RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 SLC22A8Q8TCC7 542 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 MARCH1Q8TCQ1 289 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 ACTRT1Q8TDG2 376 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 GIMAP1Q8WWP7 306 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 IL22RA2Q969J5 263 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 EXOSC8Q96B26 276 aaKnown RBP2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 DNAJC19Q96DA6 116 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 TSSK3Q96PN8 268 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 DNTTIP1Q9H147 329 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 NCOR1P1Q9H4R4 102 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 VPS37BQ9H9H4 285 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 PISDQ9UG56 409 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 RAB26Q9ULW5 256 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 PRG3Q9Y2Y8 225 aaPredicted RBP2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 STARD10Q9Y365 291 aa2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 CSDC2Q9Y534 153 aaKnown RBP2.97□□□□□ -1.93
SMNDC1-205ENST00000477763 MAP3K15Q6ZN16 1313 aa2.96□□□□□ -1.93
SMNDC1-205ENST00000477763 IGLV11-55A0A075B6I3 123 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 TRAV39A0A0B4J263 110 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 IGKV1D-13A0A0B4J2D9 117 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 A0A1B0GVI7 797 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 GOLGA8OA6NCC3 632 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 ZNF716A6NP11 495 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 GOLGA8NF8WBI6 632 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 CASQ2O14958 399 aaPredicted RBP2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 SS18L1O75177 396 aaPredicted RBP2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 FGGP02679 453 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 CRYGBP07316 175 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 ZNF735P0CB33 412 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 IGKV1-13P0DP09 117 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 CALM1P0DP23 149 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 CALM2P0DP24 149 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 CALM3P0DP25 149 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 ZNF24P17028 368 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 HNRNPH3P31942 346 aaKnown RBP2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 RORCP51449 518 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 ECH1Q13011 328 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 CLINT1Q14677 625 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 TSPO2Q5TGU0 170 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 AGBL2Q5U5Z8 902 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 LINC01551Q86U37 167 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 ZNF786Q8N393 782 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 LIX1Q8N485 282 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 CD300LFQ8TDQ1 290 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 CXorf40AQ8TE69 158 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 ZNF285Q96NJ3 590 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 CCDC77Q9BR77 488 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 CENPKQ9BS16 269 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 GABARAPL3Q9BY60 117 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 IFI27L2Q9H2X8 130 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 CDC42EP4Q9H3Q1 356 aaKnown RBP2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 CHMP4BQ9H444 224 aaKnown RBP2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 SLCO1B3Q9NPD5 702 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 ZNF223Q9UK11 482 aaPredicted RBP2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 CDC42BPBQ9Y5S2 1711 aa2.96□□□□□ -1.94
SMNDC1-205ENST00000477763 NFASCO94856 1347 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 IGLV3-16A0A075B6K0 115 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 ZNF726A6NNF4 738 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 PPP1R2P9O14990 202 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 SERPINB5P36952 375 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 ANP32AP39687 249 aaKnown RBP2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 CXCL5P42830 114 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 MNAT1P51948 309 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 CRISP3P54108 245 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 YWHAGP61981 247 aaKnown RBP eCLIP2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 TTLL9Q3SXZ7 439 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 Q6P435 159 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 ZYG11AQ6WRX3 759 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 EID2Q8N6I1 236 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 B3GNT7Q8NFL0 401 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 TMEM54Q969K7 222 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 CCDC126Q96EE4 140 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 PIK3IP1Q96FE7 263 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 TAAR1Q96RJ0 339 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 UGT1A7Q9HAW7 530 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 UGT1A10Q9HAW8 530 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 UGT1A8Q9HAW9 530 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 SAMSN1Q9NSI8 373 aaKnown RBP2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 NMRK1Q9NWW6 199 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 KLK12Q9UKR0 248 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 CAB39Q9Y376 341 aaPredicted RBP2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 CEMIPQ8WUJ3 1361 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 USP47Q96K76 1375 aa2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 PHF3Q92576 2039 aaKnown RBP2.95□□□□□ -1.94
SMNDC1-205ENST00000477763 CENPJQ9HC77 1338 aaPredicted RBP2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 SMCO3A2RU48 225 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 BOLA2-SMG1P6H3BVE0 249 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 KMOO15229 486 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 CT62P0C5K7 136 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 GDI1P31150 447 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 FOXN2P32314 431 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 UBE2AP49459 152 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 SSR4P51571 173 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 ENPEPQ07075 957 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 TCP10Q12799 353 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 XKR7Q5GH72 579 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 RAET1LQ5VY80 246 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 C16orf87Q6PH81 154 aa2.94□□□□□ -1.94
SMNDC1-205ENST00000477763 ABHD13Q7L211 337 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms