RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 DOK7Q18PE1 504 aa23.45■■□□□ 1.34
PDLIM7-205ENST00000393551 BCL2L13Q9BXK5 485 aa23.45■■□□□ 1.34
PDLIM7-205ENST00000393551 SPINK5Q9NQ38 1064 aaPredicted RBP23.45■■□□□ 1.34
PDLIM7-205ENST00000393551 CNOT7Q9UIV1 285 aaKnown RBP23.45■■□□□ 1.34
PDLIM7-205ENST00000393551 NEURL1BA8MQ27 555 aa23.44■■□□□ 1.34
PDLIM7-205ENST00000393551 ECE2O60344 883 aa23.43■■□□□ 1.34
PDLIM7-205ENST00000393551 VAMP4O75379 141 aa23.43■■□□□ 1.34
PDLIM7-205ENST00000393551 DEFB115Q30KQ5 88 aa23.43■■□□□ 1.34
PDLIM7-205ENST00000393551 WDR63Q8IWG1 891 aa23.43■■□□□ 1.34
PDLIM7-205ENST00000393551 TTLL11Q8NHH1 800 aa23.43■■□□□ 1.34
PDLIM7-205ENST00000393551 SPEF2Q9C093 1822 aa23.43■■□□□ 1.34
PDLIM7-205ENST00000393551 CTSWP56202 376 aa23.42■■□□□ 1.34
PDLIM7-205ENST00000393551 MICALL2Q8IY33 904 aa23.42■■□□□ 1.34
PDLIM7-205ENST00000393551 POLR2AP24928 1970 aaKnown RBP23.41■■□□□ 1.34
PDLIM7-205ENST00000393551 WTIPA6NIX2 430 aaPredicted RBP23.41■■□□□ 1.34
PDLIM7-205ENST00000393551 H7C1W4 665 aa23.41■■□□□ 1.34
PDLIM7-205ENST00000393551 UFL1O94874 794 aa23.41■■□□□ 1.34
PDLIM7-205ENST00000393551 EGFRP00533 1210 aa23.41■■□□□ 1.34
PDLIM7-205ENST00000393551 EXOSC9Q06265 439 aaKnown RBP23.41■■□□□ 1.34
PDLIM7-205ENST00000393551 FLIIQ13045 1269 aa23.41■■□□□ 1.34
PDLIM7-205ENST00000393551 DPF2Q92785 391 aa23.41■■□□□ 1.34
PDLIM7-205ENST00000393551 EYA3Q99504 573 aa23.41■■□□□ 1.34
PDLIM7-205ENST00000393551 GLIS2Q9BZE0 524 aaPredicted RBP23.41■■□□□ 1.34
PDLIM7-205ENST00000393551 ABT1Q9ULW3 272 aaKnown RBP23.41■■□□□ 1.34
PDLIM7-205ENST00000393551 FOXN1O15353 648 aa23.4■■□□□ 1.34
PDLIM7-205ENST00000393551 NEXNQ0ZGT2 675 aa23.4■■□□□ 1.34
PDLIM7-205ENST00000393551 SAMD7Q7Z3H4 446 aa23.4■■□□□ 1.34
PDLIM7-205ENST00000393551 GREM2Q9H772 168 aa23.4■■□□□ 1.34
PDLIM7-205ENST00000393551 ANKIB1Q9P2G1 1089 aa23.4■■□□□ 1.34
PDLIM7-205ENST00000393551 PSME4Q14997 1843 aa23.39■■□□□ 1.33
PDLIM7-205ENST00000393551 CASP7P55210 303 aa23.39■■□□□ 1.33
PDLIM7-205ENST00000393551 ANKRD18AQ8IVF6 992 aa23.39■■□□□ 1.33
PDLIM7-205ENST00000393551 ZC3H15Q8WU90 426 aaKnown RBP23.39■■□□□ 1.33
PDLIM7-205ENST00000393551 GGA1Q9UJY5 639 aa23.39■■□□□ 1.33
PDLIM7-205ENST00000393551 WDR33Q9C0J8 1336 aaKnown RBP23.38■■□□□ 1.33
PDLIM7-205ENST00000393551 H7C1D1 291 aa23.38■■□□□ 1.33
PDLIM7-205ENST00000393551 GCKRQ14397 625 aa23.38■■□□□ 1.33
PDLIM7-205ENST00000393551 UBE3BQ7Z3V4 1068 aa23.38■■□□□ 1.33
PDLIM7-205ENST00000393551 ZC3H12CQ9C0D7 883 aaKnown RBP23.38■■□□□ 1.33
PDLIM7-205ENST00000393551 WBP1LQ9NX94 342 aa23.38■■□□□ 1.33
PDLIM7-205ENST00000393551 VIL1P09327 827 aaKnown RBP23.37■■□□□ 1.33
PDLIM7-205ENST00000393551 DLK2Q6UY11 383 aa23.37■■□□□ 1.33
PDLIM7-205ENST00000393551 FAM9BQ8IZU0 186 aa23.37■■□□□ 1.33
PDLIM7-205ENST00000393551 TLL2Q9Y6L7 1015 aa23.37■■□□□ 1.33
PDLIM7-205ENST00000393551 THSD7BQ9C0I4 1608 aa23.37■■□□□ 1.33
PDLIM7-205ENST00000393551 XDHP47989 1333 aa23.36■■□□□ 1.33
PDLIM7-205ENST00000393551 FKBP5Q13451 457 aaPredicted RBP23.36■■□□□ 1.33
PDLIM7-205ENST00000393551 DNAAF4Q8WXU2 420 aa23.36■■□□□ 1.33
PDLIM7-205ENST00000393551 CELF2O95319 508 aaKnown RBP23.35■■□□□ 1.33
PDLIM7-205ENST00000393551 RPS12P25398 132 aaKnown RBP23.35■■□□□ 1.33
PDLIM7-205ENST00000393551 TBC1D10BQ4KMP7 808 aaPredicted RBP23.35■■□□□ 1.33
PDLIM7-205ENST00000393551 TNS4Q8IZW8 715 aa23.35■■□□□ 1.33
PDLIM7-205ENST00000393551 CDC5LQ99459 802 aaKnown RBP23.35■■□□□ 1.33
PDLIM7-205ENST00000393551 PLA2G12BQ9BX93 195 aa23.35■■□□□ 1.33
PDLIM7-205ENST00000393551 BSDC1Q9NW68 430 aaPredicted RBP23.35■■□□□ 1.33
PDLIM7-205ENST00000393551 MINPP1Q9UNW1 487 aa23.35■■□□□ 1.33
PDLIM7-205ENST00000393551 CYP4F22Q6NT55 531 aa23.34■■□□□ 1.33
PDLIM7-205ENST00000393551 CDC37L1Q7L3B6 337 aa23.34■■□□□ 1.33
PDLIM7-205ENST00000393551 CAPNS2Q96L46 248 aa23.34■■□□□ 1.33
PDLIM7-205ENST00000393551 ZNF646O15015 1829 aaPredicted RBP23.33■■□□□ 1.33
PDLIM7-205ENST00000393551 SAPCD2Q86UD0 394 aa23.33■■□□□ 1.33
PDLIM7-205ENST00000393551 USP48Q86UV5 1035 aa23.33■■□□□ 1.33
PDLIM7-205ENST00000393551 LINS1Q8NG48 757 aa23.33■■□□□ 1.33
PDLIM7-205ENST00000393551 F6X3S4 739 aa23.32■■□□□ 1.32
PDLIM7-205ENST00000393551 CSF1RP07333 972 aa23.32■■□□□ 1.32
PDLIM7-205ENST00000393551 ATP2B4P23634 1241 aa23.32■■□□□ 1.32
PDLIM7-205ENST00000393551 RBM26Q5T8P6 1007 aaKnown RBP23.32■■□□□ 1.32
PDLIM7-205ENST00000393551 ZNF609O15014 1411 aa23.31■■□□□ 1.32
PDLIM7-205ENST00000393551 ITGA6P23229 1130 aa23.3■■□□□ 1.32
PDLIM7-205ENST00000393551 FAM161AQ3B820 660 aa23.3■■□□□ 1.32
PDLIM7-205ENST00000393551 GMLQ99445 158 aa23.3■■□□□ 1.32
PDLIM7-205ENST00000393551 ASTN2O75129 1339 aaPredicted RBP23.3■■□□□ 1.32
PDLIM7-205ENST00000393551 ZNF521Q96K83 1311 aa23.3■■□□□ 1.32
PDLIM7-205ENST00000393551 MED23Q9ULK4 1368 aa23.29■■□□□ 1.32
PDLIM7-205ENST00000393551 G3V3G9 751 aa23.29■■□□□ 1.32
PDLIM7-205ENST00000393551 CTCFP49711 727 aaPredicted RBP23.29■■□□□ 1.32
PDLIM7-205ENST00000393551 CCT4P50991 539 aaKnown RBP23.29■■□□□ 1.32
PDLIM7-205ENST00000393551 BEND3Q5T5X7 828 aa23.29■■□□□ 1.32
PDLIM7-205ENST00000393551 DCAF8Q5TAQ9 597 aa23.29■■□□□ 1.32
PDLIM7-205ENST00000393551 RSBN1LQ6PCB5 846 aaPredicted RBP23.29■■□□□ 1.32
PDLIM7-205ENST00000393551 PAXIP1Q6ZW49 1069 aaPredicted RBP23.29■■□□□ 1.32
PDLIM7-205ENST00000393551 TXNRD3Q86VQ6 643 aa23.29■■□□□ 1.32
PDLIM7-205ENST00000393551 MYH16Q9H6N6 1097 aa23.29■■□□□ 1.32
PDLIM7-205ENST00000393551 ZNF408Q9H9D4 720 aa23.29■■□□□ 1.32
PDLIM7-205ENST00000393551 AOC2O75106 756 aa23.28■■□□□ 1.32
PDLIM7-205ENST00000393551 ZNF280AP59817 542 aaPredicted RBP23.28■■□□□ 1.32
PDLIM7-205ENST00000393551 GRM1Q13255 1194 aa23.28■■□□□ 1.32
PDLIM7-205ENST00000393551 PODNQ7Z5L7 613 aa23.28■■□□□ 1.32
PDLIM7-205ENST00000393551 AIDAQ96BJ3 306 aa23.28■■□□□ 1.32
PDLIM7-205ENST00000393551 PRDM10Q9NQV6 1147 aa23.28■■□□□ 1.32
PDLIM7-205ENST00000393551 ADM5C9JUS6 153 aa23.27■■□□□ 1.32
PDLIM7-205ENST00000393551 ECE1P42892 770 aa23.27■■□□□ 1.32
PDLIM7-205ENST00000393551 LBX1P52954 281 aa23.27■■□□□ 1.32
PDLIM7-205ENST00000393551 FOXO4P98177 505 aa23.27■■□□□ 1.32
PDLIM7-205ENST00000393551 MAP2K1Q02750 393 aaPredicted RBP23.27■■□□□ 1.32
PDLIM7-205ENST00000393551 KIF4BQ2VIQ3 1234 aa23.27■■□□□ 1.32
PDLIM7-205ENST00000393551 KRT26Q7Z3Y9 468 aa23.27■■□□□ 1.32
PDLIM7-205ENST00000393551 AGBL3Q8NEM8 1001 aa23.27■■□□□ 1.32
PDLIM7-205ENST00000393551 HSPA8P11142 646 aaKnown RBP23.26■■□□□ 1.31
PDLIM7-205ENST00000393551 KLRK1P26718 216 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms