RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 CALM3P0DP25 149 aa17.42■□□□□ 0.38
UBE4B-201ENST00000253251 DNAJC10Q8IXB1 793 aa17.42■□□□□ 0.38
UBE4B-201ENST00000253251 BRF1Q92994 677 aa17.42■□□□□ 0.38
UBE4B-201ENST00000253251 CCDC171Q6TFL3 1326 aa17.42■□□□□ 0.38
UBE4B-201ENST00000253251 ZNF521Q96K83 1311 aa17.42■□□□□ 0.38
UBE4B-201ENST00000253251 ZBTB43O43298 467 aa17.41■□□□□ 0.38
UBE4B-201ENST00000253251 HAND2P61296 217 aa17.41■□□□□ 0.38
UBE4B-201ENST00000253251 PUM3Q15397 648 aaKnown RBP17.41■□□□□ 0.38
UBE4B-201ENST00000253251 TNNI3KQ59H18 835 aa17.41■□□□□ 0.38
UBE4B-201ENST00000253251 DDX17Q92841 729 aaKnown RBP17.41■□□□□ 0.38
UBE4B-201ENST00000253251 ZC3H12CQ9C0D7 883 aaKnown RBP17.41■□□□□ 0.38
UBE4B-201ENST00000253251 FPGT-TNNI3KV9GXZ4 949 aa17.41■□□□□ 0.38
UBE4B-201ENST00000253251 CCT2P78371 535 aaKnown RBP17.41■□□□□ 0.38
UBE4B-201ENST00000253251 ARGLU1Q9NWB6 273 aaPredicted RBP17.41■□□□□ 0.38
UBE4B-201ENST00000253251 E9PCH4 1651 aa17.41■□□□□ 0.38
UBE4B-201ENST00000253251 MAGEB6P1A0A0J9YX57 407 aa17.41■□□□□ 0.38
UBE4B-201ENST00000253251 CAMSAP1Q5T5Y3 1602 aa17.41■□□□□ 0.38
UBE4B-201ENST00000253251 WDR17Q8IZU2 1322 aa17.41■□□□□ 0.38
UBE4B-201ENST00000253251 ADGRL3Q9HAR2 1447 aa17.4■□□□□ 0.38
UBE4B-201ENST00000253251 KLF18A0A0U1RQI7 1052 aa17.4■□□□□ 0.38
UBE4B-201ENST00000253251 CNBD1Q8NA66 436 aa17.4■□□□□ 0.38
UBE4B-201ENST00000253251 INTS4Q96HW7 963 aaKnown RBP17.4■□□□□ 0.38
UBE4B-201ENST00000253251 USP21Q9UK80 565 aa17.4■□□□□ 0.38
UBE4B-201ENST00000253251 TCIRG1Q13488 830 aa17.4■□□□□ 0.38
UBE4B-201ENST00000253251 A1BGP04217 495 aa17.4■□□□□ 0.38
UBE4B-201ENST00000253251 NAP1L1P55209 391 aaKnown RBP17.4■□□□□ 0.38
UBE4B-201ENST00000253251 MED14O60244 1454 aa17.4■□□□□ 0.38
UBE4B-201ENST00000253251 ITGA6P23229 1130 aa17.4■□□□□ 0.38
UBE4B-201ENST00000253251 CT47A1Q5JQC4 288 aaPredicted RBP17.4■□□□□ 0.38
UBE4B-201ENST00000253251 FBXO3Q9UK99 471 aa17.4■□□□□ 0.38
UBE4B-201ENST00000253251 FAM89AQ96GI7 184 aa17.39■□□□□ 0.37
UBE4B-201ENST00000253251 CDC42BPGQ6DT37 1551 aa17.39■□□□□ 0.37
UBE4B-201ENST00000253251 KIF20AO95235 890 aa17.39■□□□□ 0.37
UBE4B-201ENST00000253251 MICU3Q86XE3 530 aa17.39■□□□□ 0.37
UBE4B-201ENST00000253251 ZSCAN22P10073 491 aaPredicted RBP17.39■□□□□ 0.37
UBE4B-201ENST00000253251 RTL9Q8NET4 1388 aa17.39■□□□□ 0.37
UBE4B-201ENST00000253251 WDHD1O75717 1129 aaPredicted RBP17.39■□□□□ 0.37
UBE4B-201ENST00000253251 RBM25P49756 843 aaKnown RBP17.39■□□□□ 0.37
UBE4B-201ENST00000253251 KANK3Q6NY19 840 aa17.39■□□□□ 0.37
UBE4B-201ENST00000253251 SUCLG2Q96I99 432 aa17.39■□□□□ 0.37
UBE4B-201ENST00000253251 ERBB3P21860 1342 aa17.38■□□□□ 0.37
UBE4B-201ENST00000253251 A0A1B0GUL7 405 aa17.38■□□□□ 0.37
UBE4B-201ENST00000253251 BAG4O95429 457 aaKnown RBP17.38■□□□□ 0.37
UBE4B-201ENST00000253251 UBE2HP62256 183 aa17.38■□□□□ 0.37
UBE4B-201ENST00000253251 CCDC148Q8NFR7 591 aa17.38■□□□□ 0.37
UBE4B-201ENST00000253251 NEURL1BA8MQ27 555 aa17.38■□□□□ 0.37
UBE4B-201ENST00000253251 CREB3L3Q68CJ9 461 aa17.38■□□□□ 0.37
UBE4B-201ENST00000253251 MROH5Q6ZUA9 1318 aa17.38■□□□□ 0.37
UBE4B-201ENST00000253251 PIBF1Q8WXW3 757 aa17.38■□□□□ 0.37
UBE4B-201ENST00000253251 USP26Q9BXU7 913 aa17.38■□□□□ 0.37
UBE4B-201ENST00000253251 FAM98CQ17RN3 349 aaKnown RBP17.37■□□□□ 0.37
UBE4B-201ENST00000253251 SSH3Q8TE77 659 aa17.37■□□□□ 0.37
UBE4B-201ENST00000253251 TULP4Q9NRJ4 1543 aa17.37■□□□□ 0.37
UBE4B-201ENST00000253251 TMEM132AQ24JP5 1023 aa17.37■□□□□ 0.37
UBE4B-201ENST00000253251 ZHX3Q9H4I2 956 aa17.37■□□□□ 0.37
UBE4B-201ENST00000253251 ZC3H13Q5T200 1668 aaKnown RBP17.37■□□□□ 0.37
UBE4B-201ENST00000253251 NBPF7P0C2Y1 421 aaPredicted RBP17.37■□□□□ 0.37
UBE4B-201ENST00000253251 SYCP1Q15431 976 aa17.37■□□□□ 0.37
UBE4B-201ENST00000253251 RTN1Q16799 776 aa17.37■□□□□ 0.37
UBE4B-201ENST00000253251 IFIT1BQ5T764 474 aaKnown RBP17.37■□□□□ 0.37
UBE4B-201ENST00000253251 DHX32Q7L7V1 743 aaKnown RBP17.37■□□□□ 0.37
UBE4B-201ENST00000253251 OGFOD1Q8N543 542 aa17.37■□□□□ 0.37
UBE4B-201ENST00000253251 ACBD3Q9H3P7 528 aa17.37■□□□□ 0.37
UBE4B-201ENST00000253251 SSBP05455 408 aaKnown RBP eCLIP17.37■□□□□ 0.37
UBE4B-201ENST00000253251 ZNF853P0CG23 659 aa17.37■□□□□ 0.37
UBE4B-201ENST00000253251 POLD1P28340 1107 aa17.37■□□□□ 0.37
UBE4B-201ENST00000253251 NCAPD2Q15021 1401 aa17.37■□□□□ 0.37
UBE4B-201ENST00000253251 TSPY3P0CV98 308 aa17.36■□□□□ 0.37
UBE4B-201ENST00000253251 TSPY8P0CW00 308 aa17.36■□□□□ 0.37
UBE4B-201ENST00000253251 LPIN2Q92539 896 aa17.36■□□□□ 0.37
UBE4B-201ENST00000253251 CEP152O94986 1710 aa17.36■□□□□ 0.37
UBE4B-201ENST00000253251 DLC1Q96QB1 1528 aa17.36■□□□□ 0.37
UBE4B-201ENST00000253251 SYCE3A1L190 88 aa17.36■□□□□ 0.37
UBE4B-201ENST00000253251 FGFR1OPO95684 399 aaKnown RBP17.36■□□□□ 0.37
UBE4B-201ENST00000253251 LDHBP07195 334 aaKnown RBP17.36■□□□□ 0.37
UBE4B-201ENST00000253251 KLHL40Q2TBA0 621 aa17.36■□□□□ 0.37
UBE4B-201ENST00000253251 PRC1O43663 620 aa17.36■□□□□ 0.37
UBE4B-201ENST00000253251 SLC26A6Q9BXS9 759 aa17.36■□□□□ 0.37
UBE4B-201ENST00000253251 STK32BQ9NY57 414 aa17.36■□□□□ 0.37
UBE4B-201ENST00000253251 NSFL1CQ9UNZ2 370 aaKnown RBP17.36■□□□□ 0.37
UBE4B-201ENST00000253251 RIMBP3CA6NJZ7 1639 aa17.36■□□□□ 0.37
UBE4B-201ENST00000253251 RIMBP3BA6NNM3 1639 aa17.36■□□□□ 0.37
UBE4B-201ENST00000253251 RIMBP3Q9UFD9 1639 aa17.36■□□□□ 0.37
UBE4B-201ENST00000253251 Q6ZUG5 572 aa17.35■□□□□ 0.37
UBE4B-201ENST00000253251 ZNF219Q9P2Y4 722 aaPredicted RBP17.35■□□□□ 0.37
UBE4B-201ENST00000253251 ABCA6Q8N139 1617 aa17.35■□□□□ 0.37
UBE4B-201ENST00000253251 GUCY1B3Q02153 619 aa17.35■□□□□ 0.37
UBE4B-201ENST00000253251 ODF2Q5BJF6 829 aa17.35■□□□□ 0.37
UBE4B-201ENST00000253251 FSIP1Q8NA03 581 aa17.35■□□□□ 0.37
UBE4B-201ENST00000253251 LRRC27Q9C0I9 530 aa17.35■□□□□ 0.37
UBE4B-201ENST00000253251 TCP11L1Q9NUJ3 509 aa17.35■□□□□ 0.37
UBE4B-201ENST00000253251 AMPD3Q01432 767 aa17.34■□□□□ 0.37
UBE4B-201ENST00000253251 FLAD1Q8NFF5 587 aa17.34■□□□□ 0.37
UBE4B-201ENST00000253251 KCNG4Q8TDN1 519 aa17.34■□□□□ 0.37
UBE4B-201ENST00000253251 APPBP2Q92624 585 aa17.34■□□□□ 0.37
UBE4B-201ENST00000253251 USP44Q9H0E7 712 aa17.34■□□□□ 0.37
UBE4B-201ENST00000253251 USP31Q70CQ4 1352 aa17.34■□□□□ 0.37
UBE4B-201ENST00000253251 PPP1R12BO60237 982 aaPredicted RBP17.34■□□□□ 0.37
UBE4B-201ENST00000253251 CCDC82Q8N4S0 544 aa17.34■□□□□ 0.37
UBE4B-201ENST00000253251 RUFY3Q7L099 469 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms