RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 WNT5AP41221 380 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 UCP2P55851 309 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 RPS23P62266 143 aaKnown RBP9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 FMODQ06828 376 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 RPL18Q07020 188 aaKnown RBP9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 RBBP4Q09028 425 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 LAPTM4AQ15012 233 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 TSTQ16762 297 aaKnown RBP9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 NKPD1Q17RQ9 610 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 FAHD2BQ6P2I3 314 aaPredicted RBP9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 ZNF101Q8IZC7 436 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 CLDN22Q8N7P3 220 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 ICA1LQ8NDH6 482 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 SYNPRQ8TBG9 265 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 ASB10Q8WXI3 467 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 FAHD2AQ96GK7 314 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 PCDHAC1Q9H158 963 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 DENND2DQ9H6A0 471 aaPredicted RBP9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 RNF121Q9H920 327 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 HINT3Q9NQE9 182 aaKnown RBP9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 G6PC2Q9NQR9 355 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 LEF1Q9UJU2 399 aaPredicted RBP9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 ZNF229Q9UJW7 825 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 TRIM33Q9UPN9 1127 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 CORO2BQ9UQ03 480 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 NDUFAF1Q9Y375 327 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 UGT2A1Q9Y4X1 527 aa9.84□□□□□ -0.83
PRPF40B-212ENST00000551111 LOC100509620A0A075B734 347 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 PLPP2O43688 288 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 BCL10O95999 233 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 TFP02787 698 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 PCGF2P35227 344 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 MPV17P39210 176 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 KLF3P57682 345 aaPredicted RBP9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 RABL3Q5HYI8 236 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 PABPC1L2AQ5JQF8 200 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 SPATA46Q5T0L3 261 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 SLC16A14Q7RTX9 510 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 SNX32Q86XE0 403 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 AKR7LQ8NHP1 331 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 TMEM255BQ8WV15 326 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 HDAC2Q92769 488 aaKnown RBP9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 NABP1Q96AH0 204 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 NMD3Q96D46 503 aaKnown RBP9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 SEPHS2Q99611 448 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 TMPRSS13Q9BYE2 586 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 ZNF665Q9H7R5 613 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 NANOGQ9H9S0 305 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 CDH20Q9HBT6 801 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 DCAF16Q9NXF7 216 aa9.83□□□□□ -0.84
PRPF40B-212ENST00000551111 PIP5K1CO60331 668 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 MPZL1O95297 269 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 SNAP29O95721 258 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 IGHG1P01857 330 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 HIST1H2ABP04908 130 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 ACADSP16219 412 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 ZNF32P17041 273 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 MAKP20794 623 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 CCNOP22674 350 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 OR1E2P47887 323 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 CLRN1P58418 232 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 MRPS11P82912 194 aaKnown RBP9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 PIN1Q13526 163 aaPredicted RBP9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 NFYCQ13952 458 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 VMACQ2NL98 169 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 THEM4Q5T1C6 240 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 ARMC4Q5T2S8 1044 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 NANOGP8Q6NSW7 305 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 TMEM53Q6P2H8 277 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 TMEM154Q6P9G4 183 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 C12orf54Q6X4T0 127 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 USP51Q70EK9 711 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 HIST3H2AQ7L7L0 130 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 NANOGNBQ7Z5D8 188 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 RBM15BQ8NDT2 890 aaKnown RBP9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 NOXO1Q8NFA2 376 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 OR1J1Q8NGS3 322 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 OR51F2Q8NH61 342 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 ZNF519Q8TB69 540 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 C11orf40Q8WZ69 217 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 NSMAFQ92636 917 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 HIST1H2ACQ93077 130 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 ATP6V1G3Q96LB4 118 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 EVA1AQ9H8M9 152 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 ESM1Q9NQ30 184 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 GMPR2Q9P2T1 348 aaKnown RBP9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 ZNF346Q9UL40 294 aaKnown RBP9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 SH3GLB1Q9Y371 365 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 WIPI2Q9Y4P8 454 aa9.82□□□□□ -0.84
PRPF40B-212ENST00000551111 IGHV1-69-2A0A0G2JMI3 117 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 ZSCAN5BA6NJL1 495 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 FXYD1O00168 92 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 ANGPT2O15123 496 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 OR7A10O76100 309 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 FARS2O95363 451 aaKnown RBP9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 PNPP00491 289 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 NGFP01138 241 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 IGHV1-46P01743 117 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 IGHV3-13P01766 116 aa9.81□□□□□ -0.84
PRPF40B-212ENST00000551111 IGHV2-5P01817 119 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms