RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 PKD1L2Q7Z442 2459 aa9.26□□□□□ -0.93
HDAC3-206ENST00000471968 FOSL2P15408 326 aa9.25□□□□□ -0.93
HDAC3-206ENST00000471968 TNNT2P45379 298 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-206ENST00000471968 AMOTQ4VCS5 1084 aa9.25□□□□□ -0.93
HDAC3-206ENST00000471968 UHRF1Q96T88 793 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-206ENST00000471968 RNF208Q9H0X6 261 aa9.25□□□□□ -0.93
HDAC3-206ENST00000471968 SLC52A2Q9HAB3 445 aa9.25□□□□□ -0.93
HDAC3-206ENST00000471968 NIP7Q9Y221 180 aaKnown RBP eCLIP9.25□□□□□ -0.93
HDAC3-206ENST00000471968 CCL5P13501 91 aa9.24□□□□□ -0.93
HDAC3-206ENST00000471968 PRKG1Q13976 671 aa9.24□□□□□ -0.93
HDAC3-206ENST00000471968 SCARF1Q14162 830 aa9.24□□□□□ -0.93
HDAC3-206ENST00000471968 DPP8Q6V1X1 898 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-206ENST00000471968 U2AF1L4Q8WU68 220 aaKnown RBP9.24□□□□□ -0.93
HDAC3-206ENST00000471968 RTFDC1Q9BY42 306 aaPredicted RBP9.24□□□□□ -0.93
HDAC3-206ENST00000471968 ABCC12Q96J65 1359 aa9.24□□□□□ -0.93
HDAC3-206ENST00000471968 RIC1Q4ADV7 1423 aa9.23□□□□□ -0.93
HDAC3-206ENST00000471968 RPS12P25398 132 aaKnown RBP9.23□□□□□ -0.93
HDAC3-206ENST00000471968 HOXA10P31260 410 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-206ENST00000471968 OTUD7BQ6GQQ9 843 aa9.23□□□□□ -0.93
HDAC3-206ENST00000471968 ZNF652Q9Y2D9 606 aa9.23□□□□□ -0.93
HDAC3-206ENST00000471968 KIF7Q2M1P5 1343 aa9.23□□□□□ -0.93
HDAC3-206ENST00000471968 ROCK2O75116 1388 aaKnown RBP9.23□□□□□ -0.93
HDAC3-206ENST00000471968 A1BGP04217 495 aa9.22□□□□□ -0.93
HDAC3-206ENST00000471968 NF2P35240 595 aa9.22□□□□□ -0.93
HDAC3-206ENST00000471968 CLEC4GQ6UXB4 293 aa9.22□□□□□ -0.93
HDAC3-206ENST00000471968 USP38Q8NB14 1042 aa9.22□□□□□ -0.93
HDAC3-206ENST00000471968 RBM17Q96I25 401 aaKnown RBP9.22□□□□□ -0.93
HDAC3-206ENST00000471968 CRAMP1Q96RY5 1269 aa9.22□□□□□ -0.93
HDAC3-206ENST00000471968 ARHGAP39Q9C0H5 1083 aa9.22□□□□□ -0.93
HDAC3-206ENST00000471968 SEMA6BQ9H3T3 888 aa9.22□□□□□ -0.93
HDAC3-206ENST00000471968 ATP6V0A2Q9Y487 856 aa9.22□□□□□ -0.93
HDAC3-206ENST00000471968 ZNF646O15015 1829 aaPredicted RBP9.21□□□□□ -0.93
HDAC3-206ENST00000471968 EIF4A2Q14240 407 aaKnown RBP9.21□□□□□ -0.94
HDAC3-206ENST00000471968 ARMC9Q7Z3E5 817 aa9.21□□□□□ -0.94
HDAC3-206ENST00000471968 SLC10A4Q96EP9 437 aa9.2□□□□□ -0.94
HDAC3-206ENST00000471968 ZNF496Q96IT1 587 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-206ENST00000471968 PAWRQ96IZ0 340 aaKnown RBP9.2□□□□□ -0.94
HDAC3-206ENST00000471968 DBNDD1Q9H9R9 158 aa9.2□□□□□ -0.94
HDAC3-206ENST00000471968 LGR6Q9HBX8 967 aa9.2□□□□□ -0.94
HDAC3-206ENST00000471968 BIN2Q9UBW5 565 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-206ENST00000471968 SGPL1O95470 568 aa9.19□□□□□ -0.94
HDAC3-206ENST00000471968 TFRCP02786 760 aaKnown RBP9.19□□□□□ -0.94
HDAC3-206ENST00000471968 ZBTB48P10074 688 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-206ENST00000471968 GRK4P32298 578 aa9.19□□□□□ -0.94
HDAC3-206ENST00000471968 PIP4K2AP48426 406 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-206ENST00000471968 TMEM31Q5JXX7 168 aa9.19□□□□□ -0.94
HDAC3-206ENST00000471968 LDLRAD1Q5T700 205 aa9.19□□□□□ -0.94
HDAC3-206ENST00000471968 TTC5Q8N0Z6 440 aa9.19□□□□□ -0.94
HDAC3-206ENST00000471968 WNK4Q96J92 1243 aa9.19□□□□□ -0.94
HDAC3-206ENST00000471968 ASB2Q96Q27 587 aa9.19□□□□□ -0.94
HDAC3-206ENST00000471968 PTPN18Q99952 460 aa9.19□□□□□ -0.94
HDAC3-206ENST00000471968 KCNQ5Q9NR82 932 aa9.19□□□□□ -0.94
HDAC3-206ENST00000471968 ANGEL1Q9UNK9 670 aaKnown RBP9.19□□□□□ -0.94
HDAC3-206ENST00000471968 RGL2O15211 777 aa9.18□□□□□ -0.94
HDAC3-206ENST00000471968 COL2A1P02458 1487 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-206ENST00000471968 FOXK2Q01167 660 aa9.18□□□□□ -0.94
HDAC3-206ENST00000471968 KIF22Q14807 665 aa9.18□□□□□ -0.94
HDAC3-206ENST00000471968 RTL9Q8NET4 1388 aa9.18□□□□□ -0.94
HDAC3-206ENST00000471968 IL27Q8NEV9 243 aa9.18□□□□□ -0.94
HDAC3-206ENST00000471968 ATXN2LQ8WWM7 1075 aaKnown RBP9.18□□□□□ -0.94
HDAC3-206ENST00000471968 ALPK3Q96L96 1907 aa9.18□□□□□ -0.94
HDAC3-206ENST00000471968 NECAB3Q96P71 396 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-206ENST00000471968 FZD1Q9UP38 647 aa9.18□□□□□ -0.94
HDAC3-206ENST00000471968 CFAP54Q96N23 3096 aa9.17□□□□□ -0.94
HDAC3-206ENST00000471968 PRMT2P55345 433 aa9.17□□□□□ -0.94
HDAC3-206ENST00000471968 UBXN2AP68543 259 aa9.17□□□□□ -0.94
HDAC3-206ENST00000471968 RAET1EQ8TD07 263 aa9.17□□□□□ -0.94
HDAC3-206ENST00000471968 DIS3LQ8TF46 1054 aaKnown RBP9.17□□□□□ -0.94
HDAC3-206ENST00000471968 CLMNQ96JQ2 1002 aa9.17□□□□□ -0.94
HDAC3-206ENST00000471968 TEX13AQ9BXU3 409 aaPredicted RBP9.17□□□□□ -0.94
HDAC3-206ENST00000471968 UNC93B1Q9H1C4 597 aa9.17□□□□□ -0.94
HDAC3-206ENST00000471968 TTYH1Q9H313 450 aaPredicted RBP9.17□□□□□ -0.94
HDAC3-206ENST00000471968 EPHX3Q9H6B9 360 aa9.17□□□□□ -0.94
HDAC3-206ENST00000471968 RIPOR2Q9Y4F9 1068 aa9.17□□□□□ -0.94
HDAC3-206ENST00000471968 ZFHX4Q86UP3 3567 aa9.17□□□□□ -0.94
HDAC3-206ENST00000471968 SSC5DA1L4H1 1573 aa9.16□□□□□ -0.94
HDAC3-206ENST00000471968 XIRP2A4UGR9 3374 aa9.16□□□□□ -0.94
HDAC3-206ENST00000471968 BAHCC1Q9P281 2608 aa9.16□□□□□ -0.94
HDAC3-206ENST00000471968 LACTBP83111 547 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-206ENST00000471968 MDM2Q00987 491 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-206ENST00000471968 TAF1CQ15572 869 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-206ENST00000471968 C3orf67Q6ZVT6 689 aa9.16□□□□□ -0.94
HDAC3-206ENST00000471968 NECAB2Q7Z6G3 386 aa9.16□□□□□ -0.94
HDAC3-206ENST00000471968 AEBP1Q8IUX7 1158 aa9.16□□□□□ -0.94
HDAC3-206ENST00000471968 PUS7Q96PZ0 661 aaKnown RBP9.16□□□□□ -0.94
HDAC3-206ENST00000471968 NYXQ9GZU5 481 aa9.16□□□□□ -0.94
HDAC3-206ENST00000471968 ZFYVE28Q9HCC9 887 aa9.16□□□□□ -0.94
HDAC3-206ENST00000471968 ZSWIM8A7E2V4 1837 aa9.16□□□□□ -0.94
HDAC3-206ENST00000471968 ZDBF2Q9HCK1 2354 aa9.15□□□□□ -0.94
HDAC3-206ENST00000471968 HEG1Q9ULI3 1381 aa9.15□□□□□ -0.94
HDAC3-206ENST00000471968 FAM205AQ6ZU69 1335 aa9.15□□□□□ -0.94
HDAC3-206ENST00000471968 USP34Q70CQ2 3546 aa9.15□□□□□ -0.94
HDAC3-206ENST00000471968 RIMBP2O15034 1052 aa9.15□□□□□ -0.94
HDAC3-206ENST00000471968 RNMTO43148 476 aaKnown RBP9.15□□□□□ -0.94
HDAC3-206ENST00000471968 GNRH1P01148 92 aa9.15□□□□□ -0.94
HDAC3-206ENST00000471968 ZNF280AP59817 542 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-206ENST00000471968 PPM1EQ8WY54 764 aa9.15□□□□□ -0.94
HDAC3-206ENST00000471968 COL26A1Q96A83 441 aa9.15□□□□□ -0.94
HDAC3-206ENST00000471968 TRIM47Q96LD4 638 aa9.15□□□□□ -0.94
HDAC3-206ENST00000471968 MYOZ2Q9NPC6 264 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms