RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 FMODQ06828 376 aa16.99■□□□□ 0.31
PCOLCE-208ENST00000487172 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.99■□□□□ 0.31
PCOLCE-208ENST00000487172 SLC35F1Q5T1Q4 408 aa16.99■□□□□ 0.31
PCOLCE-208ENST00000487172 LEG1Q6P5S2 330 aa16.99■□□□□ 0.31
PCOLCE-208ENST00000487172 CCDC36Q8IYA8 594 aa16.99■□□□□ 0.31
PCOLCE-208ENST00000487172 NPEPL1Q8NDH3 523 aa16.99■□□□□ 0.31
PCOLCE-208ENST00000487172 NMNAT3Q96T66 252 aa16.99■□□□□ 0.31
PCOLCE-208ENST00000487172 SLC29A1Q99808 456 aa16.99■□□□□ 0.31
PCOLCE-208ENST00000487172 TEX12Q9BXU0 123 aa16.99■□□□□ 0.31
PCOLCE-208ENST00000487172 GABARAPL3Q9BY60 117 aa16.99■□□□□ 0.31
PCOLCE-208ENST00000487172 SYT4Q9H2B2 425 aa16.99■□□□□ 0.31
PCOLCE-208ENST00000487172 OBP2BQ9NPH6 170 aa16.99■□□□□ 0.31
PCOLCE-208ENST00000487172 SLC17A5Q9NRA2 495 aa16.99■□□□□ 0.31
PCOLCE-208ENST00000487172 CMC2Q9NRP2 79 aa16.99■□□□□ 0.31
PCOLCE-208ENST00000487172 SH3D21A4FU49 640 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 SLC2A10O95528 541 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 IFNGP01579 166 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 EPXP11678 715 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 CDH2P19022 906 aaPredicted RBP16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 CRABP1P29762 137 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 NPRL3Q12980 569 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 RIPK1Q13546 671 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 SNTB1Q13884 538 aaKnown RBP16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 TAB1Q15750 504 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 TBRG1Q3YBR2 411 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 FOXL2NBQ6ZUU3 175 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 C22orf34Q6ZV56 151 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 IQCF1Q8N6M8 205 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 WDR31Q8NA23 367 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 FAM222BQ8WU58 562 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 NUAK2Q9H093 628 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 TMEM38BQ9NVV0 291 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 AMDHD2Q9Y303 409 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 UGT2A1Q9Y4X1 527 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 ORC6Q9Y5N6 252 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 FKBP7Q9Y680 259 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 LRRK2Q5S007 2527 aa16.98■□□□□ 0.31
PCOLCE-208ENST00000487172 ARPC4-TTLL3A0A0A6YYG9 625 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 OR6C68A6NDL8 312 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 ZAR1LA6NP61 321 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 KHDRBS3O75525 346 aaKnown RBP16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 THBDP07204 575 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 CTLA4P16410 223 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 NPR2P20594 1047 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 MRPS34P82930 218 aaKnown RBP16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 TRIP10Q15642 601 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 SLX4IPQ5VYV7 408 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 TMEM236Q5W0B7 351 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 DNM1P34Q6PK57 102 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 ZNF813Q6ZN06 617 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 SLC37A3Q8NCC5 494 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 SDR9C7Q8NEX9 313 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 MUCL1Q96DR8 90 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 MED18Q9BUE0 208 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 RNPEPL1Q9HAU8 725 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 ZNF226Q9NYT6 803 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 CRIM1Q9NZV1 1036 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 KCNN3Q9UGI6 736 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 SLC25A15Q9Y619 301 aa16.97■□□□□ 0.31
PCOLCE-208ENST00000487172 RIIAD1A6NNX1 92 aa16.96■□□□□ 0.31
PCOLCE-208ENST00000487172 SURF4O15260 269 aa16.96■□□□□ 0.31
PCOLCE-208ENST00000487172 SLC16A7O60669 478 aa16.96■□□□□ 0.31
PCOLCE-208ENST00000487172 COX6B1P14854 86 aa16.96■□□□□ 0.31
PCOLCE-208ENST00000487172 ZNF3P17036 446 aa16.96■□□□□ 0.31
PCOLCE-208ENST00000487172 EPHA2P29317 976 aa16.96■□□□□ 0.31
PCOLCE-208ENST00000487172 HOXC12P31275 282 aa16.96■□□□□ 0.31
PCOLCE-208ENST00000487172 SLC34A1Q06495 639 aa16.96■□□□□ 0.31
PCOLCE-208ENST00000487172 HIKESHIQ53FT3 197 aa16.96■□□□□ 0.31
PCOLCE-208ENST00000487172 ZBTB46Q86UZ6 589 aa16.96■□□□□ 0.31
PCOLCE-208ENST00000487172 SLC22A24Q8N4F4 322 aa16.96■□□□□ 0.31
PCOLCE-208ENST00000487172 PACRGLQ8N7B6 248 aa16.96■□□□□ 0.31
PCOLCE-208ENST00000487172 NSMAFQ92636 917 aa16.96■□□□□ 0.31
PCOLCE-208ENST00000487172 RACGAP1Q9H0H5 632 aa16.96■□□□□ 0.31
PCOLCE-208ENST00000487172 NKX1-2Q9UD57 310 aaPredicted RBP16.96■□□□□ 0.31
PCOLCE-208ENST00000487172 B9D1Q9UPM9 204 aa16.96■□□□□ 0.31
PCOLCE-208ENST00000487172 A0A096LPE4 126 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 A0A1W2PPZ6 126 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 E9PQ18 207 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 DCTN6O00399 190 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 CASKO14936 926 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 OR8G3PP0DMU2 310 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 CRYGSP22914 178 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 COL8A1P27658 744 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 POLR2IP36954 125 aaKnown RBP16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 SLC25A1P53007 311 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 UBE2NP61088 152 aaKnown RBP16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 CRMP1Q14194 572 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 DAZAP2Q15038 168 aaPredicted RBP16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 PPA1Q15181 289 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 ETFDHQ16134 617 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 OGFRL1Q5TC84 451 aaPredicted RBP16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 LPCAT4Q643R3 524 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 KLHL24Q6TFL4 600 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 OR6V1Q8N148 313 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 NABP1Q96AH0 204 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 RDH12Q96NR8 316 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 TSSK2Q96PF2 358 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 SLC38A2Q96QD8 506 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 PRRG3Q9BZD7 231 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 NMNAT2Q9BZQ4 307 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms