RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 PRIMA1Q86XR5 153 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 TMEM255BQ8WV15 326 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 TMEM239Q8WW34 195 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 SGTBQ96EQ0 304 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 PRRC1Q96M27 445 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 DOK1Q99704 481 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 CMTM6Q9NX76 183 aa12.46□□□□□ -0.41
CLDN11-207ENST00000486975 hCG_2039718K7EN88 272 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 DHHO43323 396 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 MGRN1O60291 552 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 RAB36O95755 333 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 IGHG1P01857 330 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 CD79AP11912 226 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 FUT1P19526 365 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 OR1E2P47887 323 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 GIPRP48546 466 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 EVX1P49640 407 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 PDLIM4P50479 330 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 DAP3P51398 398 aaKnown RBP12.45□□□□□ -0.42
CLDN11-207ENST00000486975 ZNF133P52736 654 aaPredicted RBP12.45□□□□□ -0.42
CLDN11-207ENST00000486975 RAB1AP62820 205 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 RPL18Q07020 188 aaKnown RBP12.45□□□□□ -0.42
CLDN11-207ENST00000486975 ST3GAL3Q11203 375 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 SNTB2Q13425 540 aaKnown RBP12.45□□□□□ -0.42
CLDN11-207ENST00000486975 DAG1Q14118 895 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 MELKQ14680 651 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 C8orf82Q6P1X6 216 aaPredicted RBP12.45□□□□□ -0.42
CLDN11-207ENST00000486975 VHLLQ6RSH7 139 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 SLC15A3Q8IY34 581 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 SLC22A24Q8N4F4 322 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 POU5F2Q8N7G0 328 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 PFN4Q8NHR9 129 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 LZICQ8WZA0 190 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 HOPXQ9BPY8 73 aaPredicted RBP12.45□□□□□ -0.42
CLDN11-207ENST00000486975 MRPL13Q9BYD1 178 aaKnown RBP12.45□□□□□ -0.42
CLDN11-207ENST00000486975 RAB1BQ9H0U4 201 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 TMEM38BQ9NVV0 291 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 STX18Q9P2W9 335 aaKnown RBP12.45□□□□□ -0.42
CLDN11-207ENST00000486975 MED31Q9Y3C7 131 aa12.45□□□□□ -0.42
CLDN11-207ENST00000486975 LOC390937A0A1W2PQ73 354 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 A0A1W2PRG6 482 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 TMEM129A0AVI4 362 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 BLOC1S5-TXNDC5H3BN57 136 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 NDUFAB1O14561 156 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 ATP8B1O43520 1251 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 GPRIN2O60269 458 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 SHOX2O60902 331 aaPredicted RBP12.44□□□□□ -0.42
CLDN11-207ENST00000486975 LY6HO94772 140 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 OR8G3PP0DMU2 310 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 COX4I1P13073 169 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 USF1P22415 310 aaPredicted RBP12.44□□□□□ -0.42
CLDN11-207ENST00000486975 IFNA8P32881 189 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 GLRXP35754 106 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 PTDSS1P48651 473 aaKnown RBP12.44□□□□□ -0.42
CLDN11-207ENST00000486975 PIGFQ07326 219 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 C6orf52Q5T4I8 152 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 HACD2Q6Y1H2 254 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 HIPK1Q86Z02 1210 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 SKA3Q8IX90 412 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 OFCC1Q8IZS5 231 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 NOXO1Q8NFA2 376 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 NEU4Q8WWR8 484 aaPredicted RBP12.44□□□□□ -0.42
CLDN11-207ENST00000486975 ASB10Q8WXI3 467 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 VRK1Q99986 396 aaPredicted RBP12.44□□□□□ -0.42
CLDN11-207ENST00000486975 PIMREGQ9BSJ6 248 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 SMURF2Q9HAU4 748 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 INIPQ9NRY2 104 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 C20orf141Q9NUB4 165 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 ADAM21Q9UKJ8 722 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 A4GNTQ9UNA3 340 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 HIF3AQ9Y2N7 669 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 CMAHPQ9Y471 501 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 SPEF1Q9Y4P9 236 aa12.44□□□□□ -0.42
CLDN11-207ENST00000486975 A8MV72 311 aaPredicted RBP12.43□□□□□ -0.42
CLDN11-207ENST00000486975 MCIDASD6RGH6 385 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 NME4O00746 187 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 FARS2O95363 451 aaKnown RBP12.43□□□□□ -0.42
CLDN11-207ENST00000486975 SERPINA5P05154 406 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 ERCC1P07992 297 aaPredicted RBP12.43□□□□□ -0.42
CLDN11-207ENST00000486975 QDPRP09417 244 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 NR2C1P13056 603 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 AQP2P41181 271 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 NR4A2P43354 598 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 CLRN1P58418 232 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 RPS23P62266 143 aaKnown RBP12.43□□□□□ -0.42
CLDN11-207ENST00000486975 RELBQ01201 579 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 LIPEQ05469 1076 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 TAF11Q15544 211 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 FXNQ16595 210 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 C10orf128Q5T292 105 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 ARMC4Q5T2S8 1044 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 KRT80Q6KB66 452 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 SPATA21Q7Z572 469 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 ZNF584Q8IVC4 421 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 SVOPLQ8N434 492 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 ANKS4BQ8N8V4 417 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 ZNF540Q8NDQ6 660 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 MCHR2Q969V1 340 aa12.43□□□□□ -0.42
CLDN11-207ENST00000486975 MRPL24Q96A35 216 aaKnown RBP12.43□□□□□ -0.42
CLDN11-207ENST00000486975 TPD52L3Q96J77 140 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 167.6 ms