RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 KLHL5Q96PQ7 755 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 NEDD4LQ96PU5 975 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 SLC38A2Q96QD8 506 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 PEBP4Q96S96 227 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 CDCA3Q99618 268 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 ATG101Q9BSB4 218 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 MED18Q9BUE0 208 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 CDCA4Q9BXL8 241 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 NKX6-2Q9C056 277 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZYG11BQ9C0D3 744 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 DNTTIP1Q9H147 329 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR51M1Q9H341 326 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 SRD5A3Q9H8P0 318 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF71Q9NQZ8 489 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 HEBP1Q9NRV9 189 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 UFSP2Q9NUQ7 469 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 CLN6Q9NWW5 311 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 C2orf42Q9NWW7 574 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 NDUFB11Q9NX14 153 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 TMEM161AQ9NX61 479 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 AKAP7Q9P0M2 348 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 EPHA6Q9UF33 1036 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 PSORS1C1Q9UIG5 152 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 MGAT4BQ9UQ53 548 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 MGAMO43451 1857 aa3.87□□□□□ -1.79
HMGB1P16-201ENST00000447155 SBF1O95248 1867 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 KIF26AQ9ULI4 1882 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 IGHV4-4A0A075B6R2 117 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 TRAV18A0A075B6X5 111 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 A0A1B0GTQ1 180 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 LOC390937A0A1W2PQ73 354 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 CIB4A0PJX0 185 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 TRAPPC13A5PLN9 417 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 TRABD2BA6NFA1 517 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 MSGN1A6NI15 193 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 ASB14A6NK59 587 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 A8MXK9 166 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 DDX39AO00148 427 aaKnown RBP3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 PDCD5O14737 125 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 FPGTO14772 594 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 CASKO14936 926 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 CTDSPLO15194 276 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 FABP7O15540 132 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 AKR7A2O43488 359 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 CHST10O43529 356 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 MFSD11O43934 449 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 CRTAPO75718 401 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 RAD51DO75771 328 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 CDC123O75794 336 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 AQP8O94778 261 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 SERPINA3P01011 423 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 IFNA10P01566 189 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 APOC3P02656 99 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 CSF2P04141 144 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 ATP1B1P05026 303 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 FGF4P08620 206 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZDHHC11BP0C7U3 371 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 C8orf89P0DMQ9 161 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 PRG2P13727 222 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 ANXA8P13928 327 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 CD59P13987 128 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF250P15622 560 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 RAB3BP20337 219 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 CYP2B6P20813 491 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 WARSP23381 471 aaKnown RBP3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 PAX6P26367 422 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 CHRNB4P30926 498 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 RFC3P40938 356 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 SLC1A2P43004 574 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 HNMTP50135 292 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 GEMP55040 296 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR4D2P58180 307 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 MTPNP58546 118 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 GMFBP60983 142 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 TSPAN5P62079 268 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF33AQ06730 810 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 NPRL3Q12980 569 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 MLLT11Q13015 90 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 PLD1Q13393 1074 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 RBM39Q14498 530 aaKnown RBP3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 GLYR1Q49A26 553 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 PYCR3Q53H96 274 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 PABPC1L2AQ5JQF8 200 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 NCBP2-AS2Q69YL0 99 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 CLEC6AQ6EIG7 209 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 LAMTOR1Q6IAA8 161 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 TBPL2Q6SJ96 375 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 KDELC1Q6UW63 502 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 TMEM107Q6UX40 140 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 PAMR1Q6UXH9 720 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 C17orf107Q6ZR85 190 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 ANKRD46Q86W74 232 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 FUNDC1Q8IVP5 155 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZBTB8OSQ8IWT0 167 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 CYP4Z2PQ8N1L4 340 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 FTMTQ8N4E7 242 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 C10orf53Q8N6V4 93 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 CCNYQ8ND76 341 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR56A4Q8NGH8 313 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR52K1Q8NGK4 314 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms