RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 MESP2Q0VG99 397 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 ZNF234Q14588 700 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 DEFB134Q4QY38 66 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 LEG1Q6P5S2 330 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 KIRREL2Q6UWL6 708 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 ZNF614Q8N883 585 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 ZNF784Q8NCA9 323 aaPredicted RBP15.99■□□□□ 0.15
RAB40C-205ENST00000539661 OR1S2Q8NGQ3 325 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 EDEM2Q9BV94 578 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 SLCO5A1Q9H2Y9 848 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 HEBP2Q9Y5Z4 205 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 LOC100289279A0A1B0GTE1 492 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 FGF16O43320 207 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 RDH16O75452 317 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 CD34P28906 385 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 BDKRB2P30411 391 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 DLSTP36957 453 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 RASGEF1BQ0VAM2 473 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 ZNF813Q6ZN06 617 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 CDC20BQ86Y33 519 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 ZNF676Q8N7Q3 588 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 OR1J4Q8NGS1 313 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 OR2G2Q8NGZ5 317 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 OR8S1Q8NH09 359 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 GPR174Q9BXC1 333 aa15.99■□□□□ 0.15
RAB40C-205ENST00000539661 A0A087WUJ7 227 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 TBC1D3IA0A087WXS9 549 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 SLC25A12O75746 678 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 SNRPNP63162 240 aaKnown RBP15.98■□□□□ 0.15
RAB40C-205ENST00000539661 ID2Q02363 134 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 MGAT2Q10469 447 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 RAB11BQ15907 218 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 MANEAQ5SRI9 462 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 JAZF1Q86VZ6 243 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 EXD3Q8N9H8 876 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 ZNF511Q8NB15 262 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 ZCCHC10Q8TBK6 192 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 DVL3Q92997 716 aaPredicted RBP15.98■□□□□ 0.15
RAB40C-205ENST00000539661 RSPRY1Q96DX4 576 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 ZNF629Q9UEG4 869 aaPredicted RBP15.98■□□□□ 0.15
RAB40C-205ENST00000539661 COLEC10Q9Y6Z7 277 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 GOLGA4Q13439 2230 aaKnown RBP15.98■□□□□ 0.15
RAB40C-205ENST00000539661 SLC17A2O00624 439 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 RAD1O60671 282 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 GPR75O95800 540 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 APEHP13798 732 aaKnown RBP15.98■□□□□ 0.15
RAB40C-205ENST00000539661 GPR85P60893 370 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 EXOSC7Q15024 291 aaKnown RBP15.98■□□□□ 0.15
RAB40C-205ENST00000539661 C3orf33Q6P1S2 294 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 DOK4Q8TEW6 326 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 HERVK_113Q902F9 699 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 FAM3DQ96BQ1 224 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 ZNF707Q96C28 371 aaPredicted RBP15.98■□□□□ 0.15
RAB40C-205ENST00000539661 MBD2Q9UBB5 411 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 KLHDC2Q9Y2U9 406 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 SPACA6W5XKT8 324 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 NUP210LQ5VU65 1888 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 MEIS3P1A6NDR6 274 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 H0YC42 278 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 P2RX6O15547 441 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 EGR3Q06889 387 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 DHRS2Q13268 280 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 FGL2Q14314 439 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 C2orf76Q3KRA6 126 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 ATPAF1Q5TC12 328 aaPredicted RBP15.98■□□□□ 0.15
RAB40C-205ENST00000539661 TMEM88Q6PEY1 159 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 NDUFAF7Q7L592 441 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 TMED4Q7Z7H5 227 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 DMBX1Q8NFW5 382 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 PDCD10Q9BUL8 212 aa15.98■□□□□ 0.15
RAB40C-205ENST00000539661 FGF17O60258 216 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 CASRP41180 1078 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 CDKN2AP42771 156 aaKnown RBP15.97■□□□□ 0.15
RAB40C-205ENST00000539661 TAF13Q15543 124 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 TSC22D1Q15714 1073 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 GUCA2BQ16661 112 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 FBXO42Q6P3S6 717 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 ABHD13Q7L211 337 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 BIVMQ86UB2 503 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 OR8K3Q8NH51 312 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 CTHRC1Q96CG8 243 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 ERVK-19Q9WJR5 959 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 TRPM6Q9BX84 2022 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 EFCAB7A8K855 629 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 SNAPINO95295 136 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 ADCYAP1P18509 176 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 RTL10Q7L3V2 364 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 OR1J2Q8NGS2 313 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 STOML3Q8TAV4 291 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 SUSD6Q92537 303 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 SMARCD2Q92925 531 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 SEH1LQ96EE3 360 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 ZDHHC4Q9NPG8 344 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 ASF1BQ9NVP2 202 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 DEC1Q9P2X7 70 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 COL4A2P08572 1712 aa15.97■□□□□ 0.15
RAB40C-205ENST00000539661 FAM171A2A8MVW0 826 aa15.96■□□□□ 0.15
RAB40C-205ENST00000539661 SULT2B1O00204 365 aa15.96■□□□□ 0.15
RAB40C-205ENST00000539661 GNB5O14775 395 aa15.96■□□□□ 0.15
RAB40C-205ENST00000539661 CD74P04233 296 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms