RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 OAFQ86UD1 273 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 ZNF683Q8IZ20 524 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 SLC38A6Q8IZM9 456 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 ZNF557Q8N988 423 aaPredicted RBP0.7□□□□□ -2.3
CCDC93-209ENST00000488908 FAM133AQ8N9E0 248 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 APCDD1LQ8NCL9 501 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 OR1P1Q8NH06 330 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 TRMT10AQ8TBZ6 339 aaKnown RBP0.7□□□□□ -2.3
CCDC93-209ENST00000488908 C15orf40Q8WUR7 153 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 C17orf50Q8WW18 174 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 OSTF1Q92882 214 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 SORT1Q99523 831 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 ZSCAN5AQ9BUG6 496 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 LRRN3Q9H3W5 708 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 C1orf198Q9H425 327 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 RWDD1Q9H446 243 aaPredicted RBP0.7□□□□□ -2.3
CCDC93-209ENST00000488908 GORASP2Q9H8Y8 452 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 PALMDQ9NP74 551 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 UFSP2Q9NUQ7 469 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 KLHL28Q9NXS3 571 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 PIPOXQ9P0Z9 390 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 RNF14Q9UBS8 474 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 PSG8Q9UQ74 426 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 POLDIP2Q9Y2S7 368 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 KCNIP3Q9Y2W7 256 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 PNPLA6Q8IY17 1366 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 KIF16BQ96L93 1317 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 KMT2BQ9UMN6 2715 aaPredicted RBP0.69□□□□□ -2.3
CCDC93-209ENST00000488908 SEC16AO15027 2179 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 A0A0U1RQV1 116 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 CENPVL3A0A0U1RRI6 287 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 A0A1B0GW55 424 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 K7EM74 188 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 LGALS9O00182 355 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 PRKAB2O43741 272 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 RAMP3O60896 148 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 RHOBTB1O94844 696 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 UBTFL6P0CB48 400 aaPredicted RBP0.69□□□□□ -2.3
CCDC93-209ENST00000488908 DUX4L2P0CJ85 424 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 DUX4L3P0CJ86 424 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 DUX4L5P0CJ88 424 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 DUX4L6P0CJ89 424 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 DUX4L7P0CJ90 424 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 LAP3P28838 519 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 CCR1P32246 355 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 CA8P35219 290 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 SERPINB5P36952 375 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 FDFT1P37268 417 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 OPRD1P41143 372 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 AQP2P41181 271 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 CDKN2BP42772 138 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 SSR1P43307 286 aaKnown RBP0.69□□□□□ -2.3
CCDC93-209ENST00000488908 YAP1P46937 504 aaKnown RBP0.69□□□□□ -2.3
CCDC93-209ENST00000488908 DGUOKQ16854 277 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 FILIP1LQ4L180 1135 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 C10orf120Q5SQS8 335 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 TRIM40Q6P9F5 258 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 SASS6Q6UVJ0 657 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 CASP12Q6UXS9 341 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 TEX43Q6ZNM6 134 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 NCCRP1Q6ZVX7 275 aaPredicted RBP0.69□□□□□ -2.3
CCDC93-209ENST00000488908 ZNF619Q8N2I2 560 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 ZNF664Q8N3J9 261 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 ST20-AS1Q8NBB2 130 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 C1orf64Q8NEQ6 169 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 OR13G1Q8NGZ3 307 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 HSFY1Q96LI6 401 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 ZNF681Q96N22 645 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 TTC25Q96NG3 672 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 P2RX4Q99571 388 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 TBL1YQ9BQ87 522 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 MFFQ9GZY8 342 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 LHX5Q9H2C1 402 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 POLE3Q9NRF9 147 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.69□□□□□ -2.3
CCDC93-209ENST00000488908 UVRAGQ9P2Y5 699 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 DUX4Q9UBX2 424 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 KIAA1257Q9ULG3 409 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 IKBKGQ9Y6K9 419 aa0.69□□□□□ -2.3
CCDC93-209ENST00000488908 TENM3Q9P273 2699 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 IGLV3-22A0A075B6J6 115 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 IGHV3OR16-8A0A075B7F1 116 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 MBLAC1A4D2B0 266 aaPredicted RBP0.68□□□□□ -2.3
CCDC93-209ENST00000488908 ZNF98A6NK75 572 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 ZNF726A6NNF4 738 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 HIDE1A8MVS5 230 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 GOLGA8SH3BPF8 625 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 DYNC1I1O14576 645 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 GCM2O75603 506 aaPredicted RBP0.68□□□□□ -2.3
CCDC93-209ENST00000488908 ERLIN2O94905 339 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 C2P06681 752 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 EPB41P11171 864 aaKnown RBP0.68□□□□□ -2.3
CCDC93-209ENST00000488908 DRD5P21918 477 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 RDXP35241 583 aaKnown RBP0.68□□□□□ -2.3
CCDC93-209ENST00000488908 HRH1P35367 487 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 CEACAM6P40199 344 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 RPS11P62280 158 aaKnown RBP eCLIP0.68□□□□□ -2.3
CCDC93-209ENST00000488908 CBX1P83916 185 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 ZNF92Q03936 586 aa0.68□□□□□ -2.3
CCDC93-209ENST00000488908 MAB21L1Q13394 359 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms