RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ALPK2Q86TB3 2170 aa17.11■□□□□ 0.33
USP39-218ENST00000493829 CCDC182A6NF36 153 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 XPNPEP2O43895 674 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 BMP5P22003 454 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 SLC2A5P22732 501 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 SLC25A1P53007 311 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 ROR2Q01974 943 aaKnown RBP17.1■□□□□ 0.33
USP39-218ENST00000493829 FAPQ12884 760 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 OCLNQ16625 522 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 HIST3H3Q16695 136 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 THEM4Q5T1C6 240 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 RIPPLY2Q5TAB7 128 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 GID4Q8IVV7 300 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 BPIFB6Q8NFQ5 453 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 FBLIM1Q8WUP2 373 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 STARD4Q96DR4 205 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 ZFP3Q96NJ6 502 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 RBM24Q9BX46 236 aaKnown RBP17.1■□□□□ 0.33
USP39-218ENST00000493829 B3GAT2Q9NPZ5 323 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 PROCRQ9UNN8 238 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 B9D1Q9UPM9 204 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 COA3Q9Y2R0 106 aaPredicted RBP17.1■□□□□ 0.33
USP39-218ENST00000493829 IGLV1-36A0A0B4J1U3 117 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 TVP23AA6NH52 213 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 FAM20BO75063 409 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 HLA-DQA2P01906 255 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 MRPL3P09001 348 aaKnown RBP17.1■□□□□ 0.33
USP39-218ENST00000493829 CTSSP25774 331 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 CDAP32320 146 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 DNM1P34Q6PK57 102 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 SHFQ7M4L6 423 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 ATCAYQ86WG3 371 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 RND1Q92730 232 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 Q96MT0 163 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 SFXN3Q9BWM7 321 aa17.1■□□□□ 0.33
USP39-218ENST00000493829 CENPBD1B2RD01 187 aa17.09■□□□□ 0.33
USP39-218ENST00000493829 ZNF587BE7ETH6 402 aa17.09■□□□□ 0.33
USP39-218ENST00000493829 PYCARD-AS1I3L0S3 204 aa17.09■□□□□ 0.33
USP39-218ENST00000493829 PRODHO43272 600 aa17.09■□□□□ 0.33
USP39-218ENST00000493829 KHDRBS3O75525 346 aaKnown RBP17.09■□□□□ 0.33
USP39-218ENST00000493829 NR2C1P13056 603 aa17.09■□□□□ 0.33
USP39-218ENST00000493829 CRABP1P29762 137 aa17.09■□□□□ 0.33
USP39-218ENST00000493829 FOXG1P55316 489 aaPredicted RBP17.09■□□□□ 0.33
USP39-218ENST00000493829 ZNF91Q05481 1191 aa17.09■□□□□ 0.33
USP39-218ENST00000493829 CEACAM16Q2WEN9 425 aa17.09■□□□□ 0.33
USP39-218ENST00000493829 C6orf141Q5SZD1 244 aa17.09■□□□□ 0.33
USP39-218ENST00000493829 MEDAGQ5VYS4 303 aa17.09■□□□□ 0.33
USP39-218ENST00000493829 SLC25A47Q6Q0C1 308 aa17.09■□□□□ 0.33
USP39-218ENST00000493829 MEPCEQ7L2J0 689 aaKnown RBP17.09■□□□□ 0.33
USP39-218ENST00000493829 KISS1RQ969F8 398 aaPredicted RBP17.09■□□□□ 0.33
USP39-218ENST00000493829 SEC61A2Q9H9S3 476 aa17.09■□□□□ 0.33
USP39-218ENST00000493829 GPR35Q9HC97 309 aa17.09■□□□□ 0.33
USP39-218ENST00000493829 FKBP7Q9Y680 259 aa17.09■□□□□ 0.33
USP39-218ENST00000493829 HSPB2A8KAH6 182 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 EEF1E1-BLOC1S5C9J1V9 151 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 SLC1A7O00341 560 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 LRRTM2O43300 516 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 EEF1E1O43324 174 aaKnown RBP17.08■□□□□ 0.32
USP39-218ENST00000493829 AHCYL1O43865 530 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 MPZL1O95297 269 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 CRHP06850 196 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 GSTT1P30711 240 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 HSPB2Q16082 182 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 MEP1BQ16820 701 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 TMEM211Q6ICI0 200 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 LUZP2Q86TE4 346 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 ZBTB46Q86UZ6 589 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 POMGNT2Q8NAT1 580 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 ZNF511Q8NB15 262 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 SMAP2Q8WU79 429 aaPredicted RBP17.08■□□□□ 0.32
USP39-218ENST00000493829 RFKQ969G6 155 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 RNFT2Q96EX2 444 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 LINC00470Q9BZP3 86 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 RACGAP1Q9H0H5 632 aa17.08■□□□□ 0.32
USP39-218ENST00000493829 SH3D21A4FU49 640 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 DHHO43323 396 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 DBTP11182 482 aaKnown RBP17.07■□□□□ 0.32
USP39-218ENST00000493829 HTR1FP30939 366 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 NAA10P41227 235 aaPredicted RBP17.07■□□□□ 0.32
USP39-218ENST00000493829 SLC25A30Q5SVS4 291 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 LCN1P1Q5VSP4 162 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 FBXW9Q5XUX1 488 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 ZNF610Q8N9Z0 462 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 FNDC8Q8TC99 324 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 UGT2A1Q9Y4X1 527 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 NBASA2RRP1 2371 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 OR6C65A6NJZ3 312 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 SLC22A31A6NKX4 558 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 SELENOFO60613 162 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 GLCEO94923 617 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 CGAP01215 116 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 ZNF84P51523 738 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 LINC01590Q5TEZ4 76 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 LIX1LQ8IVB5 337 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 OR51G2Q8NGK0 314 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 TEAD3Q99594 435 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 EMC7Q9NPA0 242 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 MALT1Q9UDY8 824 aa17.07■□□□□ 0.32
USP39-218ENST00000493829 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.07■□□□□ 0.32
USP39-218ENST00000493829 FREM1Q5H8C1 2179 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms