RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 BFARQ9NZS9 450 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 CGNQ9P2M7 1197 aaKnown RBP0.72□□□□□ -2.29
CCDC93-209ENST00000488908 CTSFQ9UBX1 484 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 ZNF391Q9UJN7 358 aa0.72□□□□□ -2.29
CCDC93-209ENST00000488908 GPATCH8Q9UKJ3 1502 aaKnown RBP0.72□□□□□ -2.29
CCDC93-209ENST00000488908 TRAV39A0A0B4J263 110 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 DNASE2O00115 360 aaPredicted RBP0.71□□□□□ -2.3
CCDC93-209ENST00000488908 UBXN8O00124 270 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 RP2O75695 350 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 SCGNO76038 276 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 TM7SF2O76062 418 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 DIRAS1O95057 198 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 RAB3DO95716 219 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 CD74P04233 296 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 FGF1P05230 155 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 GLAP06280 429 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 GAP43P17677 238 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 IL1RNP18510 177 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 SLC2A5P22732 501 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 HMGB2P26583 209 aaKnown RBP0.71□□□□□ -2.3
CCDC93-209ENST00000488908 MAPK3P27361 379 aaPredicted RBP0.71□□□□□ -2.3
CCDC93-209ENST00000488908 DCKP27707 260 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 TGFBR1P36897 503 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 QARSP47897 775 aaKnown RBP0.71□□□□□ -2.3
CCDC93-209ENST00000488908 NPBWR2P48146 333 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 CDH4P55283 916 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 ZNF616Q08AN1 781 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 SCRN3Q0VDG4 424 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 KLRB1Q12918 225 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 C1orf61Q13536 156 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 ARHGAP19Q14CB8 494 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 PON3Q15166 354 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 KLHL38Q2WGJ6 581 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 SMUG1Q53HV7 270 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 LINC00173Q6ZV60 143 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 HDDC2Q7Z4H3 204 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 TMEM135Q86UB9 458 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 PIANPQ8IYJ0 282 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 CEP112Q8N8E3 955 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 TMEM104Q8NE00 496 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 OR52H1Q8NGJ2 320 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 LILRB4Q8NHJ6 448 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 LINC01560Q8TB33 94 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 CCDC110Q8TBZ0 833 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 CTNNBL1Q8WYA6 563 aaPredicted RBP0.71□□□□□ -2.3
CCDC93-209ENST00000488908 DNAJC1Q96KC8 554 aaKnown RBP0.71□□□□□ -2.3
CCDC93-209ENST00000488908 TGM7Q96PF1 710 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 TIMM29Q9BSF4 260 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 SLC25A2Q9BXI2 301 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 UBE2ZQ9H832 354 aaPredicted RBP0.71□□□□□ -2.3
CCDC93-209ENST00000488908 DBNDD1Q9H9R9 158 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 UGT1A7Q9HAW7 530 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 UGT1A10Q9HAW8 530 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 UGT1A8Q9HAW9 530 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 ADAP2Q9NPF8 381 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 FARSBQ9NSD9 589 aaKnown RBP0.71□□□□□ -2.3
CCDC93-209ENST00000488908 FAM49BQ9NUQ9 324 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 ENOPH1Q9UHY7 261 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 LAMP5Q9UJQ1 280 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 SIGLEC9Q9Y336 463 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 TIMM10BQ9Y5J6 103 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 ADAMTS13Q76LX8 1427 aa0.71□□□□□ -2.3
CCDC93-209ENST00000488908 MSH6P52701 1360 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 RPAP1Q9BWH6 1393 aaPredicted RBP0.7□□□□□ -2.3
CCDC93-209ENST00000488908 ABCC9O60706 1549 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 IGKV1D-13A0A0B4J2D9 117 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 VGLL3A8MV65 326 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 BPY2O14599 106 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 HSD17B6O14756 317 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 PRPSAP2O60256 369 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 TOM1O60784 492 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 IDH1O75874 414 aaKnown RBP0.7□□□□□ -2.3
CCDC93-209ENST00000488908 YIF1AO95070 293 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 AK1P00568 194 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 IGHDP01880 384 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 HLA-DQA1P01909 254 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 APCSP02743 223 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 IGKV1-13P0DP09 117 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 CALM1P0DP23 149 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 CALM2P0DP24 149 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 CALM3P0DP25 149 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 DTYMKP23919 212 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 CASP14P31944 242 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 CHI3L1P36222 383 aaPredicted RBP0.7□□□□□ -2.3
CCDC93-209ENST00000488908 HSD17B2P37059 387 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 CXCL12P48061 93 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 SLC11A1P49279 550 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 PPT1P50897 306 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 OGDHQ02218 1023 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 IFT88Q13099 833 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 BAMBIQ13145 260 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 IL15RAQ13261 267 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 PLD1Q13393 1074 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 SELPLGQ14242 412 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 DMRTC1Q5HYR2 192 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 THEM4Q5T1C6 240 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 PYHIN1Q6K0P9 492 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 ZFP1Q6P2D0 407 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 PRMT9Q6P2P2 845 aa0.7□□□□□ -2.3
CCDC93-209ENST00000488908 KDM7AQ6ZMT4 941 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms