RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 DLC1Q96QB1 1528 aa18.37■□□□□ 0.53
DHFR-201ENST00000439211 AOX1Q06278 1338 aa18.37■□□□□ 0.53
DHFR-201ENST00000439211 KSR2Q6VAB6 950 aa18.37■□□□□ 0.53
DHFR-201ENST00000439211 SMARCE1Q969G3 411 aa18.37■□□□□ 0.53
DHFR-201ENST00000439211 CDC42BPGQ6DT37 1551 aa18.37■□□□□ 0.53
DHFR-201ENST00000439211 KIF2AO00139 706 aaPredicted RBP18.36■□□□□ 0.53
DHFR-201ENST00000439211 GRM8O00222 908 aa18.36■□□□□ 0.53
DHFR-201ENST00000439211 ZNF165P49910 485 aa18.36■□□□□ 0.53
DHFR-201ENST00000439211 PROSER3Q2NL68 480 aa18.36■□□□□ 0.53
DHFR-201ENST00000439211 NDUFB9Q9Y6M9 179 aa18.36■□□□□ 0.53
DHFR-201ENST00000439211 TTC41PQ6P2S7 1318 aa18.36■□□□□ 0.53
DHFR-201ENST00000439211 MAP2K2P36507 400 aa18.36■□□□□ 0.53
DHFR-201ENST00000439211 CLCN6P51797 869 aa18.36■□□□□ 0.53
DHFR-201ENST00000439211 PRAMEF22A3QJZ6 481 aa18.36■□□□□ 0.53
DHFR-201ENST00000439211 ANKRD65E5RJM6 399 aa18.36■□□□□ 0.53
DHFR-201ENST00000439211 ST5P78524 1137 aa18.36■□□□□ 0.53
DHFR-201ENST00000439211 CT47A1Q5JQC4 288 aaPredicted RBP18.36■□□□□ 0.53
DHFR-201ENST00000439211 EDC3Q96F86 508 aaKnown RBP18.36■□□□□ 0.53
DHFR-201ENST00000439211 BICC1Q9H694 974 aaKnown RBP18.36■□□□□ 0.53
DHFR-201ENST00000439211 SETD1BQ9UPS6 1966 aaKnown RBP18.36■□□□□ 0.53
DHFR-201ENST00000439211 ME3Q16798 604 aa18.35■□□□□ 0.53
DHFR-201ENST00000439211 KCNG1Q9UIX4 513 aa18.35■□□□□ 0.53
DHFR-201ENST00000439211 IVLP07476 585 aa18.35■□□□□ 0.53
DHFR-201ENST00000439211 CALRP27797 417 aaKnown RBP18.35■□□□□ 0.53
DHFR-201ENST00000439211 TYRO3Q06418 890 aa18.35■□□□□ 0.53
DHFR-201ENST00000439211 ANKRD1Q15327 319 aa18.35■□□□□ 0.53
DHFR-201ENST00000439211 HSP90B2PQ58FF3 399 aa18.35■□□□□ 0.53
DHFR-201ENST00000439211 VPS53Q5VIR6 699 aa18.35■□□□□ 0.53
DHFR-201ENST00000439211 SSH2Q76I76 1423 aa18.35■□□□□ 0.53
DHFR-201ENST00000439211 MICALL1Q8N3F8 863 aa18.35■□□□□ 0.53
DHFR-201ENST00000439211 CACTINQ8WUQ7 758 aaKnown RBP18.35■□□□□ 0.53
DHFR-201ENST00000439211 DACT1Q9NYF0 836 aa18.35■□□□□ 0.53
DHFR-201ENST00000439211 SF3A1Q15459 793 aaKnown RBP18.34■□□□□ 0.53
DHFR-201ENST00000439211 KCNH5Q8NCM2 988 aa18.34■□□□□ 0.53
DHFR-201ENST00000439211 IP6K1Q92551 441 aa18.34■□□□□ 0.53
DHFR-201ENST00000439211 LCMT1Q9UIC8 334 aa18.34■□□□□ 0.53
DHFR-201ENST00000439211 ATP5J2-PTCD1G3V325 749 aa18.34■□□□□ 0.53
DHFR-201ENST00000439211 PTCD1O75127 700 aaKnown RBP18.34■□□□□ 0.53
DHFR-201ENST00000439211 NOP2P46087 812 aaKnown RBP18.34■□□□□ 0.53
DHFR-201ENST00000439211 AKAP4Q5JQC9 854 aa18.34■□□□□ 0.53
DHFR-201ENST00000439211 HYPKQ9NX55 129 aa18.34■□□□□ 0.53
DHFR-201ENST00000439211 OVOS2A0A0J9YW53 1432 aa18.34■□□□□ 0.53
DHFR-201ENST00000439211 OVOS2Q6IE36 1432 aa18.34■□□□□ 0.53
DHFR-201ENST00000439211 IBSPP21815 317 aaPredicted RBP18.34■□□□□ 0.53
DHFR-201ENST00000439211 FAM212AQ96EL1 285 aa18.33■□□□□ 0.53
DHFR-201ENST00000439211 A0A0G2JS52 829 aa18.33■□□□□ 0.53
DHFR-201ENST00000439211 GOLIM4O00461 696 aa18.33■□□□□ 0.53
DHFR-201ENST00000439211 SMC1AQ14683 1233 aaKnown RBP18.33■□□□□ 0.52
DHFR-201ENST00000439211 AMOTQ4VCS5 1084 aa18.33■□□□□ 0.52
DHFR-201ENST00000439211 GIMAP7Q8NHV1 300 aa18.33■□□□□ 0.52
DHFR-201ENST00000439211 GOLGA5Q8TBA6 731 aa18.33■□□□□ 0.52
DHFR-201ENST00000439211 MTMR6Q9Y217 621 aa18.33■□□□□ 0.52
DHFR-201ENST00000439211 ATP6V1AP38606 617 aa18.32■□□□□ 0.52
DHFR-201ENST00000439211 ANKRD24Q8TF21 1146 aa18.32■□□□□ 0.52
DHFR-201ENST00000439211 EAF2Q96CJ1 260 aaPredicted RBP18.32■□□□□ 0.52
DHFR-201ENST00000439211 SUCLG2Q96I99 432 aa18.32■□□□□ 0.52
DHFR-201ENST00000439211 ANKRD26Q9UPS8 1709 aa18.32■□□□□ 0.52
DHFR-201ENST00000439211 CDC37L1Q7L3B6 337 aa18.32■□□□□ 0.52
DHFR-201ENST00000439211 SEC31AO94979 1220 aaKnown RBP18.32■□□□□ 0.52
DHFR-201ENST00000439211 ZNF75DP51815 510 aa18.32■□□□□ 0.52
DHFR-201ENST00000439211 GUCY1B3Q02153 619 aa18.32■□□□□ 0.52
DHFR-201ENST00000439211 UBE3BQ7Z3V4 1068 aa18.32■□□□□ 0.52
DHFR-201ENST00000439211 SRLQ86TD4 932 aa18.32■□□□□ 0.52
DHFR-201ENST00000439211 LINS1Q8NG48 757 aa18.32■□□□□ 0.52
DHFR-201ENST00000439211 PPM1EQ8WY54 764 aa18.32■□□□□ 0.52
DHFR-201ENST00000439211 POLA2Q14181 598 aa18.31■□□□□ 0.52
DHFR-201ENST00000439211 LARP1Q6PKG0 1096 aaKnown RBP18.31■□□□□ 0.52
DHFR-201ENST00000439211 COPS6Q7L5N1 327 aa18.31■□□□□ 0.52
DHFR-201ENST00000439211 PROSER2Q86WR7 435 aaPredicted RBP18.31■□□□□ 0.52
DHFR-201ENST00000439211 SALL3Q9BXA9 1300 aa18.31■□□□□ 0.52
DHFR-201ENST00000439211 CCDC69A6NI79 296 aa18.31■□□□□ 0.52
DHFR-201ENST00000439211 ALDH1L1O75891 902 aa18.31■□□□□ 0.52
DHFR-201ENST00000439211 PSEN1P49768 467 aa18.31■□□□□ 0.52
DHFR-201ENST00000439211 DDX46Q7L014 1031 aaKnown RBP18.31■□□□□ 0.52
DHFR-201ENST00000439211 SCAND2PQ9GZW5 306 aaPredicted RBP18.31■□□□□ 0.52
DHFR-201ENST00000439211 TPCN1Q9ULQ1 816 aa18.31■□□□□ 0.52
DHFR-201ENST00000439211 H0YHG0 523 aa18.31■□□□□ 0.52
DHFR-201ENST00000439211 XAGE3Q8WTP9 111 aa18.31■□□□□ 0.52
DHFR-201ENST00000439211 ARFGAP3Q9NP61 516 aa18.31■□□□□ 0.52
DHFR-201ENST00000439211 BABAM1Q9NWV8 329 aa18.31■□□□□ 0.52
DHFR-201ENST00000439211 PLEKHG1Q9ULL1 1385 aa18.31■□□□□ 0.52
DHFR-201ENST00000439211 RNMTO43148 476 aaKnown RBP18.3■□□□□ 0.52
DHFR-201ENST00000439211 AP5Z1O43299 807 aa18.3■□□□□ 0.52
DHFR-201ENST00000439211 NEMFO60524 1076 aa18.3■□□□□ 0.52
DHFR-201ENST00000439211 SMC2O95347 1197 aa18.3■□□□□ 0.52
DHFR-201ENST00000439211 DNAJC25Q9H1X3 360 aa18.3■□□□□ 0.52
DHFR-201ENST00000439211 VPS18Q9P253 973 aa18.3■□□□□ 0.52
DHFR-201ENST00000439211 REREQ9P2R6 1566 aa18.3■□□□□ 0.52
DHFR-201ENST00000439211 CCDC73Q6ZRK6 1079 aa18.3■□□□□ 0.52
DHFR-201ENST00000439211 CXorf56Q9H5V9 222 aa18.3■□□□□ 0.52
DHFR-201ENST00000439211 TLR7Q9NYK1 1049 aaKnown RBP18.3■□□□□ 0.52
DHFR-201ENST00000439211 DNAI1Q9UI46 699 aa18.3■□□□□ 0.52
DHFR-201ENST00000439211 USP31Q70CQ4 1352 aa18.3■□□□□ 0.52
DHFR-201ENST00000439211 SLC27A2O14975 620 aa18.3■□□□□ 0.52
DHFR-201ENST00000439211 USP8P40818 1118 aa18.3■□□□□ 0.52
DHFR-201ENST00000439211 MMP14P50281 582 aa18.3■□□□□ 0.52
DHFR-201ENST00000439211 CCT2P78371 535 aaKnown RBP18.3■□□□□ 0.52
DHFR-201ENST00000439211 MCM6Q14566 821 aa18.3■□□□□ 0.52
DHFR-201ENST00000439211 CBX8Q9HC52 389 aa18.3■□□□□ 0.52
DHFR-201ENST00000439211 A0A0D9SFI3 127 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms