RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 GTPBP4Q9BZE4 634 aaKnown RBP20.52■□□□□ 0.88
TRAM1-201ENST00000262213 CFAP45Q9UL16 551 aa20.52■□□□□ 0.88
TRAM1-201ENST00000262213 KRT32Q14532 448 aa20.51■□□□□ 0.87
TRAM1-201ENST00000262213 IQCB1Q15051 598 aa20.51■□□□□ 0.87
TRAM1-201ENST00000262213 LRRC8AQ8IWT6 810 aa20.51■□□□□ 0.87
TRAM1-201ENST00000262213 MED1Q15648 1581 aaPredicted RBP20.51■□□□□ 0.87
TRAM1-201ENST00000262213 APOBRQ0VD83 1088 aa20.51■□□□□ 0.87
TRAM1-201ENST00000262213 NEXNQ0ZGT2 675 aa20.51■□□□□ 0.87
TRAM1-201ENST00000262213 ESCO1Q5FWF5 840 aa20.51■□□□□ 0.87
TRAM1-201ENST00000262213 NCOA5Q9HCD5 579 aaKnown RBP20.51■□□□□ 0.87
TRAM1-201ENST00000262213 XAGE3Q8WTP9 111 aa20.51■□□□□ 0.87
TRAM1-201ENST00000262213 DDX21Q9NR30 783 aaKnown RBP eCLIP20.51■□□□□ 0.87
TRAM1-201ENST00000262213 SKILP12757 684 aa20.5■□□□□ 0.87
TRAM1-201ENST00000262213 DBNDD2Q9BQY9 259 aa20.5■□□□□ 0.87
TRAM1-201ENST00000262213 ALDH8A1Q9H2A2 487 aaPredicted RBP20.5■□□□□ 0.87
TRAM1-201ENST00000262213 CCDC73Q6ZRK6 1079 aa20.5■□□□□ 0.87
TRAM1-201ENST00000262213 CHST3Q7LGC8 479 aa20.5■□□□□ 0.87
TRAM1-201ENST00000262213 PAXBP1Q9Y5B6 917 aa20.5■□□□□ 0.87
TRAM1-201ENST00000262213 NEURL1BA8MQ27 555 aa20.49■□□□□ 0.87
TRAM1-201ENST00000262213 NPHP1O15259 732 aa20.49■□□□□ 0.87
TRAM1-201ENST00000262213 STX1AQ16623 288 aa20.49■□□□□ 0.87
TRAM1-201ENST00000262213 STOX1Q6ZVD7 989 aa20.49■□□□□ 0.87
TRAM1-201ENST00000262213 COPS6Q7L5N1 327 aa20.49■□□□□ 0.87
TRAM1-201ENST00000262213 PDIA6Q15084 440 aa20.49■□□□□ 0.87
TRAM1-201ENST00000262213 TSGA10IPQ3SY00 556 aa20.49■□□□□ 0.87
TRAM1-201ENST00000262213 AMOTQ4VCS5 1084 aa20.49■□□□□ 0.87
TRAM1-201ENST00000262213 TNNI3KQ59H18 835 aa20.49■□□□□ 0.87
TRAM1-201ENST00000262213 USP28Q96RU2 1077 aa20.49■□□□□ 0.87
TRAM1-201ENST00000262213 ZSCAN16Q9H4T2 348 aaPredicted RBP20.49■□□□□ 0.87
TRAM1-201ENST00000262213 FPGT-TNNI3KV9GXZ4 949 aa20.49■□□□□ 0.87
TRAM1-201ENST00000262213 ZNF609O15014 1411 aa20.48■□□□□ 0.87
TRAM1-201ENST00000262213 ADGRL3Q9HAR2 1447 aa20.48■□□□□ 0.87
TRAM1-201ENST00000262213 CCDC69A6NI79 296 aa20.48■□□□□ 0.87
TRAM1-201ENST00000262213 ME1P48163 572 aa20.48■□□□□ 0.87
TRAM1-201ENST00000262213 CTNNA3Q9UI47 895 aa20.48■□□□□ 0.87
TRAM1-201ENST00000262213 A0A0G2JLW4 131 aa20.48■□□□□ 0.87
TRAM1-201ENST00000262213 PTPDC1A2A3K4 754 aa20.48■□□□□ 0.87
TRAM1-201ENST00000262213 KINO60870 393 aaKnown RBP20.48■□□□□ 0.87
TRAM1-201ENST00000262213 GCKRQ14397 625 aa20.48■□□□□ 0.87
TRAM1-201ENST00000262213 PTPN14Q15678 1187 aa20.48■□□□□ 0.87
TRAM1-201ENST00000262213 USPL1Q5W0Q7 1092 aa20.48■□□□□ 0.87
TRAM1-201ENST00000262213 ZNF771Q7L3S4 317 aaPredicted RBP20.47■□□□□ 0.87
TRAM1-201ENST00000262213 AOPEPQ8N6M6 819 aa20.47■□□□□ 0.87
TRAM1-201ENST00000262213 TAOK2Q9UL54 1235 aa20.47■□□□□ 0.87
TRAM1-201ENST00000262213 U3KPZ7 1027 aaPredicted RBP20.47■□□□□ 0.87
TRAM1-201ENST00000262213 ANKARQ7Z5J8 1434 aa20.47■□□□□ 0.87
TRAM1-201ENST00000262213 UTYO14607 1347 aa20.47■□□□□ 0.87
TRAM1-201ENST00000262213 ADD1P35611 737 aaKnown RBP20.47■□□□□ 0.87
TRAM1-201ENST00000262213 UBE3BQ7Z3V4 1068 aa20.47■□□□□ 0.87
TRAM1-201ENST00000262213 FSIP1Q8NA03 581 aa20.47■□□□□ 0.87
TRAM1-201ENST00000262213 NSUN7Q8NE18 718 aaKnown RBP20.47■□□□□ 0.87
TRAM1-201ENST00000262213 ANKRD24Q8TF21 1146 aa20.47■□□□□ 0.87
TRAM1-201ENST00000262213 SYTL4Q96C24 671 aaPredicted RBP20.47■□□□□ 0.87
TRAM1-201ENST00000262213 OGFRQ9NZT2 677 aa20.47■□□□□ 0.87
TRAM1-201ENST00000262213 ATP5J2-PTCD1G3V325 749 aa20.46■□□□□ 0.87
TRAM1-201ENST00000262213 PTCD1O75127 700 aaKnown RBP20.46■□□□□ 0.87
TRAM1-201ENST00000262213 ATP5JP18859 108 aa20.46■□□□□ 0.87
TRAM1-201ENST00000262213 FEZ1Q99689 392 aa20.46■□□□□ 0.87
TRAM1-201ENST00000262213 ZNF215Q9UL58 517 aaPredicted RBP20.46■□□□□ 0.87
TRAM1-201ENST00000262213 ZNF142P52746 1687 aaPredicted RBP20.46■□□□□ 0.87
TRAM1-201ENST00000262213 MCMDC2Q4G0Z9 681 aa20.46■□□□□ 0.87
TRAM1-201ENST00000262213 THEMISQ8N1K5 641 aaPredicted RBP20.46■□□□□ 0.87
TRAM1-201ENST00000262213 CGNQ9P2M7 1197 aaKnown RBP20.46■□□□□ 0.87
TRAM1-201ENST00000262213 CTDNEP1O95476 244 aa20.45■□□□□ 0.86
TRAM1-201ENST00000262213 CDC25BP30305 580 aa20.45■□□□□ 0.86
TRAM1-201ENST00000262213 DHX40Q8IX18 779 aaKnown RBP20.45■□□□□ 0.86
TRAM1-201ENST00000262213 NEUROD6Q96NK8 337 aa20.45■□□□□ 0.86
TRAM1-201ENST00000262213 JCADQ9P266 1359 aa20.44■□□□□ 0.86
TRAM1-201ENST00000262213 PTPN12Q05209 780 aaKnown RBP20.44■□□□□ 0.86
TRAM1-201ENST00000262213 SNW1Q13573 536 aaKnown RBP20.44■□□□□ 0.86
TRAM1-201ENST00000262213 OTUD7BQ6GQQ9 843 aa20.44■□□□□ 0.86
TRAM1-201ENST00000262213 MRFAP1L1Q96HT8 127 aa20.44■□□□□ 0.86
TRAM1-201ENST00000262213 GOLIM4O00461 696 aa20.44■□□□□ 0.86
TRAM1-201ENST00000262213 KCNH5Q8NCM2 988 aa20.44■□□□□ 0.86
TRAM1-201ENST00000262213 FMNL2Q96PY5 1086 aa20.44■□□□□ 0.86
TRAM1-201ENST00000262213 SDF4Q9BRK5 362 aa20.44■□□□□ 0.86
TRAM1-201ENST00000262213 RCOR1Q9UKL0 485 aa20.44■□□□□ 0.86
TRAM1-201ENST00000262213 PFKFB2O60825 505 aa20.43■□□□□ 0.86
TRAM1-201ENST00000262213 A0A1B0GVL5 298 aa20.43■□□□□ 0.86
TRAM1-201ENST00000262213 CAVIN2O95810 425 aa20.43■□□□□ 0.86
TRAM1-201ENST00000262213 SARM1Q6SZW1 724 aa20.43■□□□□ 0.86
TRAM1-201ENST00000262213 SMARCC2Q8TAQ2 1214 aa20.43■□□□□ 0.86
TRAM1-201ENST00000262213 GCP02774 474 aa20.42■□□□□ 0.86
TRAM1-201ENST00000262213 CCZ1BP86790 482 aa20.42■□□□□ 0.86
TRAM1-201ENST00000262213 CCZ1P86791 482 aaPredicted RBP20.42■□□□□ 0.86
TRAM1-201ENST00000262213 DHX32Q7L7V1 743 aaKnown RBP20.42■□□□□ 0.86
TRAM1-201ENST00000262213 ANO10Q9NW15 660 aa20.42■□□□□ 0.86
TRAM1-201ENST00000262213 LMO7Q8WWI1 1683 aa20.42■□□□□ 0.86
TRAM1-201ENST00000262213 CTAGE5O15320 804 aa20.42■□□□□ 0.86
TRAM1-201ENST00000262213 CEP57L1Q8IYX8 460 aa20.42■□□□□ 0.86
TRAM1-201ENST00000262213 METTL22Q9BUU2 404 aaPredicted RBP20.42■□□□□ 0.86
TRAM1-201ENST00000262213 HEG1Q9ULI3 1381 aa20.42■□□□□ 0.86
TRAM1-201ENST00000262213 BIN1O00499 593 aa20.41■□□□□ 0.86
TRAM1-201ENST00000262213 FAM160A1Q05DH4 1040 aa20.41■□□□□ 0.86
TRAM1-201ENST00000262213 SYCP1Q15431 976 aa20.41■□□□□ 0.86
TRAM1-201ENST00000262213 ELF2Q15723 593 aa20.41■□□□□ 0.86
TRAM1-201ENST00000262213 ZNF790Q6PG37 636 aa20.41■□□□□ 0.86
TRAM1-201ENST00000262213 RAB11FIP4Q86YS3 637 aa20.41■□□□□ 0.86
TRAM1-201ENST00000262213 AXIN2Q9Y2T1 843 aa20.41■□□□□ 0.86
TRAM1-201ENST00000262213 NFAT5O94916 1531 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms