RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 ZCCHC17Q9NP64 241 aaKnown RBP8.97□□□□□ -0.97
KPNA1-201ENST00000344337 CBFA2T2O43439 604 aa8.97□□□□□ -0.97
KPNA1-201ENST00000344337 MCM5P33992 734 aa8.97□□□□□ -0.97
KPNA1-201ENST00000344337 MTX1Q13505 466 aa8.97□□□□□ -0.97
KPNA1-201ENST00000344337 CEP57Q86XR8 500 aa8.97□□□□□ -0.97
KPNA1-201ENST00000344337 TLR7Q9NYK1 1049 aaKnown RBP8.97□□□□□ -0.97
KPNA1-201ENST00000344337 RTL1A6NKG5 1358 aa8.97□□□□□ -0.97
KPNA1-201ENST00000344337 PPIP5K1Q6PFW1 1433 aa8.97□□□□□ -0.97
KPNA1-201ENST00000344337 PROSER2Q86WR7 435 aaPredicted RBP8.97□□□□□ -0.97
KPNA1-201ENST00000344337 IFT81Q8WYA0 676 aa8.97□□□□□ -0.97
KPNA1-201ENST00000344337 PAXBP1Q9Y5B6 917 aa8.97□□□□□ -0.97
KPNA1-201ENST00000344337 BAZ2BQ9UIF8 2168 aaKnown RBP8.97□□□□□ -0.97
KPNA1-201ENST00000344337 SLC27A2O14975 620 aa8.97□□□□□ -0.97
KPNA1-201ENST00000344337 ATF3P18847 181 aa8.97□□□□□ -0.97
KPNA1-201ENST00000344337 NOP2P46087 812 aaKnown RBP8.97□□□□□ -0.97
KPNA1-201ENST00000344337 LDHAL6AQ6ZMR3 332 aa8.97□□□□□ -0.97
KPNA1-201ENST00000344337 MAATS1Q7Z4T9 603 aa8.97□□□□□ -0.97
KPNA1-201ENST00000344337 SMAP1Q8IYB5 467 aaPredicted RBP8.97□□□□□ -0.97
KPNA1-201ENST00000344337 LEO1Q8WVC0 666 aaPredicted RBP8.97□□□□□ -0.97
KPNA1-201ENST00000344337 DBNDD2Q9BQY9 259 aa8.97□□□□□ -0.97
KPNA1-201ENST00000344337 ZNF692Q9BU19 519 aaPredicted RBP8.97□□□□□ -0.97
KPNA1-201ENST00000344337 PTPRCP08575 1304 aa8.97□□□□□ -0.97
KPNA1-201ENST00000344337 TMCO5BA8MYB1 307 aa8.97□□□□□ -0.97
KPNA1-201ENST00000344337 ZNF75DP51815 510 aa8.97□□□□□ -0.97
KPNA1-201ENST00000344337 SYCP2Q9BX26 1530 aa8.96□□□□□ -0.97
KPNA1-201ENST00000344337 GOLGA6L10A0A0M3HER8 536 aa8.96□□□□□ -0.97
KPNA1-201ENST00000344337 GOLGA6L10A6NI86 522 aa8.96□□□□□ -0.97
KPNA1-201ENST00000344337 IARSP41252 1262 aaKnown RBP8.96□□□□□ -0.97
KPNA1-201ENST00000344337 ZSCAN25Q6NSZ9 544 aa8.96□□□□□ -0.97
KPNA1-201ENST00000344337 TXLNAP40222 546 aa8.96□□□□□ -0.97
KPNA1-201ENST00000344337 KRT32Q14532 448 aa8.96□□□□□ -0.97
KPNA1-201ENST00000344337 CLIC6Q96NY7 704 aa8.96□□□□□ -0.97
KPNA1-201ENST00000344337 XPO4Q9C0E2 1151 aaKnown RBP8.96□□□□□ -0.97
KPNA1-201ENST00000344337 TCEAL9Q9UHQ7 104 aa8.96□□□□□ -0.97
KPNA1-201ENST00000344337 FAM135AQ9P2D6 1515 aa8.96□□□□□ -0.98
KPNA1-201ENST00000344337 CDR1P51861 262 aa8.96□□□□□ -0.98
KPNA1-201ENST00000344337 PNOCQ13519 176 aa8.96□□□□□ -0.98
KPNA1-201ENST00000344337 CACTINQ8WUQ7 758 aaKnown RBP8.96□□□□□ -0.98
KPNA1-201ENST00000344337 POLD4Q9HCU8 107 aa8.96□□□□□ -0.98
KPNA1-201ENST00000344337 A0A0D9SFI3 127 aa8.96□□□□□ -0.98
KPNA1-201ENST00000344337 ATRIPQ8WXE1 791 aa8.96□□□□□ -0.98
KPNA1-201ENST00000344337 PPP1R9BQ96SB3 815 aa8.96□□□□□ -0.98
KPNA1-201ENST00000344337 DBF4Q9UBU7 674 aaPredicted RBP8.96□□□□□ -0.98
KPNA1-201ENST00000344337 ABCC11Q96J66 1382 aa8.96□□□□□ -0.98
KPNA1-201ENST00000344337 B4E1Z4 1266 aa8.96□□□□□ -0.98
KPNA1-201ENST00000344337 ZSCAN12O43309 604 aa8.96□□□□□ -0.98
KPNA1-201ENST00000344337 PRDM1O75626 825 aa8.96□□□□□ -0.98
KPNA1-201ENST00000344337 ECM2O94769 699 aaPredicted RBP8.96□□□□□ -0.98
KPNA1-201ENST00000344337 NLRP5P59047 1200 aa8.96□□□□□ -0.98
KPNA1-201ENST00000344337 URB2Q14146 1524 aaKnown RBP8.96□□□□□ -0.98
KPNA1-201ENST00000344337 UVSSAQ2YD98 709 aa8.96□□□□□ -0.98
KPNA1-201ENST00000344337 MRPS27Q92552 414 aaKnown RBP8.96□□□□□ -0.98
KPNA1-201ENST00000344337 KCNJ14Q9UNX9 436 aa8.96□□□□□ -0.98
KPNA1-201ENST00000344337 GRM8O00222 908 aa8.95□□□□□ -0.98
KPNA1-201ENST00000344337 MPHOSPH10O00566 681 aaKnown RBP8.95□□□□□ -0.98
KPNA1-201ENST00000344337 SPTLC2O15270 562 aa8.95□□□□□ -0.98
KPNA1-201ENST00000344337 CACNA2D4Q7Z3S7 1137 aa8.95□□□□□ -0.98
KPNA1-201ENST00000344337 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.95□□□□□ -0.98
KPNA1-201ENST00000344337 POLR2DO15514 142 aaKnown RBP8.95□□□□□ -0.98
KPNA1-201ENST00000344337 MTIF2P46199 727 aaKnown RBP8.95□□□□□ -0.98
KPNA1-201ENST00000344337 TTC16Q8NEE8 873 aa8.95□□□□□ -0.98
KPNA1-201ENST00000344337 FRMD3A2A2Y4 597 aa8.95□□□□□ -0.98
KPNA1-201ENST00000344337 BRD1O95696 1058 aa8.95□□□□□ -0.98
KPNA1-201ENST00000344337 PPP2R3AQ06190 1150 aa8.95□□□□□ -0.98
KPNA1-201ENST00000344337 SSRP1Q08945 709 aaKnown RBP8.95□□□□□ -0.98
KPNA1-201ENST00000344337 ZNF397Q8NF99 534 aaPredicted RBP8.95□□□□□ -0.98
KPNA1-201ENST00000344337 GPHNQ9NQX3 736 aaPredicted RBP8.95□□□□□ -0.98
KPNA1-201ENST00000344337 PRC1O43663 620 aa8.95□□□□□ -0.98
KPNA1-201ENST00000344337 RAD51AP2Q09MP3 1159 aa8.95□□□□□ -0.98
KPNA1-201ENST00000344337 RRAGBQ5VZM2 374 aa8.95□□□□□ -0.98
KPNA1-201ENST00000344337 OGFRQ9NZT2 677 aa8.95□□□□□ -0.98
KPNA1-201ENST00000344337 UBE4AQ14139 1066 aa8.95□□□□□ -0.98
KPNA1-201ENST00000344337 LLGL1Q15334 1064 aa8.95□□□□□ -0.98
KPNA1-201ENST00000344337 CCDC102BQ68D86 513 aa8.95□□□□□ -0.98
KPNA1-201ENST00000344337 SRCAPQ6ZRS2 3230 aa8.95□□□□□ -0.98
KPNA1-201ENST00000344337 USP27XA6NNY8 438 aa8.94□□□□□ -0.98
KPNA1-201ENST00000344337 HPDP32754 393 aaPredicted RBP8.94□□□□□ -0.98
KPNA1-201ENST00000344337 TCERG1LQ5VWI1 586 aa8.94□□□□□ -0.98
KPNA1-201ENST00000344337 SLC9C2Q5TAH2 1124 aa8.94□□□□□ -0.98
KPNA1-201ENST00000344337 ANKRD13DQ6ZTN6 518 aa8.94□□□□□ -0.98
KPNA1-201ENST00000344337 CCDC148Q8NFR7 591 aa8.94□□□□□ -0.98
KPNA1-201ENST00000344337 CCDC43Q96MW1 224 aaKnown RBP8.94□□□□□ -0.98
KPNA1-201ENST00000344337 TRAPPC8Q9Y2L5 1435 aa8.94□□□□□ -0.98
KPNA1-201ENST00000344337 OAS2P29728 719 aaKnown RBP8.94□□□□□ -0.98
KPNA1-201ENST00000344337 MCM7P33993 719 aa8.94□□□□□ -0.98
KPNA1-201ENST00000344337 USP8P40818 1118 aa8.94□□□□□ -0.98
KPNA1-201ENST00000344337 ZNF174Q15697 407 aa8.94□□□□□ -0.98
KPNA1-201ENST00000344337 CABP5Q9NP86 173 aa8.94□□□□□ -0.98
KPNA1-201ENST00000344337 TRMT112Q9UI30 125 aaKnown RBP8.94□□□□□ -0.98
KPNA1-201ENST00000344337 PEG3Q9GZU2 1588 aa8.94□□□□□ -0.98
KPNA1-201ENST00000344337 RBM5P52756 815 aaKnown RBP eCLIP8.94□□□□□ -0.98
KPNA1-201ENST00000344337 E2F4Q16254 413 aa8.94□□□□□ -0.98
KPNA1-201ENST00000344337 SMYD4Q8IYR2 804 aaPredicted RBP8.94□□□□□ -0.98
KPNA1-201ENST00000344337 GRAMD1CQ8IYS0 662 aa8.94□□□□□ -0.98
KPNA1-201ENST00000344337 BLZF1Q9H2G9 400 aa8.94□□□□□ -0.98
KPNA1-201ENST00000344337 NUP153P49790 1475 aaKnown RBP8.94□□□□□ -0.98
KPNA1-201ENST00000344337 CCP110O43303 1012 aa8.94□□□□□ -0.98
KPNA1-201ENST00000344337 TRIM21P19474 475 aaKnown RBP8.94□□□□□ -0.98
KPNA1-201ENST00000344337 C11orf57Q6ZUT1 292 aaPredicted RBP8.94□□□□□ -0.98
KPNA1-201ENST00000344337 PRDM11Q9NQV5 511 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms