RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 ZNF354BQ96LW1 612 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 RBP7Q96R05 134 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 NODALQ96S42 347 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 TRIM51Q9BSJ1 452 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 RPP25Q9BUL9 199 aaKnown RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 MRIQ9BWK5 157 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 EBF3Q9H4W6 596 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 DCLRE1BQ9H816 532 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 GNB4Q9HAV0 340 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 CCNB1IP1Q9NPC3 277 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 ZNF581Q9P0T4 197 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 HOOK1Q9UJC3 728 aaKnown RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 RAB26Q9ULW5 256 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 UTP11Q9Y3A2 253 aaKnown RBP1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 PCNX3Q9H6A9 2034 aa1.51□□□□□ -2.17
SMARCAD1-202ENST00000359052 SCN2AQ99250 2005 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 A0A0G2JN53 185 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TRBV4-1A0A0J9YWV2 114 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 LOC100506127A0A0U1RQW1 187 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 A8MXQ7 604 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 ANKRD63C9JTQ0 380 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 PLPP3O14495 311 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 CETN3O15182 167 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 FHP07954 510 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TRIM49P0CI25 452 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TRIM49CP0CI26 452 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 UQCRBP14927 111 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 DPEP1P16444 411 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 ITGA2P17301 1181 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 GPX3P22352 226 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 RBMS1P29558 406 aaKnown RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 OR3A3P47888 321 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 FBXW4P57775 412 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 IL15RAQ13261 267 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 Q3ZCU0 254 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 SLC27A4Q6P1M0 643 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TTC27Q6P3X3 843 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 CCDC137Q6PK04 289 aaKnown RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 C4orf22Q6V702 233 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 ADAMTSL5Q6ZMM2 481 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 PRR23BQ6ZRT6 265 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 ATG4DQ86TL0 474 aaPredicted RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 SERPINA11Q86U17 422 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 KLHDC9Q8NEP7 349 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 SELENOMQ8WWX9 145 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 GNB1LQ9BYB4 327 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TPSD1Q9BZJ3 242 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TRIM15Q9C019 465 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 REEP4Q9H6H4 257 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TREM1Q9NP99 234 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 MGAT4CQ9UBM8 478 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TMED7Q9Y3B3 224 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 DSPPQ9NZW4 1301 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 A0A087X002 238 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 A0A0G2JNG1 304 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 FXYD1O00168 92 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 EI24O14681 340 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 HSD17B6O14756 317 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 PLAUP00749 431 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 HCKP08631 526 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TCN1P20061 433 aaPredicted RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 HLA-DMAP28067 261 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 NUDT6P53370 316 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 RAP1AP62834 184 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 POU3F1Q03052 451 aaPredicted RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 PIGFQ07326 219 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 KIR2DS5Q14953 304 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 MRPL23Q16540 153 aaKnown RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 MS4A18Q3C1V0 323 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 CD300EQ496F6 205 aaPredicted RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TIGD2Q4W5G0 525 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 FNBP1LQ5T0N5 605 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TMEM42Q69YG0 159 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 AMIGO1Q86WK6 493 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TMEM173Q86WV6 379 aaPredicted RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TMCO5AQ8N6Q1 288 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 ADPRHL1Q8NDY3 354 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 Q8TCH9 128 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 BLOC1S5Q8TDH9 187 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 FMO2Q99518 471 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 LRRC1Q9BTT6 524 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TEKT3Q9BXF9 490 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 RANBP3Q9H6Z4 567 aaPredicted RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 ELOVL3Q9HB03 270 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 EXD2Q9NVH0 621 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 BABAM2Q9NXR7 383 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 PRODH2Q9UF12 536 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 CARHSP1Q9Y2V2 147 aaKnown RBP1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 DNAH8Q96JB1 4490 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 TSPAN11A1L157 253 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 SLC22A20A6NK97 555 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 PSMD3O43242 534 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 GPAA1O43292 621 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 XRCC3O43542 346 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 SNAI2O43623 268 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 SEMA7AO75326 666 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 OR2A4O95047 310 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 CLPTM1O96005 669 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 RPA2P15927 270 aa1.5□□□□□ -2.17
SMARCAD1-202ENST00000359052 ARR3P36575 388 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms