RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 MPDZO75970 2070 aa9.4□□□□□ -0.9
SMAD4-214ENST00000592186 ZGRF1Q86YA3 2104 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 CIB4A0PJX0 185 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 SH3D21A4FU49 640 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 WIPF3A6NGB9 483 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 SLC22A31A6NKX4 558 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 C16orf97H3BN30 126 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 H7C1C5 153 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 AGFG2O95081 481 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 FARS2O95363 451 aaKnown RBP9.39□□□□□ -0.91
SMAD4-214ENST00000592186 CLDN14O95500 239 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 HRGP04196 525 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 LYNP07948 512 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 OR8G3PP0DMU2 310 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 CTLA4P16410 223 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 SPI1P17947 270 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 PSMB1P20618 241 aaKnown RBP9.39□□□□□ -0.91
SMAD4-214ENST00000592186 LAP3P28838 519 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 FMO3P31513 532 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 CD79BP40259 229 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 ISL1P61371 349 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 LCN6P62502 163 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 IL5RAQ01344 420 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 CBX3Q13185 183 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 CEACAM16Q2WEN9 425 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 PHYHD1Q5SRE7 291 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 SFRP5Q5T4F7 317 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 C6orf52Q5T4I8 152 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 AADACL4Q5VUY2 407 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 ZNF474Q6S9Z5 364 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-214ENST00000592186 NCCRP1Q6ZVX7 275 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-214ENST00000592186 USP51Q70EK9 711 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 MEPCEQ7L2J0 689 aaKnown RBP9.39□□□□□ -0.91
SMAD4-214ENST00000592186 THAP5Q7Z6K1 395 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 LUZP2Q86TE4 346 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 CROCCP3Q8IVE0 287 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 WDFY1Q8IWB7 410 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 C17orf78Q8N4C9 275 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 PROKR2Q8NFJ6 384 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 ITLN2Q8WWU7 325 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-214ENST00000592186 NSMAFQ92636 917 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 KISS1RQ969F8 398 aaPredicted RBP9.39□□□□□ -0.91
SMAD4-214ENST00000592186 ITPKCQ96DU7 683 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 TEAD3Q99594 435 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 ANKRD60Q9BZ19 345 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 KCNN2Q9H2S1 579 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 RERGLQ9H628 205 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 SEC61A2Q9H9S3 476 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 SIAEQ9HAT2 523 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 MOV10Q9HCE1 1003 aaKnown RBP9.39□□□□□ -0.91
SMAD4-214ENST00000592186 HINT3Q9NQE9 182 aaKnown RBP9.39□□□□□ -0.91
SMAD4-214ENST00000592186 ZNF226Q9NYT6 803 aa9.39□□□□□ -0.91
SMAD4-214ENST00000592186 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMAD4-214ENST00000592186 PHF3Q92576 2039 aaKnown RBP9.38□□□□□ -0.91
SMAD4-214ENST00000592186 RP1L1Q8IWN7 2480 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-214ENST00000592186 IGLV1-36A0A0B4J1U3 117 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 FAM183AA6NL82 134 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 DENRO43583 198 aaKnown RBP9.38□□□□□ -0.91
SMAD4-214ENST00000592186 ZG16O60844 167 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 TMCC2O75069 709 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 GLCEO94923 617 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 PPP3CBP16298 524 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 ZNF823P16415 610 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 COX5AP20674 150 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 IGHV1-2P23083 117 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 MYF6P23409 242 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 EDNRAP25101 427 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 LSM6P62312 80 aaKnown RBP9.38□□□□□ -0.91
SMAD4-214ENST00000592186 ARF1P84077 181 aaKnown RBP9.38□□□□□ -0.91
SMAD4-214ENST00000592186 HSF2Q03933 536 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 FMODQ06828 376 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 MAD2L1BPQ15013 274 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-214ENST00000592186 KCNMB1Q16558 191 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 KLHL12Q53G59 568 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 LCN1P1Q5VSP4 162 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 FAM27BQ5VT28 67 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 FOXL2NBQ6ZUU3 175 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 LINGO2Q7L985 606 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.38□□□□□ -0.91
SMAD4-214ENST00000592186 CXorf67Q86X51 503 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-214ENST00000592186 ENTHD1Q8IYW4 607 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 ZNF433Q8N7K0 673 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-214ENST00000592186 RELL2Q8NC24 303 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-214ENST00000592186 RNASE6Q93091 150 aaKnown RBP9.38□□□□□ -0.91
SMAD4-214ENST00000592186 UBE2FQ969M7 185 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 ALKBH3Q96Q83 286 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-214ENST00000592186 FOXB1Q99853 325 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 OR51V1Q9H2C8 321 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 NELFAQ9H3P2 528 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 OBP2BQ9NPH6 170 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 RASSF1Q9NS23 344 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 TMEM38BQ9NVV0 291 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 HAO2Q9NYQ3 351 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 WARS2Q9UGM6 360 aaKnown RBP9.38□□□□□ -0.91
SMAD4-214ENST00000592186 KCNG2Q9UJ96 466 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 COA3Q9Y2R0 106 aaPredicted RBP9.38□□□□□ -0.91
SMAD4-214ENST00000592186 ZNF462Q96JM2 2506 aa9.38□□□□□ -0.91
SMAD4-214ENST00000592186 SPENQ96T58 3664 aaKnown RBP9.37□□□□□ -0.91
SMAD4-214ENST00000592186 KIAA1549Q9HCM3 1950 aa9.37□□□□□ -0.91
SMAD4-214ENST00000592186 C12orf71A8MTZ7 269 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms