RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 A0A0G2JMP0 313 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 A0A0X1KG70 313 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 CLDN25C9JDP6 229 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 PLPP2O43688 288 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 OR7A10O76100 309 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 AVPP01185 164 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 IGHV3-13P01766 116 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 EPHA1P21709 976 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 STOMP27105 288 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 AQP2P41181 271 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 RBM34P42696 430 aaKnown RBP12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 ZNF81P51508 661 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 ZNF133P52736 654 aaPredicted RBP12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 CRYBA2P53672 197 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 TAS2R41P59536 307 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 MRPS34P82930 218 aaKnown RBP12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 HFEQ30201 348 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 PABPC1L2AQ5JQF8 200 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 C10orf128Q5T292 105 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 C1orf229Q6ZS94 237 aaPredicted RBP12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 USP43Q70EL4 1123 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 NKAIN4Q8IVV8 208 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 OR4M2Q8NGB6 313 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 PFN4Q8NHR9 129 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 GTF3AQ92664 365 aaKnown RBP12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 RAB1CQ92928 201 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 SGTBQ96EQ0 304 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 TIMD4Q96H15 378 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 PLA2G12AQ9BZM1 189 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 SAP30LQ9HAJ7 183 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 INTS9Q9NV88 658 aaKnown RBP12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 STX18Q9P2W9 335 aaKnown RBP12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 EIF3KQ9UBQ5 218 aaKnown RBP12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 WIPI2Q9Y4P8 454 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 CACNG2Q9Y698 323 aa12.89□□□□□ -0.35
CSNK1E-208ENST00000431611 TRIM77I1YAP6 450 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 DEAF1O75398 565 aaPredicted RBP12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 SLC2A10O95528 541 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 ZNF32P17041 273 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 TNFRSF1BP20333 461 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 GCH1P30793 250 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 CDAP32320 146 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 GZMMP51124 257 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 HILS1P60008 231 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 ZNF718Q3SXZ3 478 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 TTMPQ5BVD1 217 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 ARMC4Q5T2S8 1044 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 MOSPD2Q8NHP6 518 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 FAM216AQ8WUB2 273 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 TMEM255BQ8WV15 326 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 TMEM239Q8WW34 195 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 GCDHQ92947 438 aaPredicted RBP12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 ELMOD3Q96FG2 381 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 JMJD8Q96S16 334 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 TMPRSS13Q9BYE2 586 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 SMURF2Q9HAU4 748 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 C20orf141Q9NUB4 165 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 RIMS3Q9UJD0 308 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 BAG5Q9UL15 447 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 UGT2A1Q9Y4X1 527 aa12.88□□□□□ -0.35
CSNK1E-208ENST00000431611 C5orf49A4QMS7 147 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 J3QLI3 93 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 SPRY3O43610 288 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 OR5F1O95221 314 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 IGF2P01344 180 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 IGHV2-5P01817 119 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 COMPP49747 757 aaPredicted RBP12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 GDI2P50395 445 aaKnown RBP12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 CD47Q08722 323 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 PIN1Q13526 163 aaPredicted RBP12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 CYLC2Q14093 348 aaPredicted RBP12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 LAPTM4AQ15012 233 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 SGCAQ16586 387 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 FAM209AQ5JX71 171 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 SPATA46Q5T0L3 261 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 THEM4Q5T1C6 240 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 NANOGP8Q6NSW7 305 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 UNQ6126/PRO20091Q6UXV3 157 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 C1QL2Q7Z5L3 287 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 PEG10Q86TG7 708 aaKnown RBP12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 ZNF101Q8IZC7 436 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 LIPHQ8WWY8 451 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 CCL17Q92583 94 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 NSMAFQ92636 917 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 HDAC2Q92769 488 aaKnown RBP12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 NABP1Q96AH0 204 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 NMD3Q96D46 503 aaKnown RBP12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 POM121L2Q96KW2 1035 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 SH3GL1Q99961 368 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 POLR2J2Q9GZM3 115 aaKnown RBP12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 POLR2J3Q9H1A7 115 aaKnown RBP12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 MED31Q9Y3C7 131 aa12.87□□□□□ -0.35
CSNK1E-208ENST00000431611 LOC100509620A0A075B734 347 aa12.86□□□□□ -0.35
CSNK1E-208ENST00000431611 IGKV1D-43A0A0B4J1Z2 117 aa12.86□□□□□ -0.35
CSNK1E-208ENST00000431611 PLSCR5A0PG75 271 aa12.86□□□□□ -0.35
CSNK1E-208ENST00000431611 TMEM89A2RUT3 159 aa12.86□□□□□ -0.35
CSNK1E-208ENST00000431611 NPIPB13A6NJU9 1138 aa12.86□□□□□ -0.35
CSNK1E-208ENST00000431611 NPIPB4C9JG80 1138 aa12.86□□□□□ -0.35
CSNK1E-208ENST00000431611 SHOX2O60902 331 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-208ENST00000431611 IGHV1-46P01743 117 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 240.9 ms