RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 GDF6Q6KF10 455 aaPredicted RBP8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 MED27Q6P2C8 311 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 ZFAND4Q86XD8 727 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 TMEM156Q8N614 296 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 C12orf76Q8N812 135 aaPredicted RBP8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 FAM46AQ96IP4 442 aaKnown RBP8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 SLC12A9Q9BXP2 914 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 CSTL1Q9H114 145 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 PITPNC1Q9UKF7 332 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 FBXO4Q9UKT5 387 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 PYCARD-AS1I3L0S3 204 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 CTSOP43234 321 aaPredicted RBP8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 MTNR1AP48039 350 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 FABP5Q01469 135 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 LASP1Q14847 261 aaKnown RBP8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 ABCA11PQ4W5N1 156 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 CST9Q5W186 159 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 RPUSD3Q6P087 351 aaKnown RBP8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 ZNF573Q86YE8 665 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 CYB561A3Q8NBI2 242 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 THEM6Q8WUY1 208 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 WRAP53Q9BUR4 548 aaKnown RBP8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 HHATLQ9HCP6 504 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 PRODH2Q9UF12 536 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 TBC1D29Q9UFV1 150 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 IL36AQ9UHA7 158 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 FZD10Q9ULW2 581 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 OSGIN2Q9Y236 505 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 QSOX1O00391 747 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 ST8SIA3O43173 380 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 ACP2P11117 423 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 ACKR3P25106 362 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 TPPP2P59282 170 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 SNAI3Q3KNW1 292 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 ZNF429Q86V71 674 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 KLHDC1Q8N7A1 406 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 NUDCD2Q8WVJ2 157 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 GEMIN6Q8WXD5 167 aaKnown RBP8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 SLC25A28Q96A46 364 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 OR5B2Q96R09 309 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 ATP5SQ99766 215 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 HSD17B14Q9BPX1 270 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 GINS3Q9BRX5 216 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 OBP2BQ9NPH6 170 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 OBP2AQ9NY56 170 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 ZNF70Q9UC06 446 aaPredicted RBP8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 A0A1B0GUH1 482 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 C22orf31O95567 290 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 EOMESO95936 686 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 HPRT1P00492 218 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 PSG1P11464 419 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 NPY1RP25929 384 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 WNT5AP41221 380 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 RBM11P57052 281 aaKnown RBP8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 CACNG1Q06432 222 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 SPIN3Q5JUX0 258 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 DPY19L2P2Q6ZN68 376 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 SNIP1Q8TAD8 396 aaKnown RBP8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 GPBAR1Q8TDU6 330 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 ORAI1Q96D31 301 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 CDCA3Q99618 268 aaPredicted RBP8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 SLC5A7Q9GZV3 580 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 OR2D2Q9H210 308 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 RLIMQ9NVW2 624 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 CKLFQ9UBR5 152 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 KLK11Q9UBX7 282 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 RAB22AQ9UL26 194 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.27□□□□□ -1.08
GTF2A1-203ENST00000553612 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.27□□□□□ -1.08
GTF2A1-203ENST00000553612 C4orf47A7E2U8 309 aa8.27□□□□□ -1.08
GTF2A1-203ENST00000553612 AKAIN1P0CW23 69 aa8.27□□□□□ -1.08
GTF2A1-203ENST00000553612 PRPH2P23942 346 aa8.27□□□□□ -1.08
GTF2A1-203ENST00000553612 NSG1P42857 185 aa8.27□□□□□ -1.08
GTF2A1-203ENST00000553612 ID4P47928 161 aa8.27□□□□□ -1.08
GTF2A1-203ENST00000553612 CSNK1A1P48729 337 aa8.27□□□□□ -1.08
GTF2A1-203ENST00000553612 SPATA45Q537H7 98 aa8.27□□□□□ -1.08
GTF2A1-203ENST00000553612 ZNF101Q8IZC7 436 aa8.27□□□□□ -1.08
GTF2A1-203ENST00000553612 STARD4Q96DR4 205 aa8.27□□□□□ -1.08
GTF2A1-203ENST00000553612 ST6GALNAC4Q9H4F1 302 aa8.27□□□□□ -1.08
GTF2A1-203ENST00000553612 HEXA-AS1Q9H8Q6 139 aa8.27□□□□□ -1.08
GTF2A1-203ENST00000553612 ZNF541Q9H0D2 1346 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 HSD3B2P26439 372 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 DCTDP32321 178 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 PNLIPRP2P54317 469 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 GABRA6Q16445 453 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 LY6KQ17RY6 165 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 GLYR1Q49A26 553 aaPredicted RBP8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 IER5LQ5T953 404 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 UNQ5815/PRO19632Q6UWF5 114 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 SLC35D2Q76EJ3 337 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 CMTM7Q96FZ5 175 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 PBX4Q9BYU1 374 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 ZNF281Q9Y2X9 895 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 MANBAO00462 879 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 MAN2B1O00754 1011 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 STK16O75716 305 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 STK17BO94768 372 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 SLC25A27O95847 323 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 GCGP01275 180 aa8.27□□□□□ -1.09
GTF2A1-203ENST00000553612 OPN1MWP04001 364 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms