RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TWISTNBQ3B726 338 aaPredicted RBP23.21■■□□□ 1.31
ATG4B-221ENST00000483778 SAMD7Q7Z3H4 446 aa23.21■■□□□ 1.31
ATG4B-221ENST00000483778 MICALL2Q8IY33 904 aa23.21■■□□□ 1.31
ATG4B-221ENST00000483778 CWF19L2Q2TBE0 894 aaKnown RBP23.2■■□□□ 1.3
ATG4B-221ENST00000483778 MRS2Q9HD23 443 aa23.2■■□□□ 1.3
ATG4B-221ENST00000483778 SLC4A2P04920 1241 aa23.19■■□□□ 1.3
ATG4B-221ENST00000483778 CCDC152Q4G0S7 254 aa23.19■■□□□ 1.3
ATG4B-221ENST00000483778 CYP4F22Q6NT55 531 aa23.19■■□□□ 1.3
ATG4B-221ENST00000483778 PODXL2Q9NZ53 605 aa23.19■■□□□ 1.3
ATG4B-221ENST00000483778 CACNA1FO60840 1977 aa23.18■■□□□ 1.3
ATG4B-221ENST00000483778 CDHR2Q9BYE9 1310 aa23.18■■□□□ 1.3
ATG4B-221ENST00000483778 CAPNS2Q96L46 248 aa23.18■■□□□ 1.3
ATG4B-221ENST00000483778 ZNF316A6NFI3 1004 aaPredicted RBP23.17■■□□□ 1.3
ATG4B-221ENST00000483778 H7C1D1 291 aa23.17■■□□□ 1.3
ATG4B-221ENST00000483778 UFL1O94874 794 aa23.17■■□□□ 1.3
ATG4B-221ENST00000483778 CELF2O95319 508 aaKnown RBP23.17■■□□□ 1.3
ATG4B-221ENST00000483778 GRM1Q13255 1194 aa23.17■■□□□ 1.3
ATG4B-221ENST00000483778 TBC1D10BQ4KMP7 808 aaPredicted RBP23.17■■□□□ 1.3
ATG4B-221ENST00000483778 USP48Q86UV5 1035 aa23.17■■□□□ 1.3
ATG4B-221ENST00000483778 TTLL11Q8NHH1 800 aa23.17■■□□□ 1.3
ATG4B-221ENST00000483778 DPF2Q92785 391 aa23.17■■□□□ 1.3
ATG4B-221ENST00000483778 ANKIB1Q9P2G1 1089 aa23.17■■□□□ 1.3
ATG4B-221ENST00000483778 TLL2Q9Y6L7 1015 aa23.17■■□□□ 1.3
ATG4B-221ENST00000483778 IL16Q14005 1332 aa23.16■■□□□ 1.3
ATG4B-221ENST00000483778 NEURL1BA8MQ27 555 aa23.16■■□□□ 1.3
ATG4B-221ENST00000483778 RBM26Q5T8P6 1007 aaKnown RBP23.16■■□□□ 1.3
ATG4B-221ENST00000483778 ZC3H15Q8WU90 426 aaKnown RBP23.16■■□□□ 1.3
ATG4B-221ENST00000483778 EYA3Q99504 573 aa23.16■■□□□ 1.3
ATG4B-221ENST00000483778 STK31Q9BXU1 1019 aa23.16■■□□□ 1.3
ATG4B-221ENST00000483778 ZC3H12CQ9C0D7 883 aaKnown RBP23.16■■□□□ 1.3
ATG4B-221ENST00000483778 PSME4Q14997 1843 aa23.15■■□□□ 1.3
ATG4B-221ENST00000483778 AOC2O75106 756 aa23.15■■□□□ 1.3
ATG4B-221ENST00000483778 LBX1P52954 281 aa23.15■■□□□ 1.3
ATG4B-221ENST00000483778 CTSWP56202 376 aa23.15■■□□□ 1.3
ATG4B-221ENST00000483778 PAXIP1Q6ZW49 1069 aaPredicted RBP23.15■■□□□ 1.3
ATG4B-221ENST00000483778 GREM2Q9H772 168 aa23.15■■□□□ 1.3
ATG4B-221ENST00000483778 SPINK5Q9NQ38 1064 aaPredicted RBP23.15■■□□□ 1.3
ATG4B-221ENST00000483778 GGA1Q9UJY5 639 aa23.15■■□□□ 1.3
ATG4B-221ENST00000483778 FANCIQ9NVI1 1328 aa23.14■■□□□ 1.3
ATG4B-221ENST00000483778 H7C1W4 665 aa23.14■■□□□ 1.29
ATG4B-221ENST00000483778 VIL1P09327 827 aaKnown RBP23.14■■□□□ 1.29
ATG4B-221ENST00000483778 HSP90B1P14625 803 aaKnown RBP23.14■■□□□ 1.29
ATG4B-221ENST00000483778 CTCFP49711 727 aaPredicted RBP23.14■■□□□ 1.29
ATG4B-221ENST00000483778 SAPCD2Q86UD0 394 aa23.14■■□□□ 1.29
ATG4B-221ENST00000483778 ANKRD18AQ8IVF6 992 aa23.14■■□□□ 1.29
ATG4B-221ENST00000483778 CHMP4AQ9BY43 222 aa23.14■■□□□ 1.29
ATG4B-221ENST00000483778 ZNF408Q9H9D4 720 aa23.14■■□□□ 1.29
ATG4B-221ENST00000483778 VAMP4O75379 141 aa23.13■■□□□ 1.29
ATG4B-221ENST00000483778 AIDAQ96BJ3 306 aa23.13■■□□□ 1.29
ATG4B-221ENST00000483778 ASTN2O75129 1339 aaPredicted RBP23.12■■□□□ 1.29
ATG4B-221ENST00000483778 THSD7BQ9C0I4 1608 aa23.12■■□□□ 1.29
ATG4B-221ENST00000483778 ANP32CO43423 234 aa23.12■■□□□ 1.29
ATG4B-221ENST00000483778 HSPA8P11142 646 aaKnown RBP23.12■■□□□ 1.29
ATG4B-221ENST00000483778 EXOSC9Q06265 439 aaKnown RBP23.12■■□□□ 1.29
ATG4B-221ENST00000483778 CDC37L1Q7L3B6 337 aa23.12■■□□□ 1.29
ATG4B-221ENST00000483778 UBE3BQ7Z3V4 1068 aa23.12■■□□□ 1.29
ATG4B-221ENST00000483778 PRDM10Q9NQV6 1147 aa23.12■■□□□ 1.29
ATG4B-221ENST00000483778 NEXNQ0ZGT2 675 aa23.11■■□□□ 1.29
ATG4B-221ENST00000483778 FLIIQ13045 1269 aa23.11■■□□□ 1.29
ATG4B-221ENST00000483778 MINPP1Q9UNW1 487 aa23.11■■□□□ 1.29
ATG4B-221ENST00000483778 RPS12P25398 132 aaKnown RBP23.1■■□□□ 1.29
ATG4B-221ENST00000483778 ZEB1P37275 1124 aaPredicted RBP23.1■■□□□ 1.29
ATG4B-221ENST00000483778 CASP7P55210 303 aa23.1■■□□□ 1.29
ATG4B-221ENST00000483778 GCKRQ14397 625 aa23.1■■□□□ 1.29
ATG4B-221ENST00000483778 NCBP3Q53F19 620 aaKnown RBP23.1■■□□□ 1.29
ATG4B-221ENST00000483778 ZNF646O15015 1829 aaPredicted RBP23.1■■□□□ 1.29
ATG4B-221ENST00000483778 XDHP47989 1333 aa23.09■■□□□ 1.29
ATG4B-221ENST00000483778 G3V3G9 751 aa23.09■■□□□ 1.29
ATG4B-221ENST00000483778 MAP2K1Q02750 393 aaPredicted RBP23.09■■□□□ 1.29
ATG4B-221ENST00000483778 DCAF8Q5TAQ9 597 aa23.09■■□□□ 1.29
ATG4B-221ENST00000483778 WDR63Q8IWG1 891 aa23.09■■□□□ 1.29
ATG4B-221ENST00000483778 ADM5C9JUS6 153 aa23.08■■□□□ 1.29
ATG4B-221ENST00000483778 ECE1P42892 770 aa23.08■■□□□ 1.29
ATG4B-221ENST00000483778 ZIC5Q96T25 663 aa23.08■■□□□ 1.29
ATG4B-221ENST00000483778 GMLQ99445 158 aa23.08■■□□□ 1.29
ATG4B-221ENST00000483778 BSDC1Q9NW68 430 aaPredicted RBP23.08■■□□□ 1.29
ATG4B-221ENST00000483778 ATP2B4P23634 1241 aa23.07■■□□□ 1.28
ATG4B-221ENST00000483778 FKBP5Q13451 457 aaPredicted RBP23.07■■□□□ 1.28
ATG4B-221ENST00000483778 KRT26Q7Z3Y9 468 aa23.07■■□□□ 1.28
ATG4B-221ENST00000483778 TXNRD3Q86VQ6 643 aa23.07■■□□□ 1.28
ATG4B-221ENST00000483778 DNAAF4Q8WXU2 420 aa23.07■■□□□ 1.28
ATG4B-221ENST00000483778 CDC5LQ99459 802 aaKnown RBP23.07■■□□□ 1.28
ATG4B-221ENST00000483778 TSKSQ9UJT2 592 aa23.07■■□□□ 1.28
ATG4B-221ENST00000483778 F6X3S4 739 aa23.06■■□□□ 1.28
ATG4B-221ENST00000483778 KIF4BQ2VIQ3 1234 aa23.06■■□□□ 1.28
ATG4B-221ENST00000483778 RSBN1LQ6PCB5 846 aaPredicted RBP23.06■■□□□ 1.28
ATG4B-221ENST00000483778 MXD3Q9BW11 206 aa23.06■■□□□ 1.28
ATG4B-221ENST00000483778 CASP8AP2Q9UKL3 1982 aa23.06■■□□□ 1.28
ATG4B-221ENST00000483778 ZNF280AP59817 542 aaPredicted RBP23.05■■□□□ 1.28
ATG4B-221ENST00000483778 FAM9BQ8IZU0 186 aa23.05■■□□□ 1.28
ATG4B-221ENST00000483778 CSF1RP07333 972 aa23.04■■□□□ 1.28
ATG4B-221ENST00000483778 KLRK1P26718 216 aa23.04■■□□□ 1.28
ATG4B-221ENST00000483778 CCT4P50991 539 aaKnown RBP23.04■■□□□ 1.28
ATG4B-221ENST00000483778 FAM161AQ3B820 660 aa23.04■■□□□ 1.28
ATG4B-221ENST00000483778 LINS1Q8NG48 757 aa23.04■■□□□ 1.28
ATG4B-221ENST00000483778 PLA2G12BQ9BX93 195 aa23.04■■□□□ 1.28
ATG4B-221ENST00000483778 SCAF8Q9UPN6 1271 aaKnown RBP23.04■■□□□ 1.28
ATG4B-221ENST00000483778 ITGA6P23229 1130 aa23.03■■□□□ 1.28
ATG4B-221ENST00000483778 MAP2K2P36507 400 aa23.03■■□□□ 1.28
ATG4B-221ENST00000483778 DCPSQ96C86 337 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms