RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 SPINK5Q9NQ38 1064 aaPredicted RBP14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 DBF4Q9UBU7 674 aaPredicted RBP14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 PAIP2Q9BPZ3 127 aaKnown RBP14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 MAP3K9P80192 1104 aa14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 ESCO1Q5FWF5 840 aa14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 SREK1Q8WXA9 508 aaKnown RBP14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 ALG1Q9BT22 464 aa14.45□□□□□ -0.1
SYNCRIP-201ENST00000355238 FERP16591 822 aa14.44□□□□□ -0.1
SYNCRIP-201ENST00000355238 ATP11AP98196 1134 aa14.44□□□□□ -0.1
SYNCRIP-201ENST00000355238 PIK3R4Q99570 1358 aa14.44□□□□□ -0.1
SYNCRIP-201ENST00000355238 KLF18A0A0U1RQI7 1052 aa14.44□□□□□ -0.1
SYNCRIP-201ENST00000355238 ZBTB16Q05516 673 aa14.44□□□□□ -0.1
SYNCRIP-201ENST00000355238 HSP90AA4PQ58FG1 418 aa14.44□□□□□ -0.1
SYNCRIP-201ENST00000355238 TBC1D5Q92609 795 aa14.44□□□□□ -0.1
SYNCRIP-201ENST00000355238 MBIPQ9NS73 344 aa14.44□□□□□ -0.1
SYNCRIP-201ENST00000355238 IMPACTQ9P2X3 320 aa14.44□□□□□ -0.1
SYNCRIP-201ENST00000355238 SEC24BO95487 1268 aa14.44□□□□□ -0.1
SYNCRIP-201ENST00000355238 AFMP43652 599 aa14.44□□□□□ -0.1
SYNCRIP-201ENST00000355238 TRIM7Q9C029 511 aa14.44□□□□□ -0.1
SYNCRIP-201ENST00000355238 SWAP70Q9UH65 585 aa14.44□□□□□ -0.1
SYNCRIP-201ENST00000355238 CHMP4BP1P59074 171 aa14.44□□□□□ -0.1
SYNCRIP-201ENST00000355238 CCDC61Q9Y6R9 512 aa14.44□□□□□ -0.1
SYNCRIP-201ENST00000355238 PRC1O43663 620 aa14.43□□□□□ -0.1
SYNCRIP-201ENST00000355238 ZFYP08048 801 aaPredicted RBP14.43□□□□□ -0.1
SYNCRIP-201ENST00000355238 MAP2K2P36507 400 aa14.43□□□□□ -0.1
SYNCRIP-201ENST00000355238 NBPF7P0C2Y1 421 aaPredicted RBP14.43□□□□□ -0.1
SYNCRIP-201ENST00000355238 MYL5Q02045 173 aa14.43□□□□□ -0.1
SYNCRIP-201ENST00000355238 AKR1B15C9JRZ8 316 aaPredicted RBP14.43□□□□□ -0.1
SYNCRIP-201ENST00000355238 ACTN2P35609 894 aa14.43□□□□□ -0.1
SYNCRIP-201ENST00000355238 BCL2L12Q9HB09 334 aa14.43□□□□□ -0.1
SYNCRIP-201ENST00000355238 GOLGA6CA6NDK9 693 aa14.43□□□□□ -0.1
SYNCRIP-201ENST00000355238 GOLGA6DP0CG33 693 aa14.43□□□□□ -0.1
SYNCRIP-201ENST00000355238 AK2P54819 239 aa14.43□□□□□ -0.1
SYNCRIP-201ENST00000355238 USP26Q9BXU7 913 aa14.43□□□□□ -0.1
SYNCRIP-201ENST00000355238 GOLGA6AQ9NYA3 693 aa14.43□□□□□ -0.1
SYNCRIP-201ENST00000355238 CAMSAP2Q08AD1 1489 aa14.43□□□□□ -0.1
SYNCRIP-201ENST00000355238 STAT6P42226 847 aa14.43□□□□□ -0.1
SYNCRIP-201ENST00000355238 NAPGQ99747 312 aaPredicted RBP14.43□□□□□ -0.1
SYNCRIP-201ENST00000355238 CLGNO14967 610 aa14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 VGLL3A8MV65 326 aa14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 ZNF75DP51815 510 aa14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 TSNARE1Q96NA8 513 aa14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 NAP1L3Q99457 506 aaPredicted RBP14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 MTRF1LQ9UGC7 380 aaKnown RBP14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 SCAF11Q99590 1463 aaKnown RBP14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 Q6ZUG5 572 aa14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 NUTM2AQ8IVF1 878 aaPredicted RBP14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 IFT81Q8WYA0 676 aa14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 TTF2Q9UNY4 1162 aaKnown RBP14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 LUC7L2Q9Y383 392 aaKnown RBP14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 TTC21AQ8NDW8 1320 aa14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 OAS2P29728 719 aaKnown RBP14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 BRAPQ7Z569 592 aa14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 PTPN23Q9H3S7 1636 aa14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 PRG4Q92954 1404 aaPredicted RBP14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 ATP2A1O14983 1001 aa14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 IFIT5Q13325 482 aaKnown RBP14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 PPP1R9BQ96SB3 815 aa14.42□□□□□ -0.1
SYNCRIP-201ENST00000355238 ZSCAN26Q16670 478 aa14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 CAVIN4Q5BKX8 364 aa14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 MYCBPQ99417 103 aaPredicted RBP14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 CARD6Q9BX69 1037 aa14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 BUB1BO60566 1050 aaPredicted RBP14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 MFSD6Q6ZSS7 791 aa14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 CCDC144CPQ8IYA2 1237 aa14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 ZNF444Q8N0Y2 327 aaPredicted RBP14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 ZBTB43O43298 467 aa14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 SPTY2D1Q68D10 685 aaPredicted RBP14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 CACNA2D3Q8IZS8 1091 aa14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 WDHD1O75717 1129 aaPredicted RBP14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 SLC5A1P13866 664 aa14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 MARCKSP29966 332 aaPredicted RBP14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 FMNL3Q8IVF7 1028 aa14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 TMTC2Q8N394 836 aa14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 NOL3O60936 208 aaKnown RBP14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 GIGYF1O75420 1035 aaPredicted RBP14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 DCTPP1Q9H773 170 aa14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 BICDL2A1A5D9 508 aa14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 SETSIPP0DME0 302 aa14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 FAM160A1Q05DH4 1040 aa14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 UTP14CQ5TAP6 766 aaKnown RBP14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 NUDT16Q96DE0 195 aaKnown RBP14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 FEZ2Q9UHY8 353 aaPredicted RBP14.41□□□□□ -0.1
SYNCRIP-201ENST00000355238 KRT13P13646 458 aa14.4□□□□□ -0.1
SYNCRIP-201ENST00000355238 TRIM14Q14142 442 aa14.4□□□□□ -0.1
SYNCRIP-201ENST00000355238 AMOTQ4VCS5 1084 aa14.4□□□□□ -0.1
SYNCRIP-201ENST00000355238 UBXN1Q04323 297 aa14.4□□□□□ -0.1
SYNCRIP-201ENST00000355238 INTS8Q75QN2 995 aaKnown RBP14.4□□□□□ -0.1
SYNCRIP-201ENST00000355238 PCK1P35558 622 aa14.4□□□□□ -0.1
SYNCRIP-201ENST00000355238 CCDC85AQ96PX6 553 aaPredicted RBP14.4□□□□□ -0.1
SYNCRIP-201ENST00000355238 PARD3Q8TEW0 1356 aa14.4□□□□□ -0.1
SYNCRIP-201ENST00000355238 ATP5DP30049 168 aa14.4□□□□□ -0.1
SYNCRIP-201ENST00000355238 ALDH3A1P30838 453 aa14.4□□□□□ -0.1
SYNCRIP-201ENST00000355238 GBP1P32455 592 aa14.4□□□□□ -0.1
SYNCRIP-201ENST00000355238 GRIPAP1Q4V328 841 aa14.4□□□□□ -0.1
SYNCRIP-201ENST00000355238 STMN2Q93045 179 aa14.4□□□□□ -0.1
SYNCRIP-201ENST00000355238 AQRO60306 1485 aaKnown RBP eCLIP14.4□□□□□ -0.11e-6■■■□□ 17.3
SYNCRIP-201ENST00000355238 HAND2P61296 217 aa14.4□□□□□ -0.11
SYNCRIP-201ENST00000355238 DMTNQ08495 405 aa14.4□□□□□ -0.11
SYNCRIP-201ENST00000355238 CCDC122Q5T0U0 273 aa14.4□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms