RNA–Protein interactions for RNA: ENST00000395432.6

PCDH15-208, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 6,901 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-208	ENST00000395432	RMI1	Q9H9A7	625 aa		4.38	□□□□□ -1.71
PCDH15-208	ENST00000395432	SEPT11	Q9NVA2	429 aa	Known RBP	4.38	□□□□□ -1.71
PCDH15-208	ENST00000395432	LAMB2	P55268	1798 aa		4.38	□□□□□ -1.71
PCDH15-208	ENST00000395432	KDM3B	Q7LBC6	1761 aa		4.38	□□□□□ -1.71
PCDH15-208	ENST00000395432	RNASEL	Q05823	741 aa	Known RBP	4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	TRIML1	Q8N9V2	468 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	PLVAP	Q9BX97	442 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	SAP30BP	Q9UHR5	308 aa	Known RBP	4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	DDAH1	O94760	285 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	TDO2	P48775	406 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	DHX8	Q14562	1220 aa	Known RBP	4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	EAPP	Q56P03	285 aa	Predicted RBP	4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	MPP4	Q96JB8	637 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	PRR12	Q9ULL5	1215 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	NPHP4	O75161	1426 aa	Predicted RBP	4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	MCC	P23508	829 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	P3H1	Q32P28	736 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	DSTYK	Q6XUX3	929 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	FERMT3	Q86UX7	667 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	TEX11	Q8IYF3	940 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	MICALL1	Q8N3F8	863 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	PPM1N	Q8N819	430 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	SREK1	Q8WXA9	508 aa	Known RBP	4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	CBX8	Q9HC52	389 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	PRDM5	Q9NQX1	630 aa	Predicted RBP	4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	RBBP6	Q7Z6E9	1792 aa	Known RBP	4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	THAP12	O43422	761 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	MBD3	O95983	291 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	UVSSA	Q2YD98	709 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	NSD2	O96028	1365 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	GADD45B	O75293	160 aa	Predicted RBP	4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	EFR3A	Q14156	821 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	DRC7	Q8IY82	874 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	ADAM33	Q9BZ11	813 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	LRRC27	Q9C0I9	530 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	TMOD2	Q9NZR1	351 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	PUF60	Q9UHX1	559 aa	Known RBP	4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	HDAC5	Q9UQL6	1122 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	SYCE3	A1L190	88 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	IMMT	Q16891	758 aa	Known RBP	4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	CFAP53	Q96M91	514 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	ZNF232	Q9UNY5	417 aa		4.37	□□□□□ -1.71
PCDH15-208	ENST00000395432	DDX60	Q8IY21	1712 aa	Known RBP	4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	KANK1	Q14678	1352 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	CCDC70	Q6NSX1	233 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	PPP1R14C	Q8TAE6	165 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	GOLGA6B	A6NDN3	693 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	TRIM6-TRIM34	B2RNG4	842 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	NBPF26	B4DH59	902 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	STMND1	H3BQB6	276 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	ATXN8OS	P0DMR3	200 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	NEUROD1	Q13562	356 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	TAF12	Q16514	161 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	RGS22	Q8NE09	1264 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	ABT1	Q9ULW3	272 aa	Known RBP	4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	ZNF131	P52739	623 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	SEPT14	Q6ZU15	432 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	RILPL2	Q969X0	211 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	ANKRD33B	A6NCL7	494 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	CAMKK1	Q8N5S9	505 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	JARID2	Q92833	1246 aa	Predicted RBP	4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	RABL2B	Q9UNT1	228 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	MRPL42	Q9Y6G3	142 aa	Known RBP	4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	CHMP2A	O43633	222 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	GBP2	P32456	591 aa	Predicted RBP	4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	FAM184A	Q8NB25	1140 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	FEZ1	Q99689	392 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	CDC6	Q99741	560 aa		4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	TFIP11	Q9UBB9	837 aa	Known RBP	4.36	□□□□□ -1.71
PCDH15-208	ENST00000395432	GTPBP6	O43824	516 aa	Predicted RBP	4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	HCLS1	P14317	486 aa	Predicted RBP	4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	HMGB2	P26583	209 aa	Known RBP	4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	NKX2-3	Q8TAU0	364 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	TRIM66	O15016	1216 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	TPM2	P07951	284 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	CRBN	Q96SW2	442 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	BTG4	Q9NY30	223 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	LONRF3	Q496Y0	759 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	ZNF280D	Q6N043	979 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	USP33	Q8TEY7	942 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	GOLGA6A	Q9NYA3	693 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	ARHGAP26	Q9UNA1	814 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432		F5H423	210 aa	Predicted RBP	4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	NEUROD6	Q96NK8	337 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	NEK1	Q96PY6	1258 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	TMEM2	Q9UHN6	1383 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	ZNF609	O15014	1411 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	hCG_1642624	A0A1W2PR95	340 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	CCDC175	P0C221	793 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	ATIC	P31939	592 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	ZNF157	P51786	506 aa	Predicted RBP	4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	KRT28	Q7Z3Y7	464 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	MAML1	Q92585	1016 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	CHAMP1	Q96JM3	812 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	TNIP3	Q96KP6	325 aa		4.35	□□□□□ -1.71
PCDH15-208	ENST00000395432	KRT84	Q9NSB2	600 aa		4.35	□□□□□ -1.71

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