RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ANO6Q4KMQ2 910 aa17.19■□□□□ 0.34
MSH5-201ENST00000375703 BICD2Q8TD16 824 aa17.19■□□□□ 0.34
MSH5-201ENST00000375703 PGBD1Q96JS3 809 aa17.19■□□□□ 0.34
MSH5-201ENST00000375703 LRRC2Q9BYS8 371 aa17.19■□□□□ 0.34
MSH5-201ENST00000375703 CLSTN2Q9H4D0 955 aa17.19■□□□□ 0.34
MSH5-201ENST00000375703 ZSCAN16Q9H4T2 348 aaPredicted RBP17.19■□□□□ 0.34
MSH5-201ENST00000375703 MEGF6O75095 1541 aa17.18■□□□□ 0.34
MSH5-201ENST00000375703 SCN11AQ9UI33 1791 aa17.18■□□□□ 0.34
MSH5-201ENST00000375703 RESTQ13127 1097 aa17.18■□□□□ 0.34
MSH5-201ENST00000375703 KIAA1524Q8TCG1 905 aa17.18■□□□□ 0.34
MSH5-201ENST00000375703 KCNF1Q9H3M0 494 aa17.18■□□□□ 0.34
MSH5-201ENST00000375703 ZNF142P52746 1687 aaPredicted RBP17.18■□□□□ 0.34
MSH5-201ENST00000375703 NR1I2O75469 434 aa17.18■□□□□ 0.34
MSH5-201ENST00000375703 MTERF4Q7Z6M4 381 aaKnown RBP17.18■□□□□ 0.34
MSH5-201ENST00000375703 DDX17Q92841 729 aaKnown RBP17.18■□□□□ 0.34
MSH5-201ENST00000375703 HMGB1P09429 215 aaKnown RBP17.17■□□□□ 0.34
MSH5-201ENST00000375703 SCRN1Q12765 414 aa17.17■□□□□ 0.34
MSH5-201ENST00000375703 CABLES1Q8TDN4 633 aa17.17■□□□□ 0.34
MSH5-201ENST00000375703 CBX8Q9HC52 389 aa17.17■□□□□ 0.34
MSH5-201ENST00000375703 CFAP45Q9UL16 551 aa17.17■□□□□ 0.34
MSH5-201ENST00000375703 MST1RQ04912 1400 aa17.17■□□□□ 0.34
MSH5-201ENST00000375703 FOXO4P98177 505 aa17.17■□□□□ 0.34
MSH5-201ENST00000375703 CHRNA2Q15822 529 aa17.17■□□□□ 0.34
MSH5-201ENST00000375703 RBM43Q6ZSC3 357 aaKnown RBP17.17■□□□□ 0.34
MSH5-201ENST00000375703 GOLIM4O00461 696 aa17.16■□□□□ 0.34
MSH5-201ENST00000375703 DHX32Q7L7V1 743 aaKnown RBP17.16■□□□□ 0.34
MSH5-201ENST00000375703 PYCARDQ9ULZ3 195 aa17.16■□□□□ 0.34
MSH5-201ENST00000375703 H7C1W4 665 aa17.16■□□□□ 0.34
MSH5-201ENST00000375703 TIMM10P62072 90 aa17.16■□□□□ 0.34
MSH5-201ENST00000375703 STOX1Q6ZVD7 989 aa17.16■□□□□ 0.34
MSH5-201ENST00000375703 LLPHQ9BRT6 129 aaKnown RBP17.16■□□□□ 0.34
MSH5-201ENST00000375703 HELLSQ9NRZ9 838 aa17.16■□□□□ 0.34
MSH5-201ENST00000375703 PAG1Q9NWQ8 432 aa17.16■□□□□ 0.34
MSH5-201ENST00000375703 SH3TC1Q8TE82 1336 aa17.15■□□□□ 0.34
MSH5-201ENST00000375703 PFKFB2O60825 505 aa17.15■□□□□ 0.34
MSH5-201ENST00000375703 SMARCC2Q8TAQ2 1214 aa17.15■□□□□ 0.34
MSH5-201ENST00000375703 ATF3P18847 181 aa17.15■□□□□ 0.34
MSH5-201ENST00000375703 SLFNL1Q499Z3 407 aa17.15■□□□□ 0.34
MSH5-201ENST00000375703 ATG9AQ7Z3C6 839 aa17.15■□□□□ 0.34
MSH5-201ENST00000375703 CEBPZQ03701 1054 aaKnown RBP17.14■□□□□ 0.33
MSH5-201ENST00000375703 DSCC1Q9BVC3 393 aa17.14■□□□□ 0.33
MSH5-201ENST00000375703 APOBRQ0VD83 1088 aa17.13■□□□□ 0.33
MSH5-201ENST00000375703 DRC7Q8IY82 874 aa17.13■□□□□ 0.33
MSH5-201ENST00000375703 NBPF26B4DH59 902 aa17.13■□□□□ 0.33
MSH5-201ENST00000375703 PTGS1P23219 599 aa17.13■□□□□ 0.33
MSH5-201ENST00000375703 ZNF165P49910 485 aa17.13■□□□□ 0.33
MSH5-201ENST00000375703 NBPF14Q5TI25 921 aa17.13■□□□□ 0.33
MSH5-201ENST00000375703 NBPF10Q6P3W6 841 aaKnown RBP17.13■□□□□ 0.33
MSH5-201ENST00000375703 NBPF15Q8N660 670 aa17.13■□□□□ 0.33
MSH5-201ENST00000375703 NSUN7Q8NE18 718 aaKnown RBP17.13■□□□□ 0.33
MSH5-201ENST00000375703 TRIM5Q9C035 493 aa17.13■□□□□ 0.33
MSH5-201ENST00000375703 GPR108Q9NPR9 543 aa17.13■□□□□ 0.33
MSH5-201ENST00000375703 CWC25Q9NXE8 425 aaPredicted RBP17.13■□□□□ 0.33
MSH5-201ENST00000375703 IL15P40933 162 aaPredicted RBP17.12■□□□□ 0.33
MSH5-201ENST00000375703 PALLDQ8WX93 1383 aa17.12■□□□□ 0.33
MSH5-201ENST00000375703 KIF1AQ12756 1690 aa17.12■□□□□ 0.33
MSH5-201ENST00000375703 GTF2F1P35269 517 aaKnown RBP eCLIP17.12■□□□□ 0.337e-15■■■■□ 25.6
MSH5-201ENST00000375703 FOSBP53539 338 aa17.12■□□□□ 0.33
MSH5-201ENST00000375703 EXOSC10Q01780 885 aaKnown RBP17.12■□□□□ 0.33
MSH5-201ENST00000375703 ZMYM1Q5SVZ6 1142 aa17.12■□□□□ 0.33
MSH5-201ENST00000375703 NAA16Q6N069 864 aaPredicted RBP17.12■□□□□ 0.33
MSH5-201ENST00000375703 TTLL7Q6ZT98 887 aa17.12■□□□□ 0.33
MSH5-201ENST00000375703 CCDC186Q7Z3E2 898 aa17.12■□□□□ 0.33
MSH5-201ENST00000375703 DNAJC25Q9H1X3 360 aa17.12■□□□□ 0.33
MSH5-201ENST00000375703 KIF3AQ9Y496 699 aa17.12■□□□□ 0.33
MSH5-201ENST00000375703 CCT2P78371 535 aaKnown RBP17.12■□□□□ 0.33
MSH5-201ENST00000375703 TDRD7Q8NHU6 1098 aaKnown RBP17.12■□□□□ 0.33
MSH5-201ENST00000375703 AFDNP55196 1824 aaKnown RBP17.11■□□□□ 0.33
MSH5-201ENST00000375703 CTDNEP1O95476 244 aa17.11■□□□□ 0.33
MSH5-201ENST00000375703 IFIT1P09914 478 aaKnown RBP17.11■□□□□ 0.33
MSH5-201ENST00000375703 HSPD1P10809 573 aaKnown RBP17.11■□□□□ 0.33
MSH5-201ENST00000375703 ADD1P35611 737 aaKnown RBP17.11■□□□□ 0.33
MSH5-201ENST00000375703 RCOR1Q9UKL0 485 aa17.11■□□□□ 0.33
MSH5-201ENST00000375703 NAP1L2Q9ULW6 460 aaPredicted RBP17.11■□□□□ 0.33
MSH5-201ENST00000375703 ALS2Q96Q42 1657 aa17.11■□□□□ 0.33
MSH5-201ENST00000375703 PTPDC1A2A3K4 754 aa17.11■□□□□ 0.33
MSH5-201ENST00000375703 E7EWF7 191 aa17.11■□□□□ 0.33
MSH5-201ENST00000375703 ZNF75DP51815 510 aa17.11■□□□□ 0.33
MSH5-201ENST00000375703 LRRC24Q50LG9 513 aa17.11■□□□□ 0.33
MSH5-201ENST00000375703 TICAM2Q86XR7 235 aa17.11■□□□□ 0.33
MSH5-201ENST00000375703 TSC1Q92574 1164 aa17.11■□□□□ 0.33
MSH5-201ENST00000375703 PLA2G4DQ86XP0 818 aa17.1■□□□□ 0.33
MSH5-201ENST00000375703 ZNF594Q96JF6 807 aaPredicted RBP17.1■□□□□ 0.33
MSH5-201ENST00000375703 AGXT2Q9BYV1 514 aa17.1■□□□□ 0.33
MSH5-201ENST00000375703 EYA2O00167 538 aa17.1■□□□□ 0.33
MSH5-201ENST00000375703 RNF113AO15541 343 aaKnown RBP17.1■□□□□ 0.33
MSH5-201ENST00000375703 CAVIN2O95810 425 aa17.1■□□□□ 0.33
MSH5-201ENST00000375703 CHAF1AQ13111 956 aaPredicted RBP17.1■□□□□ 0.33
MSH5-201ENST00000375703 CCAR1Q8IX12 1150 aaKnown RBP17.1■□□□□ 0.33
MSH5-201ENST00000375703 A0A0G2JLW4 131 aa17.09■□□□□ 0.33
MSH5-201ENST00000375703 A1BGP04217 495 aa17.09■□□□□ 0.33
MSH5-201ENST00000375703 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.09■□□□□ 0.33
MSH5-201ENST00000375703 NRBP1Q9UHY1 535 aa17.09■□□□□ 0.33
MSH5-201ENST00000375703 ARFGEF2Q9Y6D5 1785 aa17.09■□□□□ 0.33
MSH5-201ENST00000375703 PLEKHG2Q9H7P9 1386 aa17.09■□□□□ 0.33
MSH5-201ENST00000375703 NCOA5Q9HCD5 579 aaKnown RBP17.09■□□□□ 0.33
MSH5-201ENST00000375703 A0A1B0GUL7 405 aa17.08■□□□□ 0.33
MSH5-201ENST00000375703 CHST3Q7LGC8 479 aa17.08■□□□□ 0.33
MSH5-201ENST00000375703 CCDC191Q8NCU4 936 aa17.08■□□□□ 0.33
MSH5-201ENST00000375703 ZNF274Q96GC6 653 aaPredicted RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms