RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 SCRN1Q12765 414 aa18.75■□□□□ 0.59
ATP2A3-206ENST00000397043 LRMPQ12912 555 aa18.75■□□□□ 0.59
ATP2A3-206ENST00000397043 HSP90AB3PQ58FF7 597 aa18.75■□□□□ 0.59
ATP2A3-206ENST00000397043 TTLL7Q6ZT98 887 aa18.75■□□□□ 0.59
ATP2A3-206ENST00000397043 WASHC4Q2M389 1173 aa18.74■□□□□ 0.59
ATP2A3-206ENST00000397043 PGBD1Q96JS3 809 aa18.74■□□□□ 0.59
ATP2A3-206ENST00000397043 NRBP1Q9UHY1 535 aa18.74■□□□□ 0.59
ATP2A3-206ENST00000397043 COL15A1P39059 1388 aa18.74■□□□□ 0.59
ATP2A3-206ENST00000397043 A1BGP04217 495 aa18.74■□□□□ 0.59
ATP2A3-206ENST00000397043 KCNF1Q9H3M0 494 aa18.74■□□□□ 0.59
ATP2A3-206ENST00000397043 PAG1Q9NWQ8 432 aa18.73■□□□□ 0.59
ATP2A3-206ENST00000397043 MED1Q15648 1581 aaPredicted RBP18.73■□□□□ 0.59
ATP2A3-206ENST00000397043 GOLGA6L19H0YKK7 550 aa18.73■□□□□ 0.59
ATP2A3-206ENST00000397043 RFX5P48382 616 aaPredicted RBP18.73■□□□□ 0.59
ATP2A3-206ENST00000397043 DCAF5Q96JK2 942 aa18.73■□□□□ 0.59
ATP2A3-206ENST00000397043 DDX19AQ9NUU7 478 aaKnown RBP18.73■□□□□ 0.59
ATP2A3-206ENST00000397043 KDM3BQ7LBC6 1761 aa18.73■□□□□ 0.59
ATP2A3-206ENST00000397043 STOX1Q6ZVD7 989 aa18.73■□□□□ 0.59
ATP2A3-206ENST00000397043 ZNF609O15014 1411 aa18.72■□□□□ 0.59
ATP2A3-206ENST00000397043 IFIT1P09914 478 aaKnown RBP18.72■□□□□ 0.59
ATP2A3-206ENST00000397043 ME1P48163 572 aa18.72■□□□□ 0.59
ATP2A3-206ENST00000397043 LRRC24Q50LG9 513 aa18.72■□□□□ 0.59
ATP2A3-206ENST00000397043 TTLL5Q6EMB2 1281 aa18.72■□□□□ 0.59
ATP2A3-206ENST00000397043 KBTBD3Q8NAB2 608 aa18.72■□□□□ 0.59
ATP2A3-206ENST00000397043 MYRIPQ8NFW9 859 aa18.72■□□□□ 0.59
ATP2A3-206ENST00000397043 C16orf45Q96MC5 204 aaPredicted RBP18.72■□□□□ 0.59
ATP2A3-206ENST00000397043 HAUS7Q99871 368 aa18.72■□□□□ 0.59
ATP2A3-206ENST00000397043 PTPDC1A2A3K4 754 aa18.71■□□□□ 0.59
ATP2A3-206ENST00000397043 HMGN5P82970 282 aaKnown RBP18.71■□□□□ 0.59
ATP2A3-206ENST00000397043 CFAP45Q9UL16 551 aa18.71■□□□□ 0.59
ATP2A3-206ENST00000397043 KDM6AO15550 1401 aaPredicted RBP18.71■□□□□ 0.59
ATP2A3-206ENST00000397043 KIF3AQ9Y496 699 aa18.71■□□□□ 0.59
ATP2A3-206ENST00000397043 BECN2A8MW95 431 aa18.71■□□□□ 0.58
ATP2A3-206ENST00000397043 TAF7LQ5H9L4 462 aa18.71■□□□□ 0.58
ATP2A3-206ENST00000397043 ZNF592Q92610 1267 aa18.71■□□□□ 0.58
ATP2A3-206ENST00000397043 C19orf44Q9H6X5 657 aa18.71■□□□□ 0.58
ATP2A3-206ENST00000397043 ELP1O95163 1332 aa18.7■□□□□ 0.58
ATP2A3-206ENST00000397043 OTUD7BQ6GQQ9 843 aa18.7■□□□□ 0.58
ATP2A3-206ENST00000397043 CLSTN2Q9H4D0 955 aa18.7■□□□□ 0.58
ATP2A3-206ENST00000397043 PRDM10Q9NQV6 1147 aa18.7■□□□□ 0.58
ATP2A3-206ENST00000397043 CCDC73Q6ZRK6 1079 aa18.7■□□□□ 0.58
ATP2A3-206ENST00000397043 DHX32Q7L7V1 743 aaKnown RBP18.7■□□□□ 0.58
ATP2A3-206ENST00000397043 CCAR1Q8IX12 1150 aaKnown RBP18.7■□□□□ 0.58
ATP2A3-206ENST00000397043 PLBD2Q8NHP8 589 aa18.7■□□□□ 0.58
ATP2A3-206ENST00000397043 KIAA1524Q8TCG1 905 aa18.7■□□□□ 0.58
ATP2A3-206ENST00000397043 MAP7D2Q96T17 732 aa18.7■□□□□ 0.58
ATP2A3-206ENST00000397043 PUS3Q9BZE2 481 aaKnown RBP18.7■□□□□ 0.58
ATP2A3-206ENST00000397043 GPHNQ9NQX3 736 aaPredicted RBP18.69■□□□□ 0.58
ATP2A3-206ENST00000397043 CWC25Q9NXE8 425 aaPredicted RBP18.69■□□□□ 0.58
ATP2A3-206ENST00000397043 TOM1L2Q6ZVM7 507 aa18.69■□□□□ 0.58
ATP2A3-206ENST00000397043 RESTQ13127 1097 aa18.69■□□□□ 0.58
ATP2A3-206ENST00000397043 SF3A1Q15459 793 aaKnown RBP18.69■□□□□ 0.58
ATP2A3-206ENST00000397043 CLIP2Q9UDT6 1046 aa18.69■□□□□ 0.58
ATP2A3-206ENST00000397043 PDIA4P13667 645 aaKnown RBP18.68■□□□□ 0.58
ATP2A3-206ENST00000397043 PRIMPOLQ96LW4 560 aa18.68■□□□□ 0.58
ATP2A3-206ENST00000397043 A0A1B0GUL7 405 aa18.68■□□□□ 0.58
ATP2A3-206ENST00000397043 KINO60870 393 aaKnown RBP18.68■□□□□ 0.58
ATP2A3-206ENST00000397043 POLR3DP05423 398 aaPredicted RBP18.68■□□□□ 0.58
ATP2A3-206ENST00000397043 USPL1Q5W0Q7 1092 aa18.68■□□□□ 0.58
ATP2A3-206ENST00000397043 FILIP1Q7Z7B0 1213 aa18.68■□□□□ 0.58
ATP2A3-206ENST00000397043 NBPF26B4DH59 902 aa18.67■□□□□ 0.58
ATP2A3-206ENST00000397043 NBPF14Q5TI25 921 aa18.67■□□□□ 0.58
ATP2A3-206ENST00000397043 NBPF10Q6P3W6 841 aaKnown RBP18.67■□□□□ 0.58
ATP2A3-206ENST00000397043 NBPF15Q8N660 670 aa18.67■□□□□ 0.58
ATP2A3-206ENST00000397043 ZRSR1Q15695 479 aaKnown RBP18.67■□□□□ 0.58
ATP2A3-206ENST00000397043 USP28Q96RU2 1077 aa18.67■□□□□ 0.58
ATP2A3-206ENST00000397043 SDF4Q9BRK5 362 aa18.67■□□□□ 0.58
ATP2A3-206ENST00000397043 N4BP2Q86UW6 1770 aaPredicted RBP18.67■□□□□ 0.58
ATP2A3-206ENST00000397043 MEGF6O75095 1541 aa18.67■□□□□ 0.58
ATP2A3-206ENST00000397043 HSPD1P10809 573 aaKnown RBP18.67■□□□□ 0.58
ATP2A3-206ENST00000397043 NSUN7Q8NE18 718 aaKnown RBP18.67■□□□□ 0.58
ATP2A3-206ENST00000397043 ZSCAN16Q9H4T2 348 aaPredicted RBP18.67■□□□□ 0.58
ATP2A3-206ENST00000397043 CEP126Q9P2H0 1117 aa18.67■□□□□ 0.58
ATP2A3-206ENST00000397043 LMO7Q8WWI1 1683 aa18.66■□□□□ 0.58
ATP2A3-206ENST00000397043 E7EWF7 191 aa18.66■□□□□ 0.58
ATP2A3-206ENST00000397043 TPM3P06753 285 aa18.66■□□□□ 0.58
ATP2A3-206ENST00000397043 TSGA10IPQ3SY00 556 aa18.66■□□□□ 0.58
ATP2A3-206ENST00000397043 STRN4Q9NRL3 753 aa18.66■□□□□ 0.58
ATP2A3-206ENST00000397043 RIOK3O14730 519 aaKnown RBP18.66■□□□□ 0.58
ATP2A3-206ENST00000397043 RABL6Q3YEC7 729 aaPredicted RBP18.66■□□□□ 0.58
ATP2A3-206ENST00000397043 CCDC57Q2TAC2 916 aa18.65■□□□□ 0.58
ATP2A3-206ENST00000397043 TTC39AQ5SRH9 613 aa18.65■□□□□ 0.58
ATP2A3-206ENST00000397043 FSIP1Q8NA03 581 aa18.65■□□□□ 0.58
ATP2A3-206ENST00000397043 HMGB1P09429 215 aaKnown RBP18.65■□□□□ 0.58
ATP2A3-206ENST00000397043 ZNF75DP51815 510 aa18.65■□□□□ 0.58
ATP2A3-206ENST00000397043 LRP10Q7Z4F1 713 aa18.65■□□□□ 0.58
ATP2A3-206ENST00000397043 PRDM11Q9NQV5 511 aa18.65■□□□□ 0.58
ATP2A3-206ENST00000397043 FOXO4P98177 505 aa18.65■□□□□ 0.58
ATP2A3-206ENST00000397043 ATG9AQ7Z3C6 839 aa18.65■□□□□ 0.58
ATP2A3-206ENST00000397043 A0A0G2JS52 829 aa18.64■□□□□ 0.57
ATP2A3-206ENST00000397043 IL15P40933 162 aaPredicted RBP18.64■□□□□ 0.57
ATP2A3-206ENST00000397043 TPD52L1Q16890 204 aaPredicted RBP18.64■□□□□ 0.57
ATP2A3-206ENST00000397043 C11orf57Q6ZUT1 292 aaPredicted RBP18.64■□□□□ 0.57
ATP2A3-206ENST00000397043 CPLX1O14810 134 aa18.64■□□□□ 0.57
ATP2A3-206ENST00000397043 GJB4Q9NTQ9 266 aa18.64■□□□□ 0.57
ATP2A3-206ENST00000397043 MAST3O60307 1309 aa18.63■□□□□ 0.57
ATP2A3-206ENST00000397043 PFKFB2O60825 505 aa18.63■□□□□ 0.57
ATP2A3-206ENST00000397043 CTDNEP1O95476 244 aa18.63■□□□□ 0.57
ATP2A3-206ENST00000397043 PI16Q6UXB8 463 aa18.63■□□□□ 0.57
ATP2A3-206ENST00000397043 SPTLC3Q9NUV7 552 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms