RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 ARAP2Q8WZ64 1704 aa15.89■□□□□ 0.13
TPM3-204ENST00000323144 ZNF609O15014 1411 aa15.89■□□□□ 0.13
TPM3-204ENST00000323144 PDE8AO60658 829 aa15.89■□□□□ 0.13
TPM3-204ENST00000323144 CAPN15O75808 1086 aa15.89■□□□□ 0.13
TPM3-204ENST00000323144 RPS8P62241 208 aaKnown RBP15.89■□□□□ 0.13
TPM3-204ENST00000323144 CCDC152Q4G0S7 254 aa15.89■□□□□ 0.13
TPM3-204ENST00000323144 CST9Q5W186 159 aa15.89■□□□□ 0.13
TPM3-204ENST00000323144 STK31Q9BXU1 1019 aa15.89■□□□□ 0.13
TPM3-204ENST00000323144 SALL2Q9Y467 1007 aaPredicted RBP15.89■□□□□ 0.13
TPM3-204ENST00000323144 NEURL1BA8MQ27 555 aa15.88■□□□□ 0.13
TPM3-204ENST00000323144 TNIP1Q15025 636 aa15.88■□□□□ 0.13
TPM3-204ENST00000323144 KSR2Q6VAB6 950 aa15.88■□□□□ 0.13
TPM3-204ENST00000323144 WDR33Q9C0J8 1336 aaKnown RBP15.88■□□□□ 0.13
TPM3-204ENST00000323144 ZNF316A6NFI3 1004 aaPredicted RBP15.87■□□□□ 0.13
TPM3-204ENST00000323144 GRM1Q13255 1194 aa15.87■□□□□ 0.13
TPM3-204ENST00000323144 CYP4F22Q6NT55 531 aa15.87■□□□□ 0.13
TPM3-204ENST00000323144 DLK2Q6UY11 383 aa15.87■□□□□ 0.13
TPM3-204ENST00000323144 PAXIP1Q6ZW49 1069 aaPredicted RBP15.87■□□□□ 0.13
TPM3-204ENST00000323144 GREM2Q9H772 168 aa15.87■□□□□ 0.13
TPM3-204ENST00000323144 PODXL2Q9NZ53 605 aa15.87■□□□□ 0.13
TPM3-204ENST00000323144 CNOT7Q9UIV1 285 aaKnown RBP15.87■□□□□ 0.13
TPM3-204ENST00000323144 ECM29Q5VYK3 1845 aa15.87■□□□□ 0.13
TPM3-204ENST00000323144 WTIPA6NIX2 430 aaPredicted RBP15.86■□□□□ 0.13
TPM3-204ENST00000323144 ANP32CO43423 234 aa15.86■□□□□ 0.13
TPM3-204ENST00000323144 ZEB1P37275 1124 aaPredicted RBP15.86■□□□□ 0.13
TPM3-204ENST00000323144 FLIIQ13045 1269 aa15.86■□□□□ 0.13
TPM3-204ENST00000323144 DEFB115Q30KQ5 88 aa15.86■□□□□ 0.13
TPM3-204ENST00000323144 TBC1D10BQ4KMP7 808 aaPredicted RBP15.86■□□□□ 0.13
TPM3-204ENST00000323144 SAMD7Q7Z3H4 446 aa15.86■□□□□ 0.13
TPM3-204ENST00000323144 UBE3BQ7Z3V4 1068 aa15.86■□□□□ 0.13
TPM3-204ENST00000323144 CAPNS2Q96L46 248 aa15.86■□□□□ 0.13
TPM3-204ENST00000323144 EYA3Q99504 573 aa15.86■□□□□ 0.13
TPM3-204ENST00000323144 ZNF408Q9H9D4 720 aa15.86■□□□□ 0.13
TPM3-204ENST00000323144 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
TPM3-204ENST00000323144 GGA1Q9UJY5 639 aa15.86■□□□□ 0.13
TPM3-204ENST00000323144 TLL2Q9Y6L7 1015 aa15.86■□□□□ 0.13
TPM3-204ENST00000323144 CELF2O95319 508 aaKnown RBP15.85■□□□□ 0.13
TPM3-204ENST00000323144 ANKRD18AQ8IVF6 992 aa15.85■□□□□ 0.13
TPM3-204ENST00000323144 ANKIB1Q9P2G1 1089 aa15.85■□□□□ 0.13
TPM3-204ENST00000323144 ASTN2O75129 1339 aaPredicted RBP15.85■□□□□ 0.13
TPM3-204ENST00000323144 XDHP47989 1333 aa15.85■□□□□ 0.13
TPM3-204ENST00000323144 MED23Q9ULK4 1368 aa15.85■□□□□ 0.13
TPM3-204ENST00000323144 ADM5C9JUS6 153 aa15.84■□□□□ 0.13
TPM3-204ENST00000323144 SLC4A2P04920 1241 aa15.84■□□□□ 0.13
TPM3-204ENST00000323144 EXOSC9Q06265 439 aaKnown RBP15.84■□□□□ 0.13
TPM3-204ENST00000323144 NEXNQ0ZGT2 675 aa15.84■□□□□ 0.13
TPM3-204ENST00000323144 FAM161AQ3B820 660 aa15.84■□□□□ 0.13
TPM3-204ENST00000323144 AIDAQ96BJ3 306 aa15.84■□□□□ 0.13
TPM3-204ENST00000323144 WBP1LQ9NX94 342 aa15.84■□□□□ 0.13
TPM3-204ENST00000323144 PGAP2Q9UHJ9 254 aa15.84■□□□□ 0.13
TPM3-204ENST00000323144 PAPPA2Q9BXP8 1791 aa15.84■□□□□ 0.13
TPM3-204ENST00000323144 HSPA8P11142 646 aaKnown RBP15.83■□□□□ 0.12
TPM3-204ENST00000323144 HSP90B1P14625 803 aaKnown RBP15.83■□□□□ 0.12
TPM3-204ENST00000323144 CASP7P55210 303 aa15.83■□□□□ 0.12
TPM3-204ENST00000323144 FKBP5Q13451 457 aaPredicted RBP15.83■□□□□ 0.12
TPM3-204ENST00000323144 KIF4BQ2VIQ3 1234 aa15.83■□□□□ 0.12
TPM3-204ENST00000323144 TTLL11Q8NHH1 800 aa15.83■□□□□ 0.12
TPM3-204ENST00000323144 H7C1D1 291 aa15.82■□□□□ 0.12
TPM3-204ENST00000323144 AOC2O75106 756 aa15.82■□□□□ 0.12
TPM3-204ENST00000323144 RPS12P25398 132 aaKnown RBP15.82■□□□□ 0.12
TPM3-204ENST00000323144 CTCFP49711 727 aaPredicted RBP15.82■□□□□ 0.12
TPM3-204ENST00000323144 GCKRQ14397 625 aa15.82■□□□□ 0.12
TPM3-204ENST00000323144 SAPCD2Q86UD0 394 aa15.82■□□□□ 0.12
TPM3-204ENST00000323144 DPF2Q92785 391 aa15.82■□□□□ 0.12
TPM3-204ENST00000323144 CDC5LQ99459 802 aaKnown RBP15.82■□□□□ 0.12
TPM3-204ENST00000323144 GGA3Q9NZ52 723 aa15.82■□□□□ 0.12
TPM3-204ENST00000323144 KLRK1P26718 216 aa15.81■□□□□ 0.12
TPM3-204ENST00000323144 LBX1P52954 281 aa15.81■□□□□ 0.12
TPM3-204ENST00000323144 NCBP3Q53F19 620 aaKnown RBP15.81■□□□□ 0.12
TPM3-204ENST00000323144 USP48Q86UV5 1035 aa15.81■□□□□ 0.12
TPM3-204ENST00000323144 ZC3H15Q8WU90 426 aaKnown RBP15.81■□□□□ 0.12
TPM3-204ENST00000323144 DNAAF4Q8WXU2 420 aa15.81■□□□□ 0.12
TPM3-204ENST00000323144 CHMP4AQ9BY43 222 aa15.81■□□□□ 0.12
TPM3-204ENST00000323144 ZC3H12CQ9C0D7 883 aaKnown RBP15.81■□□□□ 0.12
TPM3-204ENST00000323144 F6X3S4 739 aa15.8■□□□□ 0.12
TPM3-204ENST00000323144 H7C1W4 665 aa15.8■□□□□ 0.12
TPM3-204ENST00000323144 VAMP4O75379 141 aa15.8■□□□□ 0.12
TPM3-204ENST00000323144 RBM26Q5T8P6 1007 aaKnown RBP15.8■□□□□ 0.12
TPM3-204ENST00000323144 FAM9BQ8IZU0 186 aa15.8■□□□□ 0.12
TPM3-204ENST00000323144 VIL1P09327 827 aaKnown RBP15.79■□□□□ 0.12
TPM3-204ENST00000323144 ECE1P42892 770 aa15.79■□□□□ 0.12
TPM3-204ENST00000323144 RSBN1LQ6PCB5 846 aaPredicted RBP15.79■□□□□ 0.12
TPM3-204ENST00000323144 CDC37L1Q7L3B6 337 aa15.79■□□□□ 0.12
TPM3-204ENST00000323144 KRT26Q7Z3Y9 468 aa15.79■□□□□ 0.12
TPM3-204ENST00000323144 WDR63Q8IWG1 891 aa15.79■□□□□ 0.12
TPM3-204ENST00000323144 MXD3Q9BW11 206 aa15.79■□□□□ 0.12
TPM3-204ENST00000323144 PRDM10Q9NQV6 1147 aa15.79■□□□□ 0.12
TPM3-204ENST00000323144 TSKSQ9UJT2 592 aa15.79■□□□□ 0.12
TPM3-204ENST00000323144 MINPP1Q9UNW1 487 aa15.79■□□□□ 0.12
TPM3-204ENST00000323144 G3V3G9 751 aa15.78■□□□□ 0.12
TPM3-204ENST00000323144 ITGA6P23229 1130 aa15.78■□□□□ 0.12
TPM3-204ENST00000323144 ATP2B4P23634 1241 aa15.78■□□□□ 0.12
TPM3-204ENST00000323144 DCAF8Q5TAQ9 597 aa15.78■□□□□ 0.12
TPM3-204ENST00000323144 TXNRD3Q86VQ6 643 aa15.78■□□□□ 0.12
TPM3-204ENST00000323144 LINS1Q8NG48 757 aa15.78■□□□□ 0.12
TPM3-204ENST00000323144 PLA2G12BQ9BX93 195 aa15.78■□□□□ 0.12
TPM3-204ENST00000323144 MYH16Q9H6N6 1097 aa15.78■□□□□ 0.12
TPM3-204ENST00000323144 BSDC1Q9NW68 430 aaPredicted RBP15.78■□□□□ 0.12
TPM3-204ENST00000323144 ZNF521Q96K83 1311 aa15.77■□□□□ 0.12
TPM3-204ENST00000323144 OTOFQ9HC10 1997 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms