RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 DOK7Q18PE1 504 aa26.96■■□□□ 1.91
CPSF7-209ENST00000463244 TBC1D16Q8TBP0 767 aa26.96■■□□□ 1.91
CPSF7-209ENST00000463244 MCOLN1Q9GZU1 580 aa26.96■■□□□ 1.91
CPSF7-209ENST00000463244 ADAMTS8Q9UP79 889 aa26.95■■□□□ 1.9
CPSF7-209ENST00000463244 MBIPQ9NS73 344 aa26.94■■□□□ 1.9
CPSF7-209ENST00000463244 PODXL2Q9NZ53 605 aa26.94■■□□□ 1.9
CPSF7-209ENST00000463244 MLLT1Q03111 559 aaPredicted RBP26.93■■□□□ 1.9
CPSF7-209ENST00000463244 RBM26Q5T8P6 1007 aaKnown RBP26.93■■□□□ 1.9
CPSF7-209ENST00000463244 ZBTB38Q8NAP3 1195 aaPredicted RBP26.93■■□□□ 1.9
CPSF7-209ENST00000463244 DCPSQ96C86 337 aaKnown RBP26.93■■□□□ 1.9
CPSF7-209ENST00000463244 GBA2Q9HCG7 927 aaPredicted RBP26.93■■□□□ 1.9
CPSF7-209ENST00000463244 ADM5C9JUS6 153 aa26.92■■□□□ 1.9
CPSF7-209ENST00000463244 RGMBQ6NW40 437 aa26.92■■□□□ 1.9
CPSF7-209ENST00000463244 RIC3Q7Z5B4 369 aa26.92■■□□□ 1.9
CPSF7-209ENST00000463244 FAM155AB1AL88 458 aaPredicted RBP26.91■■□□□ 1.9
CPSF7-209ENST00000463244 VIL1P09327 827 aaKnown RBP26.91■■□□□ 1.9
CPSF7-209ENST00000463244 ZNF853P0CG23 659 aa26.91■■□□□ 1.9
CPSF7-209ENST00000463244 DDX10Q13206 875 aaKnown RBP26.91■■□□□ 1.9
CPSF7-209ENST00000463244 C2orf69Q8N8R5 385 aa26.91■■□□□ 1.9
CPSF7-209ENST00000463244 ZC3H12CQ9C0D7 883 aaKnown RBP26.91■■□□□ 1.9
CPSF7-209ENST00000463244 SEC31BQ9NQW1 1179 aa26.91■■□□□ 1.9
CPSF7-209ENST00000463244 GOLGA2Q08379 1002 aa26.9■■□□□ 1.9
CPSF7-209ENST00000463244 KIF4BQ2VIQ3 1234 aa26.9■■□□□ 1.9
CPSF7-209ENST00000463244 TNRC18O15417 2968 aaPredicted RBP26.9■■□□□ 1.9
CPSF7-209ENST00000463244 PSME4Q14997 1843 aa26.89■■□□□ 1.9
CPSF7-209ENST00000463244 HSP90B1P14625 803 aaKnown RBP26.89■■□□□ 1.9
CPSF7-209ENST00000463244 PHAXQ9H814 394 aaKnown RBP26.89■■□□□ 1.9
CPSF7-209ENST00000463244 UFL1O94874 794 aa26.88■■□□□ 1.89
CPSF7-209ENST00000463244 DGKZQ13574 1117 aa26.88■■□□□ 1.89
CPSF7-209ENST00000463244 CCDC102AQ96A19 550 aa26.88■■□□□ 1.89
CPSF7-209ENST00000463244 ANKIB1Q9P2G1 1089 aa26.88■■□□□ 1.89
CPSF7-209ENST00000463244 ZNF609O15014 1411 aa26.88■■□□□ 1.89
CPSF7-209ENST00000463244 MYD88Q99836 296 aa26.87■■□□□ 1.89
CPSF7-209ENST00000463244 GGA3Q9NZ52 723 aa26.87■■□□□ 1.89
CPSF7-209ENST00000463244 GGA1Q9UJY5 639 aa26.87■■□□□ 1.89
CPSF7-209ENST00000463244 AKAP11Q9UKA4 1901 aa26.86■■□□□ 1.89
CPSF7-209ENST00000463244 PCCAP05165 728 aaPredicted RBP26.86■■□□□ 1.89
CPSF7-209ENST00000463244 CCDC152Q4G0S7 254 aa26.86■■□□□ 1.89
CPSF7-209ENST00000463244 SULF1Q8IWU6 871 aa26.86■■□□□ 1.89
CPSF7-209ENST00000463244 CCDC191Q8NCU4 936 aa26.86■■□□□ 1.89
CPSF7-209ENST00000463244 IFT57Q9NWB7 429 aa26.86■■□□□ 1.89
CPSF7-209ENST00000463244 SAGE1Q9NXZ1 904 aa26.86■■□□□ 1.89
CPSF7-209ENST00000463244 ZNF157P51786 506 aaPredicted RBP26.85■■□□□ 1.89
CPSF7-209ENST00000463244 KIF23Q02241 960 aaPredicted RBP26.85■■□□□ 1.89
CPSF7-209ENST00000463244 ASTN2O75129 1339 aaPredicted RBP26.85■■□□□ 1.89
CPSF7-209ENST00000463244 G3V3G9 751 aa26.84■■□□□ 1.89
CPSF7-209ENST00000463244 ZNF280AP59817 542 aaPredicted RBP26.84■■□□□ 1.89
CPSF7-209ENST00000463244 DCAF8Q5TAQ9 597 aa26.84■■□□□ 1.89
CPSF7-209ENST00000463244 AGBL3Q8NEM8 1001 aa26.84■■□□□ 1.89
CPSF7-209ENST00000463244 ELL2O00472 640 aaPredicted RBP26.83■■□□□ 1.89
CPSF7-209ENST00000463244 PDE8AO60658 829 aa26.83■■□□□ 1.89
CPSF7-209ENST00000463244 GNAI1P63096 354 aa26.83■■□□□ 1.89
CPSF7-209ENST00000463244 RSBN1LQ6PCB5 846 aaPredicted RBP26.83■■□□□ 1.89
CPSF7-209ENST00000463244 CWC25Q9NXE8 425 aaPredicted RBP26.83■■□□□ 1.89
CPSF7-209ENST00000463244 PDE4DIPQ5VU43 2346 aa26.83■■□□□ 1.89
CPSF7-209ENST00000463244 SLC34A2O95436 690 aa26.82■■□□□ 1.88
CPSF7-209ENST00000463244 SLC10A3P09131 477 aa26.82■■□□□ 1.88
CPSF7-209ENST00000463244 CDCA5Q96FF9 252 aa26.82■■□□□ 1.88
CPSF7-209ENST00000463244 SCARF1Q14162 830 aa26.81■■□□□ 1.88
CPSF7-209ENST00000463244 JARID2Q92833 1246 aaPredicted RBP26.81■■□□□ 1.88
CPSF7-209ENST00000463244 CCDC85AQ96PX6 553 aaPredicted RBP26.81■■□□□ 1.88
CPSF7-209ENST00000463244 XDHP47989 1333 aa26.81■■□□□ 1.88
CPSF7-209ENST00000463244 APAF1O14727 1248 aa26.8■■□□□ 1.88
CPSF7-209ENST00000463244 CALD1Q05682 793 aaKnown RBP26.8■■□□□ 1.88
CPSF7-209ENST00000463244 ANGEL2Q5VTE6 544 aaKnown RBP26.8■■□□□ 1.88
CPSF7-209ENST00000463244 GMLQ99445 158 aa26.8■■□□□ 1.88
CPSF7-209ENST00000463244 METTL22Q9BUU2 404 aaPredicted RBP26.8■■□□□ 1.88
CPSF7-209ENST00000463244 RNF186Q9NXI6 227 aa26.8■■□□□ 1.88
CPSF7-209ENST00000463244 TRPA1O75762 1119 aa26.79■■□□□ 1.88
CPSF7-209ENST00000463244 ANKRD18AQ8IVF6 992 aa26.79■■□□□ 1.88
CPSF7-209ENST00000463244 C8orf58Q8NAV2 365 aa26.79■■□□□ 1.88
CPSF7-209ENST00000463244 CSRNP1Q96S65 589 aa26.78■■□□□ 1.88
CPSF7-209ENST00000463244 MYH3P11055 1940 aa26.78■■□□□ 1.88
CPSF7-209ENST00000463244 PAPPA2Q9BXP8 1791 aa26.77■■□□□ 1.88
CPSF7-209ENST00000463244 DDX58O95786 925 aaKnown RBP26.77■■□□□ 1.88
CPSF7-209ENST00000463244 USP17L8P0C7I0 530 aa26.77■■□□□ 1.88
CPSF7-209ENST00000463244 PODNQ7Z5L7 613 aa26.77■■□□□ 1.88
CPSF7-209ENST00000463244 PRKRIP1Q9H875 184 aaPredicted RBP26.77■■□□□ 1.88
CPSF7-209ENST00000463244 MYOZ2Q9NPC6 264 aa26.77■■□□□ 1.88
CPSF7-209ENST00000463244 PITPNM2Q9BZ72 1349 aa26.76■■□□□ 1.87
CPSF7-209ENST00000463244 ATP2B4P23634 1241 aa26.76■■□□□ 1.87
CPSF7-209ENST00000463244 USP17L3A6NCW0 530 aa26.75■■□□□ 1.87
CPSF7-209ENST00000463244 USP17L4A6NCW7 530 aa26.75■■□□□ 1.87
CPSF7-209ENST00000463244 FKBP1BP68106 108 aa26.75■■□□□ 1.87
CPSF7-209ENST00000463244 CCDC30Q5VVM6 783 aa26.75■■□□□ 1.87
CPSF7-209ENST00000463244 USP17L1Q7RTZ2 530 aa26.75■■□□□ 1.87
CPSF7-209ENST00000463244 RASAL3Q86YV0 1011 aa26.75■■□□□ 1.87
CPSF7-209ENST00000463244 CHMP4AQ9BY43 222 aa26.75■■□□□ 1.87
CPSF7-209ENST00000463244 MAP3K2Q9Y2U5 619 aa26.75■■□□□ 1.87
CPSF7-209ENST00000463244 SPEF2Q9C093 1822 aa26.74■■□□□ 1.87
CPSF7-209ENST00000463244 CTSWP56202 376 aa26.74■■□□□ 1.87
CPSF7-209ENST00000463244 CDC5LQ99459 802 aaKnown RBP26.74■■□□□ 1.87
CPSF7-209ENST00000463244 MED23Q9ULK4 1368 aa26.73■■□□□ 1.87
CPSF7-209ENST00000463244 REM2Q8IYK8 340 aaPredicted RBP26.73■■□□□ 1.87
CPSF7-209ENST00000463244 ZNF646O15015 1829 aaPredicted RBP26.73■■□□□ 1.87
CPSF7-209ENST00000463244 WTIPA6NIX2 430 aaPredicted RBP26.72■■□□□ 1.87
CPSF7-209ENST00000463244 IGKV5-2P06315 115 aa26.72■■□□□ 1.87
CPSF7-209ENST00000463244 BSDC1Q9NW68 430 aaPredicted RBP26.72■■□□□ 1.87
CPSF7-209ENST00000463244 KSR2Q6VAB6 950 aa26.71■■□□□ 1.87
CPSF7-209ENST00000463244 TSPYL6Q8N831 410 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms