-209ENST00000486235 ADGRB2O60241 1585 aa9.47□□□□□ -0.89
TMEM39A-209ENST00000486235 APBA3O96018 575 aa9.47□□□□□ -0.89
TMEM39A-209ENST00000486235 PHKA2P46019 1235 aa9.47□□□□□ -0.89
TMEM39A-209ENST00000486235 FOXK2Q01167 660 aa9.47□□□□□ -0.89
TMEM39A-209ENST00000486235 NUTM2GQ5VZR2 741 aa9.47□□□□□ -0.89
TMEM39A-209ENST00000486235 TAS1R3Q7RTX0 852 aa9.47□□□□□ -0.89
TMEM39A-209ENST00000486235 BEND7Q8N7W2 519 aaPredicted RBP9.47□□□□□ -0.89
TMEM39A-209ENST00000486235 DCAF5Q96JK2 942 aa9.47□□□□□ -0.89
TMEM39A-209ENST00000486235 NUCKS1Q9H1E3 243 aaKnown RBP9.47□□□□□ -0.89
TMEM39A-209ENST00000486235 GPAMQ9HCL2 828 aa9.47□□□□□ -0.89
TMEM39A-209ENST00000486235 USP35Q9P2H5 1018 aa9.47□□□□□ -0.89
TMEM39A-209ENST00000486235 ALS2Q96Q42 1657 aa9.47□□□□□ -0.89
TMEM39A-209ENST00000486235 THSD7AQ9UPZ6 1657 aa9.47□□□□□ -0.89
TMEM39A-209ENST00000486235 SPATA31A1Q5TZJ5 1347 aa9.47□□□□□ -0.89
TMEM39A-209ENST00000486235 TNS1Q9HBL0 1735 aaKnown RBP9.47□□□□□ -0.89
TMEM39A-209ENST00000486235 KIAA0232Q92628 1395 aa9.47□□□□□ -0.89
TMEM39A-209ENST00000486235 PHF20L1A8MW92 1017 aa9.46□□□□□ -0.9
TMEM39A-209ENST00000486235 WASLO00401 505 aaPredicted RBP9.46□□□□□ -0.9
TMEM39A-209ENST00000486235 F11P03951 625 aa9.46□□□□□ -0.9
TMEM39A-209ENST00000486235 ZC3H6P61129 1189 aaKnown RBP9.46□□□□□ -0.9
TMEM39A-209ENST00000486235 FAM196AQ6ZSG2 479 aa9.46□□□□□ -0.9
TMEM39A-209ENST00000486235 PODNQ7Z5L7 613 aa9.46□□□□□ -0.9
TMEM39A-209ENST00000486235 EIF3AQ14152 1382 aaKnown RBP9.46□□□□□ -0.9
TMEM39A-209ENST00000486235 TULP4Q9NRJ4 1543 aa9.46□□□□□ -0.9
TMEM39A-209ENST00000486235 ADGRB1O14514 1584 aa9.46□□□□□ -0.9
TMEM39A-209ENST00000486235 SPATA31C2B4DYI2 1134 aa9.45□□□□□ -0.9
TMEM39A-209ENST00000486235 TRAK2O60296 914 aa9.45□□□□□ -0.9
TMEM39A-209ENST00000486235 YY1P25490 414 aa9.45□□□□□ -0.9
TMEM39A-209ENST00000486235 PLA2G4EQ3MJ16 856 aa9.45□□□□□ -0.9
TMEM39A-209ENST00000486235 EVA1CP58658 441 aa9.44□□□□□ -0.9
TMEM39A-209ENST00000486235 CENPCQ03188 943 aa9.44□□□□□ -0.9
TMEM39A-209ENST00000486235 PDE3BQ13370 1112 aa9.44□□□□□ -0.9
TMEM39A-209ENST00000486235 CNKSR1Q969H4 720 aa9.44□□□□□ -0.9
TMEM39A-209ENST00000486235 CDCA7Q9BWT1 371 aaPredicted RBP9.44□□□□□ -0.9
TMEM39A-209ENST00000486235 ZNF330Q9Y3S2 320 aaPredicted RBP9.44□□□□□ -0.9
TMEM39A-209ENST00000486235 CRYBG1Q9Y4K1 1723 aa9.44□□□□□ -0.9
TMEM39A-209ENST00000486235 MSTNO14793 375 aa9.43□□□□□ -0.9
TMEM39A-209ENST00000486235 GPR37L1O60883 481 aa9.43□□□□□ -0.9
TMEM39A-209ENST00000486235 IL2RAP01589 272 aa9.43□□□□□ -0.9
TMEM39A-209ENST00000486235 MCCD1P59942 119 aaPredicted RBP9.43□□□□□ -0.9
TMEM39A-209ENST00000486235 MTMR14Q8NCE2 650 aa9.43□□□□□ -0.9
TMEM39A-209ENST00000486235 NUDT16Q96DE0 195 aaKnown RBP9.43□□□□□ -0.9
TMEM39A-209ENST00000486235 NSFL1CQ9UNZ2 370 aaKnown RBP9.43□□□□□ -0.9
TMEM39A-209ENST00000486235 SSH2Q76I76 1423 aa9.42□□□□□ -0.9
TMEM39A-209ENST00000486235 PARD3Q8TEW0 1356 aa9.42□□□□□ -0.9
TMEM39A-209ENST00000486235 ITGB2P05107 769 aa9.42□□□□□ -0.9
TMEM39A-209ENST00000486235 THBS1P07996 1170 aa9.42□□□□□ -0.9
TMEM39A-209ENST00000486235 NBPF8Q3BBV2 869 aa9.42□□□□□ -0.9
TMEM39A-209ENST00000486235 WDR44Q5JSH3 913 aa9.42□□□□□ -0.9
TMEM39A-209ENST00000486235 LARP1Q6PKG0 1096 aaKnown RBP9.42□□□□□ -0.9
TMEM39A-209ENST00000486235 DCAF11Q8TEB1 546 aa9.42□□□□□ -0.9
TMEM39A-209ENST00000486235 ESYT1Q9BSJ8 1104 aa9.42□□□□□ -0.9
TMEM39A-209ENST00000486235 SNRKQ9NRH2 765 aa9.42□□□□□ -0.9
TMEM39A-209ENST00000486235 PPP1R1BQ9UD71 204 aaPredicted RBP9.42□□□□□ -0.9
TMEM39A-209ENST00000486235 ATP7BP35670 1465 aa9.41□□□□□ -0.9
TMEM39A-209ENST00000486235 OIP5O43482 229 aa9.41□□□□□ -0.9
TMEM39A-209ENST00000486235 GNRH1P01148 92 aa9.41□□□□□ -0.9
TMEM39A-209ENST00000486235 CCDC85AQ96PX6 553 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-209ENST00000486235 SPOCK3Q9BQ16 436 aa9.41□□□□□ -0.9
TMEM39A-209ENST00000486235 OXCT2Q9BYC2 517 aaPredicted RBP9.41□□□□□ -0.9
TMEM39A-209ENST00000486235 NDUFB9Q9Y6M9 179 aa9.41□□□□□ -0.9
TMEM39A-209ENST00000486235 PHRF1Q9P1Y6 1649 aaKnown RBP9.41□□□□□ -0.9
TMEM39A-209ENST00000486235 SNRPNP63162 240 aaKnown RBP9.4□□□□□ -0.9
TMEM39A-209ENST00000486235 TCP11L2Q8N4U5 519 aa9.4□□□□□ -0.9
TMEM39A-209ENST00000486235 ZSCAN10Q96SZ4 725 aaPredicted RBP9.4□□□□□ -0.9
TMEM39A-209ENST00000486235 SPON1Q9HCB6 807 aa9.4□□□□□ -0.9
TMEM39A-209ENST00000486235 CEP126Q9P2H0 1117 aa9.4□□□□□ -0.9
TMEM39A-209ENST00000486235 NUP188Q5SRE5 1749 aa9.39□□□□□ -0.91
TMEM39A-209ENST00000486235 RREB1Q92766 1687 aa9.39□□□□□ -0.91
TMEM39A-209ENST00000486235 ACEP12821 1306 aa9.39□□□□□ -0.91
TMEM39A-209ENST00000486235 ZBTB7CA1YPR0 619 aa9.39□□□□□ -0.91
TMEM39A-209ENST00000486235 KCNQ2O43526 872 aa9.39□□□□□ -0.91
TMEM39A-209ENST00000486235 STAU1O95793 577 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-209ENST00000486235 MYCP01106 439 aaPredicted RBP9.39□□□□□ -0.91
TMEM39A-209ENST00000486235 TMEM132AQ24JP5 1023 aa9.39□□□□□ -0.91
TMEM39A-209ENST00000486235 TSGA10IPQ3SY00 556 aa9.39□□□□□ -0.91
TMEM39A-209ENST00000486235 TMEM214Q6NUQ4 689 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-209ENST00000486235 ABTB2Q8N961 1025 aa9.39□□□□□ -0.91
TMEM39A-209ENST00000486235 ZNF592Q92610 1267 aa9.39□□□□□ -0.91
TMEM39A-209ENST00000486235 CDK19Q9BWU1 502 aa9.39□□□□□ -0.91
TMEM39A-209ENST00000486235 RUBCNLQ9H714 662 aa9.39□□□□□ -0.91
TMEM39A-209ENST00000486235 CAMTA1Q9Y6Y1 1673 aa9.39□□□□□ -0.91
TMEM39A-209ENST00000486235 SHISA8B8ZZ34 492 aa9.38□□□□□ -0.91
TMEM39A-209ENST00000486235 C1orf229Q6ZS94 237 aaPredicted RBP9.38□□□□□ -0.91
TMEM39A-209ENST00000486235 HOMEZQ8IX15 550 aa9.38□□□□□ -0.91
TMEM39A-209ENST00000486235 GALNT6Q8NCL4 622 aa9.38□□□□□ -0.91
TMEM39A-209ENST00000486235 BANK1Q8NDB2 785 aa9.38□□□□□ -0.91
TMEM39A-209ENST00000486235 KLRG1Q96E93 195 aa9.38□□□□□ -0.91
TMEM39A-209ENST00000486235 RAB3GAP2Q9H2M9 1393 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms