RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ABOP16442 354 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 HABP2Q14520 560 aaPredicted RBP16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 COL19A1Q14993 1142 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 HNRNPA1L2Q32P51 320 aaKnown RBP16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 VWA2Q5GFL6 755 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 ZNF684Q5T5D7 378 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 LPCAT3Q6P1A2 487 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 ZNF765Q7L2R6 523 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 BIVMQ86UB2 503 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 OR2A1Q8NGT9 310 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 OR6K6Q8NGW6 343 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 SLC22A8Q8TCC7 542 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 ELP5Q8TE02 316 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 PAQR8Q8TEZ7 354 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 TCEAL3Q969E4 200 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 ARL11Q969Q4 196 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 Q96M85 177 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 MNTQ99583 582 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 LGR4Q9BXB1 951 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 XKR8Q9H6D3 395 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 FBXO34Q9NWN3 711 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 TRAV8-7A0A075B6U6 113 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 A0A1B0GVT2 93 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 CCSO14618 274 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 EIF1BO60739 113 aaKnown RBP16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 NFYBP25208 207 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 CD34P28906 385 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 PRSS3P35030 304 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 EIF1P41567 113 aaKnown RBP16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 ATP1B3P54709 279 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 SCAND1P57086 179 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 TMPRSS9Q7Z410 1059 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 GTPBP8Q8N3Z3 284 aaPredicted RBP16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 PPP1R1CQ8WVI7 109 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 ARRDC3Q96B67 414 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 SEC22AQ96IW7 307 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 TMEM27Q9HBJ8 222 aa16.08■□□□□ 0.16
CDKN1B-201ENST00000228872 SCAMP1O15126 338 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 LTBRP36941 435 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 PLAURQ03405 335 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 ECH1Q13011 328 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 UNQ6126/PRO20091Q6UXV3 157 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 SLC43A2Q8N370 569 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 OR4A4PQ8NGN8 299 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 ZPLD1Q8TCW7 415 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 OR8D1Q8WZ84 308 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 SEC11CQ9BY50 192 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 TREM1Q9NP99 234 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 TRBV5-5A0A0J9YX44 114 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 MCIDASD6RGH6 385 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 RNGTTO60942 597 aaKnown RBP16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 WNT11O96014 354 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 CD79AP11912 226 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 SPI1P17947 270 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 RAB5BP61020 215 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 DHRS2Q13268 280 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 ZNF234Q14588 700 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 INPP5JQ15735 1006 aaPredicted RBP16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 LIN54Q6MZP7 749 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 LRRC25Q8N386 305 aaPredicted RBP16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 OR5AK2Q8NH90 309 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 NMNAT3Q96T66 252 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 BCL2L14Q9BZR8 327 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 TMEM231Q9H6L2 316 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 MYOZ1Q9NP98 299 aaPredicted RBP16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 NIT2Q9NQR4 276 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 FLRT3Q9NZU0 649 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 DHCR7Q9UBM7 475 aaKnown RBP16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 APOBEC3BQ9UH17 382 aaKnown RBP16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 ADAM18Q9Y3Q7 739 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 TICRRQ7Z2Z1 1910 aa16.07■□□□□ 0.16
CDKN1B-201ENST00000228872 A0A0B4J2E0 115 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 A0A1B0GX12 115 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 SSX5O60225 188 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 OR8G3PP0DMU2 310 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 NR0B2Q15466 257 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 DCST2Q5T1A1 773 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 ATPAF1Q5TC12 328 aaPredicted RBP16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 OR51D1Q8NGF3 324 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 MRPS30Q9NP92 439 aaKnown RBP16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 NOP16Q9Y3C1 178 aaKnown RBP16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 MTCH2Q9Y6C9 303 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 A0A1B0GWA3 101 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 RDH16O75452 317 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 NDUFB2O95178 105 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 RAB3DO95716 219 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 FOLR2P14207 255 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 GDI1P31150 447 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 ALKBH1Q13686 389 aaKnown RBP16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 ITPRIPL2Q3MIP1 535 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 MTSS1LQ765P7 747 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 NPEPL1Q8NDH3 523 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 GPX8Q8TED1 209 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 CCDC74AQ96AQ1 378 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 SLC25A21Q9BQT8 299 aaPredicted RBP16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 POTEKPQ9BYX7 375 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 TINAGL1Q9GZM7 467 aaPredicted RBP16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 ZDHHC4Q9NPG8 344 aa16.06■□□□□ 0.16
CDKN1B-201ENST00000228872 TMEM100Q9NV29 134 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms