RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 NUP98P52948 1817 aa8.45□□□□□ -1.06
RNU1-55P-201ENST00000365510 FZD9O00144 591 aa8.45□□□□□ -1.06
RNU1-55P-201ENST00000365510 HMMRO75330 724 aa8.45□□□□□ -1.06
RNU1-55P-201ENST00000365510 NBPF7P0C2Y1 421 aaPredicted RBP8.45□□□□□ -1.06
RNU1-55P-201ENST00000365510 HSP90B1P14625 803 aaKnown RBP8.45□□□□□ -1.06
RNU1-55P-201ENST00000365510 CTCFP49711 727 aaPredicted RBP8.45□□□□□ -1.06
RNU1-55P-201ENST00000365510 UBE3BQ7Z3V4 1068 aa8.45□□□□□ -1.06
RNU1-55P-201ENST00000365510 PPP1R42Q7Z4L9 355 aa8.45□□□□□ -1.06
RNU1-55P-201ENST00000365510 ZNF34Q8IZ26 560 aa8.45□□□□□ -1.06
RNU1-55P-201ENST00000365510 UTP14AQ9BVJ6 771 aaKnown RBP8.45□□□□□ -1.06
RNU1-55P-201ENST00000365510 LRRFIP2Q9Y608 721 aaKnown RBP8.45□□□□□ -1.06
RNU1-55P-201ENST00000365510 UBN2Q6ZU65 1347 aa8.45□□□□□ -1.06
RNU1-55P-201ENST00000365510 WDR33Q9C0J8 1336 aaKnown RBP8.45□□□□□ -1.06
RNU1-55P-201ENST00000365510 CCDC85CA6NKD9 419 aa8.44□□□□□ -1.06
RNU1-55P-201ENST00000365510 PCCAP05165 728 aaPredicted RBP8.44□□□□□ -1.06
RNU1-55P-201ENST00000365510 FAM161AQ3B820 660 aa8.44□□□□□ -1.06
RNU1-55P-201ENST00000365510 B4GALNT3Q6L9W6 998 aa8.44□□□□□ -1.06
RNU1-55P-201ENST00000365510 CEP85Q6P2H3 762 aa8.44□□□□□ -1.06
RNU1-55P-201ENST00000365510 RPAP2Q8IXW5 612 aaPredicted RBP8.44□□□□□ -1.06
RNU1-55P-201ENST00000365510 ABHD8Q96I13 439 aa8.44□□□□□ -1.06
RNU1-55P-201ENST00000365510 NYXQ9GZU5 481 aa8.44□□□□□ -1.06
RNU1-55P-201ENST00000365510 RWDD1Q9H446 243 aaPredicted RBP8.44□□□□□ -1.06
RNU1-55P-201ENST00000365510 TRMT112Q9UI30 125 aaKnown RBP8.44□□□□□ -1.06
RNU1-55P-201ENST00000365510 PDZRN3Q9UPQ7 1066 aa8.44□□□□□ -1.06
RNU1-55P-201ENST00000365510 PCDHB15Q9Y5E8 787 aa8.44□□□□□ -1.06
RNU1-55P-201ENST00000365510 SH3TC1Q8TE82 1336 aa8.44□□□□□ -1.06
RNU1-55P-201ENST00000365510 CDHR2Q9BYE9 1310 aa8.44□□□□□ -1.06
RNU1-55P-201ENST00000365510 LTBP1Q14766 1721 aa8.43□□□□□ -1.06
RNU1-55P-201ENST00000365510 IQCA1LA6NCM1 817 aa8.43□□□□□ -1.06
RNU1-55P-201ENST00000365510 H7C1W4 665 aa8.43□□□□□ -1.06
RNU1-55P-201ENST00000365510 SCNN1DP51172 638 aa8.43□□□□□ -1.06
RNU1-55P-201ENST00000365510 HDAC1Q13547 482 aaPredicted RBP8.43□□□□□ -1.06
RNU1-55P-201ENST00000365510 CENPQQ7L2Z9 268 aaPredicted RBP8.43□□□□□ -1.06
RNU1-55P-201ENST00000365510 RTKN2Q8IZC4 609 aa8.43□□□□□ -1.06
RNU1-55P-201ENST00000365510 ANKRD44Q8N8A2 993 aa8.43□□□□□ -1.06
RNU1-55P-201ENST00000365510 AIDAQ96BJ3 306 aa8.43□□□□□ -1.06
RNU1-55P-201ENST00000365510 SUCLG2Q96I99 432 aa8.43□□□□□ -1.06
RNU1-55P-201ENST00000365510 GLIS2Q9BZE0 524 aaPredicted RBP8.43□□□□□ -1.06
RNU1-55P-201ENST00000365510 BICC1Q9H694 974 aaKnown RBP8.43□□□□□ -1.06
RNU1-55P-201ENST00000365510 PRDM10Q9NQV6 1147 aa8.43□□□□□ -1.06
RNU1-55P-201ENST00000365510 RASSF10A6NK89 507 aa8.42□□□□□ -1.06
RNU1-55P-201ENST00000365510 IRS4O14654 1257 aaPredicted RBP8.42□□□□□ -1.06
RNU1-55P-201ENST00000365510 SRGAP3O43295 1099 aa8.42□□□□□ -1.06
RNU1-55P-201ENST00000365510 NTSR2O95665 410 aa8.42□□□□□ -1.06
RNU1-55P-201ENST00000365510 HCLS1P14317 486 aaPredicted RBP8.42□□□□□ -1.06
RNU1-55P-201ENST00000365510 ALDH1B1P30837 517 aa8.42□□□□□ -1.06
RNU1-55P-201ENST00000365510 HIRAP54198 1017 aaPredicted RBP8.42□□□□□ -1.06
RNU1-55P-201ENST00000365510 CASP7P55210 303 aa8.42□□□□□ -1.06
RNU1-55P-201ENST00000365510 AOC3Q16853 763 aa8.42□□□□□ -1.06
RNU1-55P-201ENST00000365510 RTL5Q5HYW3 569 aaPredicted RBP8.42□□□□□ -1.06
RNU1-55P-201ENST00000365510 LARGE2Q8N3Y3 721 aa8.42□□□□□ -1.06
RNU1-55P-201ENST00000365510 FAM89AQ96GI7 184 aa8.42□□□□□ -1.06
RNU1-55P-201ENST00000365510 CAPNS2Q96L46 248 aa8.42□□□□□ -1.06
RNU1-55P-201ENST00000365510 PLA2G12BQ9BX93 195 aa8.42□□□□□ -1.06
RNU1-55P-201ENST00000365510 ZNF408Q9H9D4 720 aa8.42□□□□□ -1.06
RNU1-55P-201ENST00000365510 KCNQ5Q9NR82 932 aa8.42□□□□□ -1.06
RNU1-55P-201ENST00000365510 TAF1P21675 1872 aa8.42□□□□□ -1.06
RNU1-55P-201ENST00000365510 CASP8AP2Q9UKL3 1982 aa8.42□□□□□ -1.06
RNU1-55P-201ENST00000365510 LAMB2P55268 1798 aa8.41□□□□□ -1.06
RNU1-55P-201ENST00000365510 RAD17O75943 681 aa8.41□□□□□ -1.06
RNU1-55P-201ENST00000365510 CTSWP56202 376 aa8.41□□□□□ -1.06
RNU1-55P-201ENST00000365510 EIF6P56537 245 aaKnown RBP8.41□□□□□ -1.06
RNU1-55P-201ENST00000365510 CXCL9Q07325 125 aa8.41□□□□□ -1.06
RNU1-55P-201ENST00000365510 MTX1Q13505 466 aa8.41□□□□□ -1.06
RNU1-55P-201ENST00000365510 RABL6Q3YEC7 729 aaPredicted RBP8.41□□□□□ -1.06
RNU1-55P-201ENST00000365510 SOGA3Q5TF21 947 aa8.41□□□□□ -1.06
RNU1-55P-201ENST00000365510 GPC2Q8N158 579 aa8.41□□□□□ -1.06
RNU1-55P-201ENST00000365510 JDP2Q8WYK2 163 aa8.41□□□□□ -1.06
RNU1-55P-201ENST00000365510 JARID2Q92833 1246 aaPredicted RBP8.41□□□□□ -1.06
RNU1-55P-201ENST00000365510 GPR101Q96P66 508 aaPredicted RBP8.41□□□□□ -1.06
RNU1-55P-201ENST00000365510 CHMP3Q9Y3E7 222 aa8.41□□□□□ -1.06
RNU1-55P-201ENST00000365510 SCN4AP35499 1836 aa8.4□□□□□ -1.06
RNU1-55P-201ENST00000365510 SNED1Q8TER0 1413 aa8.4□□□□□ -1.06
RNU1-55P-201ENST00000365510 PPIP5K2O43314 1243 aa8.4□□□□□ -1.06
RNU1-55P-201ENST00000365510 PDE8AO60658 829 aa8.4□□□□□ -1.06
RNU1-55P-201ENST00000365510 GMPSP49915 693 aaPredicted RBP8.4□□□□□ -1.06
RNU1-55P-201ENST00000365510 ATP8B2P98198 1209 aa8.4□□□□□ -1.06
RNU1-55P-201ENST00000365510 CRY2Q49AN0 593 aa8.4□□□□□ -1.06
RNU1-55P-201ENST00000365510 RBM26Q5T8P6 1007 aaKnown RBP8.4□□□□□ -1.06
RNU1-55P-201ENST00000365510 SIRT2Q8IXJ6 389 aa8.4□□□□□ -1.06
RNU1-55P-201ENST00000365510 SSH3Q8TE77 659 aa8.4□□□□□ -1.06
RNU1-55P-201ENST00000365510 RPGRQ92834 1020 aaKnown RBP8.4□□□□□ -1.06
RNU1-55P-201ENST00000365510 GCC1Q96CN9 775 aa8.4□□□□□ -1.06
RNU1-55P-201ENST00000365510 KAZALD1Q96I82 304 aa8.4□□□□□ -1.06
RNU1-55P-201ENST00000365510 SCAF8Q9UPN6 1271 aaKnown RBP8.4□□□□□ -1.06
RNU1-55P-201ENST00000365510 ZBTB12Q9Y330 459 aaPredicted RBP8.4□□□□□ -1.06
RNU1-55P-201ENST00000365510 RIC1Q4ADV7 1423 aa8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 POLR2AP24928 1970 aaKnown RBP8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 PNMA6EA0A0J9YXQ4 647 aa8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 PPEF1O14829 653 aaPredicted RBP8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 CELF2O95319 508 aaKnown RBP8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 EGFRP00533 1210 aa8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 IGHDP01880 384 aa8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 HOXA10P31260 410 aaPredicted RBP8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 FOXO4P98177 505 aa8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 POLA2Q14181 598 aa8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 CCDC57Q2TAC2 916 aa8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 CCDC152Q4G0S7 254 aa8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 HSP90AB4PQ58FF6 505 aa8.39□□□□□ -1.07
RNU1-55P-201ENST00000365510 EPHA10Q5JZY3 1008 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms