RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 METTL24Q5JXM2 366 aa16.61■□□□□ 0.25
PRPF39-202ENST00000424478 RIPOR2Q9Y4F9 1068 aa16.61■□□□□ 0.25
PRPF39-202ENST00000424478 NLGN2Q8NFZ4 835 aa16.61■□□□□ 0.25
PRPF39-202ENST00000424478 EAF2Q96CJ1 260 aaPredicted RBP16.61■□□□□ 0.25
PRPF39-202ENST00000424478 RIC1Q4ADV7 1423 aa16.6■□□□□ 0.25
PRPF39-202ENST00000424478 HSP90B1P14625 803 aaKnown RBP16.6■□□□□ 0.25
PRPF39-202ENST00000424478 PDE6BP35913 854 aa16.6■□□□□ 0.25
PRPF39-202ENST00000424478 NEUROD6Q96NK8 337 aa16.6■□□□□ 0.25
PRPF39-202ENST00000424478 CDC5LQ99459 802 aaKnown RBP16.6■□□□□ 0.25
PRPF39-202ENST00000424478 H0YIN7 160 aa16.59■□□□□ 0.25
PRPF39-202ENST00000424478 AACSQ86V21 672 aa16.59■□□□□ 0.25
PRPF39-202ENST00000424478 CHRNDQ07001 517 aa16.59■□□□□ 0.25
PRPF39-202ENST00000424478 C10orf71Q711Q0 1435 aa16.59■□□□□ 0.25
PRPF39-202ENST00000424478 SPON1Q9HCB6 807 aa16.59■□□□□ 0.25
PRPF39-202ENST00000424478 ADORA1P30542 326 aa16.59■□□□□ 0.25
PRPF39-202ENST00000424478 GRAPQ13588 217 aa16.59■□□□□ 0.25
PRPF39-202ENST00000424478 GRAPLQ8TC17 118 aaPredicted RBP16.59■□□□□ 0.25
PRPF39-202ENST00000424478 KIF1BPQ96EK5 621 aa16.59■□□□□ 0.25
PRPF39-202ENST00000424478 NDUFB9Q9Y6M9 179 aa16.59■□□□□ 0.25
PRPF39-202ENST00000424478 KLRK1P26718 216 aa16.58■□□□□ 0.24
PRPF39-202ENST00000424478 RBM17Q96I25 401 aaKnown RBP16.58■□□□□ 0.24
PRPF39-202ENST00000424478 ZBTB47Q9UFB7 747 aaPredicted RBP16.58■□□□□ 0.24
PRPF39-202ENST00000424478 MINPP1Q9UNW1 487 aa16.58■□□□□ 0.24
PRPF39-202ENST00000424478 KLRG2A4D1S0 409 aaPredicted RBP16.58■□□□□ 0.24
PRPF39-202ENST00000424478 SLX4Q8IY92 1834 aa16.58■□□□□ 0.24
PRPF39-202ENST00000424478 IL15P40933 162 aaPredicted RBP16.57■□□□□ 0.24
PRPF39-202ENST00000424478 KCNA3P22001 575 aa16.57■□□□□ 0.24
PRPF39-202ENST00000424478 DBNDD2Q9BQY9 259 aa16.57■□□□□ 0.24
PRPF39-202ENST00000424478 CEP126Q9P2H0 1117 aa16.57■□□□□ 0.24
PRPF39-202ENST00000424478 RTL9Q8NET4 1388 aa16.57■□□□□ 0.24
PRPF39-202ENST00000424478 MAP4K4O95819 1239 aaPredicted RBP16.57■□□□□ 0.24
PRPF39-202ENST00000424478 NPR1P16066 1061 aa16.57■□□□□ 0.24
PRPF39-202ENST00000424478 PRPF40BQ6NWY9 871 aaKnown RBP16.57■□□□□ 0.24
PRPF39-202ENST00000424478 TNNI3KQ59H18 835 aa16.56■□□□□ 0.24
PRPF39-202ENST00000424478 MASTLQ96GX5 879 aa16.56■□□□□ 0.24
PRPF39-202ENST00000424478 NSFL1CQ9UNZ2 370 aaKnown RBP16.56■□□□□ 0.24
PRPF39-202ENST00000424478 FPGT-TNNI3KV9GXZ4 949 aa16.56■□□□□ 0.24
PRPF39-202ENST00000424478 VGLL2Q8N8G2 317 aa16.56■□□□□ 0.24
PRPF39-202ENST00000424478 BSDC1Q9NW68 430 aaPredicted RBP16.56■□□□□ 0.24
PRPF39-202ENST00000424478 A0A1B0GUL7 405 aa16.55■□□□□ 0.24
PRPF39-202ENST00000424478 PPEF1O14829 653 aaPredicted RBP16.55■□□□□ 0.24
PRPF39-202ENST00000424478 RAB11FIP3O75154 756 aa16.55■□□□□ 0.24
PRPF39-202ENST00000424478 FHDC1Q9C0D6 1143 aaPredicted RBP16.55■□□□□ 0.24
PRPF39-202ENST00000424478 ANKIB1Q9P2G1 1089 aa16.55■□□□□ 0.24
PRPF39-202ENST00000424478 DBNLQ9UJU6 430 aaKnown RBP16.55■□□□□ 0.24
PRPF39-202ENST00000424478 HOXA10P31260 410 aaPredicted RBP16.55■□□□□ 0.24
PRPF39-202ENST00000424478 HSP90AB4PQ58FF6 505 aa16.55■□□□□ 0.24
PRPF39-202ENST00000424478 CLASRPQ8N2M8 674 aaKnown RBP16.55■□□□□ 0.24
PRPF39-202ENST00000424478 IQSEC3Q9UPP2 1182 aaPredicted RBP16.55■□□□□ 0.24
PRPF39-202ENST00000424478 LRP5O75197 1615 aa16.55■□□□□ 0.24
PRPF39-202ENST00000424478 C21orf2O43822 256 aa16.54■□□□□ 0.24
PRPF39-202ENST00000424478 CIAO1O76071 339 aa16.54■□□□□ 0.24
PRPF39-202ENST00000424478 GPSM2P81274 684 aa16.54■□□□□ 0.24
PRPF39-202ENST00000424478 PDE8BO95263 885 aa16.54■□□□□ 0.24
PRPF39-202ENST00000424478 IFIT2P09913 472 aaKnown RBP16.54■□□□□ 0.24
PRPF39-202ENST00000424478 TXNRD3Q86VQ6 643 aa16.54■□□□□ 0.24
PRPF39-202ENST00000424478 PLEKHM2Q8IWE5 1019 aa16.54■□□□□ 0.24
PRPF39-202ENST00000424478 ATP2B3Q16720 1220 aa16.53■□□□□ 0.24
PRPF39-202ENST00000424478 ERC1Q8IUD2 1116 aa16.53■□□□□ 0.24
PRPF39-202ENST00000424478 CRAMP1Q96RY5 1269 aa16.53■□□□□ 0.24
PRPF39-202ENST00000424478 PI16Q6UXB8 463 aa16.52■□□□□ 0.24
PRPF39-202ENST00000424478 EDC3Q96F86 508 aaKnown RBP16.52■□□□□ 0.24
PRPF39-202ENST00000424478 JAG2Q9Y219 1238 aa16.52■□□□□ 0.24
PRPF39-202ENST00000424478 A0A1B0GUL6 1792 aa16.52■□□□□ 0.23
PRPF39-202ENST00000424478 GYG1P46976 350 aa16.52■□□□□ 0.23
PRPF39-202ENST00000424478 MX1P20591 662 aa16.51■□□□□ 0.23
PRPF39-202ENST00000424478 XAGE2Q96GT9 111 aa16.51■□□□□ 0.23
PRPF39-202ENST00000424478 KIAA1551Q9HCM1 1747 aa16.51■□□□□ 0.23
PRPF39-202ENST00000424478 MROH5Q6ZUA9 1318 aa16.51■□□□□ 0.23
PRPF39-202ENST00000424478 ZNF609O15014 1411 aa16.51■□□□□ 0.23
PRPF39-202ENST00000424478 KCNJ4P48050 445 aa16.51■□□□□ 0.23
PRPF39-202ENST00000424478 SNRKQ9NRH2 765 aa16.51■□□□□ 0.23
PRPF39-202ENST00000424478 RIMBP2O15034 1052 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 BCAMP50895 628 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 PDE1AP54750 535 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 BCS1LQ9Y276 419 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 KIF13BQ9NQT8 1826 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 ALDH1B1P30837 517 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 POLLQ9UGP5 575 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 BBOX1O75936 387 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 UFL1O94874 794 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 SCARF1Q14162 830 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 STYK1Q6J9G0 422 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 PELP1Q8IZL8 1130 aaKnown RBP16.5■□□□□ 0.23
PRPF39-202ENST00000424478 BOLA2Q9H3K6 86 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 SALL3Q9BXA9 1300 aa16.5■□□□□ 0.23
PRPF39-202ENST00000424478 C6orf229H3BNL8 230 aa16.49■□□□□ 0.23
PRPF39-202ENST00000424478 PHKA1P46020 1223 aa16.49■□□□□ 0.23
PRPF39-202ENST00000424478 PUM3Q15397 648 aaKnown RBP16.49■□□□□ 0.23
PRPF39-202ENST00000424478 GORABQ5T7V8 394 aa16.49■□□□□ 0.23
PRPF39-202ENST00000424478 TTLL6Q8N841 843 aa16.49■□□□□ 0.23
PRPF39-202ENST00000424478 ATP6V0A2Q9Y487 856 aa16.49■□□□□ 0.23
PRPF39-202ENST00000424478 GSPT1P15170 499 aaKnown RBP16.49■□□□□ 0.23
PRPF39-202ENST00000424478 FGFR2P21802 821 aa16.48■□□□□ 0.23
PRPF39-202ENST00000424478 ZNF804BA4D1E1 1349 aa16.48■□□□□ 0.23
PRPF39-202ENST00000424478 CNKSR1Q969H4 720 aa16.48■□□□□ 0.23
PRPF39-202ENST00000424478 PIM2Q9P1W9 311 aa16.48■□□□□ 0.23
PRPF39-202ENST00000424478 CHGBP05060 677 aa16.47■□□□□ 0.23
PRPF39-202ENST00000424478 SYT17Q9BSW7 474 aa16.47■□□□□ 0.23
PRPF39-202ENST00000424478 PI4K2BQ8TCG2 481 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms