RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 OR10G4Q8NGN3 311 aa3.35□□□□□ -1.87
LINC00557-201ENST00000563184 OR4S2Q8NH73 311 aa3.35□□□□□ -1.87
LINC00557-201ENST00000563184 CXorf40AQ8TE69 158 aa3.35□□□□□ -1.87
LINC00557-201ENST00000563184 EXOSC8Q96B26 276 aaKnown RBP3.35□□□□□ -1.87
LINC00557-201ENST00000563184 STARD4Q96DR4 205 aa3.35□□□□□ -1.87
LINC00557-201ENST00000563184 PKNOX2Q96KN3 472 aa3.35□□□□□ -1.87
LINC00557-201ENST00000563184 DOCK9Q9BZ29 2069 aa3.35□□□□□ -1.87
LINC00557-201ENST00000563184 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.35□□□□□ -1.87
LINC00557-201ENST00000563184 ZNF816-ZNF321PA0A0X1KG74 233 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 INS-IGF2F8WCM5 200 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 RAB29O14966 203 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 DFNA5O60443 496 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 ZNF324O75467 553 aaPredicted RBP3.34□□□□□ -1.87
LINC00557-201ENST00000563184 PRPS2P11908 318 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 MNAT1P51948 309 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 LINC00315P59091 139 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 PFN3P60673 137 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 ECH1Q13011 328 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 CLINT1Q14677 625 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 PPP1R7Q15435 360 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 LY6G6FQ5SQ64 297 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 TEX43Q6ZNM6 134 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 FAM92BQ6ZTR7 304 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 CYB561D1Q8N8Q1 229 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 ELMO1Q92556 727 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 FAM3DQ96BQ1 224 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 SLC29A1Q99808 456 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 CCDC77Q9BR77 488 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 CENPKQ9BS16 269 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 OR51M1Q9H341 326 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 ANKRA2Q9H9E1 313 aa3.34□□□□□ -1.87
LINC00557-201ENST00000563184 NUP214P35658 2090 aaPredicted RBP3.33□□□□□ -1.88
LINC00557-201ENST00000563184 IGKV2D-24A0A075B6R9 120 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 IGHV5-51A0A0C4DH38 117 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 A0A1B0GVX0 72 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 OR2AG2A6NM03 316 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 CDC7O00311 574 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 MAGEB4O15481 346 aaPredicted RBP3.33□□□□□ -1.88
LINC00557-201ENST00000563184 AIREO43918 545 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 DPM1O60762 260 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 CIB2O75838 187 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 PABPC4LP0CB38 370 aaKnown RBP3.33□□□□□ -1.88
LINC00557-201ENST00000563184 GDI1P31150 447 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 CYB561P49447 251 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 TMED10P49755 219 aaKnown RBP3.33□□□□□ -1.88
LINC00557-201ENST00000563184 CDH6P55285 790 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 KRTAP10-8P60410 259 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 SLC25A11Q02978 314 aaKnown RBP3.33□□□□□ -1.88
LINC00557-201ENST00000563184 SLAQ13239 276 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 ZSCAN26Q16670 478 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 HES5Q5TA89 166 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 PRAMEF20Q5VT98 475 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 SLC8B1Q6J4K2 584 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 ABHD13Q7L211 337 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 GTPBP8Q8N3Z3 284 aaPredicted RBP3.33□□□□□ -1.88
LINC00557-201ENST00000563184 LIX1Q8N485 282 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 OR7G2Q8NG99 324 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 OR56B2PQ8NGI1 322 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 LKAAEAR1Q8TD35 194 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 ACMSDQ8TDX5 336 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 CCDC126Q96EE4 140 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 OR2A5Q96R48 311 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 MYCBPQ99417 103 aaPredicted RBP3.33□□□□□ -1.88
LINC00557-201ENST00000563184 RPP21Q9H633 154 aaKnown RBP3.33□□□□□ -1.88
LINC00557-201ENST00000563184 NMRK1Q9NWW6 199 aa3.33□□□□□ -1.88
LINC00557-201ENST00000563184 ZNF629Q9UEG4 869 aaPredicted RBP3.33□□□□□ -1.88
LINC00557-201ENST00000563184 TRIM64CA6NLI5 447 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 RNF13O43567 381 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 SPAG7O75391 227 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 SRP72O76094 671 aaKnown RBP3.32□□□□□ -1.88
LINC00557-201ENST00000563184 CALM1P0DP23 149 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 CALM2P0DP24 149 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 CALM3P0DP25 149 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 MAS1LP35410 378 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 NAA10P41227 235 aaPredicted RBP3.32□□□□□ -1.88
LINC00557-201ENST00000563184 CDKN2BP42772 138 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 MXD1Q05195 221 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 SRSF5Q13243 272 aaKnown RBP3.32□□□□□ -1.88
LINC00557-201ENST00000563184 PRPSAP1Q14558 356 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 MRPL23Q16540 153 aaKnown RBP3.32□□□□□ -1.88
LINC00557-201ENST00000563184 ARMC12Q5T9G4 340 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 ANKRD22Q5VYY1 191 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 HDDC2Q7Z4H3 204 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 ZNF502Q8TBZ5 544 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 SLC7A13Q8TCU3 470 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 TSNARE1Q96NA8 513 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 SERPINB12Q96P63 405 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 KCNJ16Q9NPI9 418 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 ST3GAL6Q9Y274 331 aa3.32□□□□□ -1.88
LINC00557-201ENST00000563184 USP47Q96K76 1375 aa3.31□□□□□ -1.88
LINC00557-201ENST00000563184 GLYATL1P3A0A0U1RQE8 302 aa3.31□□□□□ -1.88
LINC00557-201ENST00000563184 CCDC169A6NNP5 214 aa3.31□□□□□ -1.88
LINC00557-201ENST00000563184 CLOCKO15516 846 aa3.31□□□□□ -1.88
LINC00557-201ENST00000563184 WISP3O95389 354 aaPredicted RBP3.31□□□□□ -1.88
LINC00557-201ENST00000563184 FABP3P05413 133 aa3.31□□□□□ -1.88
LINC00557-201ENST00000563184 ANXA5P08758 320 aa3.31□□□□□ -1.88
LINC00557-201ENST00000563184 TROVE2P10155 538 aaKnown RBP eCLIP3.31□□□□□ -1.88
LINC00557-201ENST00000563184 ZNF250P15622 560 aa3.31□□□□□ -1.88
LINC00557-201ENST00000563184 IGFBP3P17936 291 aaPredicted RBP3.31□□□□□ -1.88
LINC00557-201ENST00000563184 ZNF138P52744 262 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms